Os04g0479500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os04g0479500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.12 | 0.415 | 7.93 | -0.571 | 1.14 | -1.63 | 0.724 | -0.393 | 0.00195 | 15.2 | 24.51 | 750 | -- | -- |
| 78.32 | 0.412 | 7.94 | -0.638 | 1.14 | -1.59 | 0.694 | -- | -0.00783 | 15.2 | 24.49 | 755 | -- | -- |
| 79.72 | 0.416 | 7.93 | -0.581 | 1.15 | -1.64 | -- | -0.278 | 0.00504 | 15.2 | 24.35 | 789 | -- | -- |
| 79.81 | 0.416 | 7.94 | -0.628 | 1.15 | -1.6 | -- | -- | -0.00884 | 15.3 | 24.49 | 788 | -- | -- |
| 97.28 | 0.459 | 7.93 | -0.657 | -- | -2.42 | -- | -0.276 | -0.0235 | -- | 53.99 | 150 | -- | -- |
| 115.22 | 0.503 | 7.87 | -0.187 | 1.09 | -- | 0.778 | -- | 0.307 | 15.9 | -- | -- | -- | -- |
| 116.99 | 0.507 | 7.87 | -0.177 | 1.09 | -- | -- | -- | 0.311 | 15.9 | -- | -- | -- | -- |
| 97.34 | 0.46 | 7.94 | -0.697 | -- | -2.43 | -- | -- | -0.035 | -- | 57.78 | 151 | -- | -- |
| 88.81 | 0.439 | 7.91 | -- | 1.13 | -1.33 | -- | -- | 0.112 | 15.4 | 24.35 | 718 | -- | -- |
| 182.64 | 0.631 | 7.87 | -0.222 | -- | -- | -- | -- | 0.282 | -- | -- | -- | -- | -- |
| 117.81 | 0.508 | 7.86 | -- | 1.1 | -- | -- | -- | 0.331 | 15.9 | -- | -- | -- | -- |
| 109.33 | 0.487 | 7.91 | -- | -- | -2.2 | -- | -- | 0.0671 | -- | 53.85 | 146 | -- | -- |
| 183.93 | 0.633 | 7.86 | -- | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.32 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 2 | 73.78 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 22 |
| 3 | 74.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 4 | 74.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 22 | 76.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 27 | 76.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 46 | 77.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 50 | 77.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 54 | 77.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 70 | 77.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 83 | 78.05 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 85 | 78.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 98 | 78.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 108 | 78.42 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 159 | 78.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 183 | 79.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 185 | 79.18 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 207 | 79.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 265 | 79.52 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 444 | 80.08 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 462 | 80.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 528 | 80.29 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 747 | 80.90 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 847 | 81.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 976 | 81.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |