Os10g0384600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0384600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.94 | 0.21 | 3.07 | 0.18 | 0.092 | 2.01 | 0.164 | 8.59 | -0.0673 | 10.5 | 9.6 | 641 | -- | -- |
| 26.37 | 0.239 | 3.04 | 0.224 | 0.0726 | 1 | 0.401 | -- | 0.0538 | 9.77 | 9.303 | 491 | -- | -- |
| 18.79 | 0.202 | 3.08 | 0.216 | 0.0627 | 2.64 | -- | 11.6 | -0.0387 | 10.7 | 10.35 | 606 | -- | -- |
| 23 | 0.223 | 3.04 | 0.107 | 0.0838 | 0.353 | -- | -- | -0.0578 | 8.96 | 9.841 | 463 | -- | -- |
| 18.89 | 0.202 | 3.08 | 0.239 | -- | 2.74 | -- | 12.7 | -0.0679 | -- | 10.4 | 611 | -- | -- |
| 23.35 | 0.227 | 3.04 | 0.0727 | 0.0661 | -- | 0.175 | -- | -0.0645 | 10.4 | -- | -- | -- | -- |
| 23.45 | 0.227 | 3.04 | 0.0789 | 0.0696 | -- | -- | -- | -0.0646 | 9.26 | -- | -- | -- | -- |
| 23.17 | 0.224 | 3.04 | 0.104 | -- | 0.437 | -- | -- | -0.0542 | -- | 10 | 373 | -- | -- |
| 23.07 | 0.224 | 3.04 | -- | 0.0814 | 0.442 | -- | -- | -0.0654 | 8.79 | 10.1 | 373 | -- | -- |
| 23.73 | 0.228 | 3.04 | 0.0786 | -- | -- | -- | -- | -0.0643 | -- | -- | -- | -- | -- |
| 23.62 | 0.227 | 3.04 | -- | 0.0696 | -- | -- | -- | -0.0734 | 9.17 | -- | -- | -- | -- |
| 23.44 | 0.225 | 3.04 | -- | -- | 0.397 | -- | -- | -0.0665 | -- | 10.1 | 377 | -- | -- |
| 23.9 | 0.228 | 3.04 | -- | -- | -- | -- | -- | -0.073 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.82 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 17.85 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 21 | 2 |
| 4 | 17.86 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 3 |
| 35 | 17.94 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 22 | 3 |
| 40 | 17.95 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 19 | 3 |
| 41 | 17.96 | wind | 1 | 270 | < th | dose independent | rect. | 19 | 1 |
| 44 | 17.96 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 17 | 9 |
| 45 | 17.96 | wind | 1 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 51 | 17.96 | wind | 9 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 77 | 17.98 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 18 | 8 |
| 83 | 17.98 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 123 | 18.02 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 1 |
| 145 | 18.02 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 175 | 18.06 | wind | 9 | 720 | > th | dose independent | rect. | 17 | 1 |
| 186 | 18.08 | wind | 7 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 200 | 18.10 | wind | 9 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 252 | 18.21 | wind | 9 | 720 | > th | dose dependent | sin | 13 | NA |
| 475 | 18.53 | atmosphere | 1000 | 30 | > th | dose independent | sin | 12 | NA |
| 495 | 18.57 | atmosphere | 1000 | 30 | < th | dose independent | sin | 12 | NA |
| 591 | 18.80 | wind | 7 | 720 | > th | dose independent | rect. | 14 | 1 |
| 651 | 18.97 | wind | 9 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 752 | 19.23 | atmosphere | 1000 | 10 | < th | dose dependent | sin | 11 | NA |
| 761 | 19.25 | wind | 9 | 720 | < th | dose independent | sin | 12 | NA |
| 772 | 19.27 | wind | 9 | 720 | > th | dose independent | rect. | 14 | 4 |
| 779 | 19.30 | wind | 9 | 720 | > th | dose independent | sin | 12 | NA |
| 837 | 19.42 | wind | 9 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 958 | 19.61 | wind | 7 | 1440 | < th | dose independent | rect. | 13 | 2 |