Os05g0571700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os05g0571700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.99 | 0.199 | 11.9 | -0.15 | 0.416 | 0.978 | 0.0522 | -1.34 | 0.0887 | 18.1 | 17.68 | 97 | -- | -- |
| 19.36 | 0.205 | 11.9 | 0.074 | 0.407 | 1 | -0.353 | -- | 0.159 | 17.5 | 15.72 | 120 | -- | -- |
| 17.98 | 0.197 | 11.9 | -0.148 | 0.412 | 0.977 | -- | -1.32 | 0.0914 | 18 | 17.68 | 105 | -- | -- |
| 19.6 | 0.206 | 11.9 | 0.0682 | 0.407 | 0.991 | -- | -- | 0.154 | 17.9 | 16.32 | 112 | -- | -- |
| 24.09 | 0.229 | 11.9 | -0.238 | -- | 1.26 | -- | -1.34 | 0.0351 | -- | 18 | 215 | -- | -- |
| 30.71 | 0.26 | 11.8 | 0.289 | 0.681 | -- | -0.365 | -- | 0.307 | 16.7 | -- | -- | -- | -- |
| 31.04 | 0.261 | 11.8 | 0.287 | 0.68 | -- | -- | -- | 0.305 | 16.8 | -- | -- | -- | -- |
| 25.6 | 0.236 | 11.9 | -0.0113 | -- | 1.25 | -- | -- | 0.0983 | -- | 17.1 | 232 | -- | -- |
| 19.71 | 0.207 | 11.9 | -- | 0.403 | 1.04 | -- | -- | 0.144 | 18 | 15.72 | 111 | -- | -- |
| 55.49 | 0.348 | 11.8 | 0.262 | -- | -- | -- | -- | 0.287 | -- | -- | -- | -- | -- |
| 33.21 | 0.27 | 11.8 | -- | 0.675 | -- | -- | -- | 0.273 | 16.8 | -- | -- | -- | -- |
| 25.61 | 0.236 | 11.9 | -- | -- | 1.24 | -- | -- | 0.101 | -- | 17.2 | 232 | -- | -- |
| 57.3 | 0.353 | 11.8 | -- | -- | -- | -- | -- | 0.258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 3 | 16.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 11 | 17.19 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 14 | 17.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 18 | 17.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 27 | 17.69 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 43 | 18.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 62 | 18.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 67 | 18.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 69 | 18.38 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 88 | 18.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 90 | 18.61 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 99 | 18.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 106 | 18.67 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 114 | 18.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 118 | 18.75 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 120 | 18.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 125 | 18.77 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 137 | 18.85 | temperature | 15 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 139 | 18.85 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 142 | 18.86 | temperature | 15 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 167 | 18.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 176 | 18.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 177 | 18.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 179 | 18.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 267 | 19.03 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 356 | 19.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 357 | 19.17 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 457 | 19.28 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 540 | 19.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 559 | 19.36 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 603 | 19.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 672 | 19.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 16 |
| 890 | 19.49 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |