Os09g0506300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os09g0506300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 103 | 0.477 | 9.23 | -0.179 | 1.18 | 0.698 | -0.792 | 0.0677 | -0.15 | 17.7 | 0.4207 | 40 | -- | -- |
| 102.98 | 0.473 | 9.23 | -0.178 | 1.19 | 0.701 | -0.786 | -- | -0.151 | 17.7 | 0.38 | 41 | -- | -- |
| 104.44 | 0.476 | 9.23 | -0.172 | 1.19 | 0.703 | -- | 0.0722 | -0.152 | 17.7 | 0.38 | 44 | -- | -- |
| 104.45 | 0.476 | 9.23 | -0.173 | 1.19 | 0.712 | -- | -- | -0.154 | 17.7 | 0.3631 | 44 | -- | -- |
| 172.28 | 0.615 | 9.22 | -0.207 | -- | 0.679 | -- | -0.093 | -0.186 | -- | 0.34 | 41 | -- | -- |
| 114.62 | 0.502 | 9.25 | -0.236 | 1.41 | -- | -0.537 | -- | -0.167 | 20.1 | -- | -- | -- | -- |
| 115.47 | 0.503 | 9.25 | -0.221 | 1.41 | -- | -- | -- | -0.168 | 20.1 | -- | -- | -- | -- |
| 171.43 | 0.612 | 9.22 | -0.206 | -- | 0.687 | -- | -- | -0.189 | -- | 0.2996 | 32 | -- | -- |
| 105.23 | 0.478 | 9.24 | -- | 1.19 | 0.717 | -- | -- | -0.141 | 17.7 | 0.3665 | 44 | -- | -- |
| 224.1 | 0.699 | 9.22 | -0.233 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 116.77 | 0.505 | 9.25 | -- | 1.41 | -- | -- | -- | -0.143 | 20.1 | -- | -- | -- | -- |
| 168.52 | 0.607 | 9.2 | -- | -- | 0.717 | -- | -- | -0.115 | -- | 0.1083 | 16 | -- | -- |
| 225.53 | 0.701 | 9.21 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 2 | 91.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 4 | 91.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 4 |
| 5 | 91.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 6 | 91.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 8 | 91.59 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 10 | 91.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 12 | 91.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 13 | 91.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 15 | 91.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 16 | 91.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 17 | 91.59 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 18 | 91.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 22 | 91.90 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 24 | 92.25 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 28 | 92.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 30 | 92.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 32 | 92.78 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 34 | 92.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 35 | 92.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 36 | 92.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 37 | 92.94 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 38 | 92.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 39 | 92.97 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 40 | 93.08 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 42 | 93.10 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 44 | 93.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 46 | 93.12 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 47 | 93.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 50 | 93.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 52 | 93.12 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 55 | 93.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 59 | 93.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 60 | 93.26 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 62 | 93.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 63 | 93.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 82 | 93.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 20 |
| 85 | 93.59 | radiation | 1.0 | 90 | > th | dose independent | sin | 11 | NA |
| 86 | 93.59 | radiation | 1.0 | 90 | < th | dose independent | sin | 11 | NA |
| 88 | 93.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 90 | 93.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 91 | 93.71 | radiation | 10.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 98 | 93.97 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 103 | 94.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 105 | 94.11 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 109 | 94.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 140 | 94.35 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 14 |
| 150 | 94.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 153 | 94.40 | wind | 3.0 | 30 | < th | dose independent | rect. | 5 | 4 |
| 160 | 94.41 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 180 | 94.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 7 |
| 236 | 94.68 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 249 | 94.71 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 4 |
| 301 | 94.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 312 | 94.93 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 20 |
| 313 | 94.93 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 333 | 95.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 15 |
| 336 | 95.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 358 | 95.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 366 | 95.12 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 402 | 95.20 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 423 | 95.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 429 | 95.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
| 431 | 95.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 474 | 95.47 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 514 | 95.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 517 | 95.64 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 518 | 95.64 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 520 | 95.64 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 20 |
| 531 | 95.69 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 594 | 95.88 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 610 | 95.94 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 659 | 96.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 660 | 96.05 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 661 | 96.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 663 | 96.06 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 675 | 96.13 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 690 | 96.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 698 | 96.21 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 704 | 96.27 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 706 | 96.28 | wind | 5.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 710 | 96.29 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 734 | 96.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 735 | 96.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 755 | 96.46 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 806 | 96.65 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 814 | 96.71 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 17 |
| 824 | 96.76 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 827 | 96.78 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 831 | 96.79 | wind | 9.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 848 | 96.82 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 862 | 96.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 864 | 96.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 865 | 96.90 | wind | 5.0 | 270 | < th | dose independent | rect. | 20 | 7 |
| 866 | 96.90 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 887 | 97.02 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 892 | 97.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 895 | 97.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 902 | 97.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 17 |
| 903 | 97.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 905 | 97.10 | humidity | 70.0 | 30 | > th | dose independent | rect. | 18 | 11 |
| 944 | 97.26 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 18 | 13 |
| 945 | 97.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 999 | 97.42 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 16 |