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Os01g0774200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.62 (0.0346) R2 : 0.0193
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.218 (0.0728) R2dN8 : 0.025 R2N8 : 0.0193
σ : 0.651
deviance : 194.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
164.59 0.603 5.83 -0.811 0.396 8.13 0.0358 -40.2 -0.121 17.7 999.9 951 -- --
169.15 0.61 5.61 0.401 0.381 1.18 -0.107 -- -0.12 18.2 999.9 951 -- --
164.55 0.597 5.83 -0.792 0.395 8.1 -- -40 -0.118 17.7 999.8 955 -- --
165.25 0.599 5.61 0.405 0.419 1.69 -- -- -0.14 17.9 997 1168 -- --
172.61 0.612 5.84 -0.89 -- 8.89 -- -44.6 -0.132 -- 999.6 978 -- --
180.59 0.63 5.62 0.494 0.387 -- -0.0731 -- -0.156 18.1 -- -- -- --
180.6 0.629 5.62 0.495 0.386 -- -- -- -0.156 18 -- -- -- --
174.01 0.614 5.61 0.417 -- 1.59 -- -- -0.138 -- 996.8 1169 -- --
170.01 0.607 5.62 -- 0.408 1.77 -- -- -0.174 17.9 997.1 1174 -- --
188.34 0.641 5.61 0.484 -- -- -- -- -0.165 -- -- -- -- --
187.06 0.64 5.63 -- 0.379 -- -- -- -0.211 18.1 -- -- -- --
178.57 0.622 5.62 -- -- 1.68 -- -- -0.183 -- 996.8 1166 -- --
194.51 0.651 5.62 -- -- -- -- -- -0.218 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 159.64 atmosphere 1000 10 < th dose independent rect. 6 2
2 159.65 atmosphere 1000 10 < th dose dependent rect. 6 2
5 159.71 temperature 25 4320 > th dose dependent rect. 24 3
6 159.74 atmosphere 1010 30 < th dose dependent rect. 8 1
8 159.96 temperature 25 270 > th dose independent rect. 3 5
9 160.00 atmosphere 1000 90 < th dose dependent rect. 6 1
11 160.01 atmosphere 1000 90 < th dose independent rect. 6 1
35 160.29 temperature 25 90 > th dose independent rect. 3 8
42 160.79 temperature 20 270 > th dose dependent rect. 7 1
46 160.94 temperature 25 4320 > th dose independent rect. 2 1
48 161.24 atmosphere 995 14400 > th dose independent rect. 12 3
49 161.35 wind 1 10 > th dose independent rect. 23 12
52 161.58 atmosphere 995 1440 > th dose independent rect. 15 21
54 161.67 atmosphere 995 14400 > th dose independent rect. 12 8
58 161.79 wind 1 14400 > th dose independent rect. 1 2
60 161.83 temperature 25 30 > th dose independent rect. 1 10
65 161.94 temperature 25 270 > th dose independent rect. 7 1
66 161.94 atmosphere 995 14400 > th dose independent rect. 10 10
71 162.01 atmosphere 1000 720 < th dose dependent rect. 20 12
73 162.05 atmosphere 995 14400 > th dose independent rect. 12 5
76 162.09 atmosphere 1000 1440 < th dose dependent rect. 22 10
86 162.25 temperature 25 30 > th dose independent rect. 7 4
89 162.26 atmosphere 995 14400 > th dose independent rect. 10 5
95 162.31 atmosphere 995 14400 < th dose independent rect. 15 4
99 162.31 atmosphere 1000 720 < th dose dependent sin 10 NA
102 162.36 temperature 10 720 > th dose dependent rect. 3 6
103 162.37 atmosphere 995 1440 > th dose independent rect. 13 23
108 162.40 temperature 25 4320 > th dose independent rect. 24 4
156 162.51 atmosphere 1000 1440 < th dose dependent rect. 7 1
163 162.55 wind 1 10 > th dose independent rect. 19 16
172 162.61 atmosphere 1000 1440 < th dose dependent rect. 23 4
176 162.63 temperature 25 720 > th dose independent rect. 15 7
180 162.64 atmosphere 995 14400 > th dose independent rect. 14 6
198 162.68 temperature 25 10 > th dose independent rect. 7 2
199 162.68 atmosphere 995 14400 > th dose independent rect. 18 2
203 162.69 atmosphere 995 14400 < th dose dependent rect. 15 4
215 162.72 temperature 20 270 > th dose dependent rect. 4 5
218 162.73 atmosphere 1000 720 > th dose independent rect. 18 9
231 162.80 atmosphere 995 1440 > th dose independent rect. 15 10
239 162.83 atmosphere 1000 720 < th dose dependent rect. 17 15
251 162.89 atmosphere 1000 30 > th dose independent rect. 11 20
260 162.90 atmosphere 1000 1440 < th dose dependent rect. 24 1
268 162.96 wind 1 14400 < th dose dependent rect. 2 1
269 162.96 atmosphere 995 14400 < th dose dependent rect. 17 2
287 163.02 atmosphere 995 4320 < th dose dependent rect. 17 13
342 163.13 atmosphere 995 4320 > th dose independent sin 9 NA
345 163.13 atmosphere 995 4320 < th dose dependent rect. 18 7
347 163.14 atmosphere 995 14400 > th dose independent rect. 16 1
362 163.20 atmosphere 995 4320 < th dose independent sin 8 NA
401 163.29 temperature 25 4320 < th dose independent rect. 1 1
405 163.31 atmosphere 1000 1440 < th dose dependent rect. 4 1
416 163.35 temperature 25 720 < th dose independent rect. 15 9
424 163.38 atmosphere 995 4320 < th dose dependent sin 11 NA
426 163.38 temperature 20 10 > th dose dependent rect. 7 2
436 163.42 temperature 25 4320 < th dose independent rect. 1 3
438 163.42 atmosphere 995 1440 > th dose independent rect. 13 12
441 163.43 atmosphere 1000 30 > th dose independent rect. 9 22
457 163.48 temperature 25 4320 < th dose independent rect. 3 1
458 163.48 wind 1 14400 < th dose independent rect. 1 2
460 163.48 temperature 25 720 > th dose dependent rect. 15 16
466 163.52 temperature 25 720 > th dose dependent rect. 15 13
520 163.82 temperature 20 10 > th dose dependent rect. 7 4
540 163.87 temperature 25 720 < th dose independent rect. 24 11
544 163.89 temperature 25 720 < th dose independent rect. 1 9
548 163.90 atmosphere 1000 270 < th dose dependent rect. 3 5
561 163.97 temperature 25 270 > th dose dependent rect. 1 7
597 164.11 atmosphere 995 4320 > th dose independent rect. 18 12
598 164.11 atmosphere 995 4320 > th dose independent rect. 18 14
603 164.13 atmosphere 995 1440 > th dose independent rect. 8 17
621 164.17 wind 1 10 > th dose independent rect. 21 14
677 164.34 temperature 25 720 < th dose independent rect. 13 18
682 164.38 wind 1 10 > th dose independent rect. 14 21
698 164.44 atmosphere 995 4320 < th dose independent rect. 18 12
710 164.46 temperature 20 720 > th dose dependent rect. 16 5
712 164.47 temperature 25 720 > th dose dependent sin 13 NA
715 164.48 atmosphere 995 1440 > th dose independent rect. 8 19
771 164.72 wind 1 10 > th dose independent rect. 12 23
776 164.74 atmosphere 1000 30 > th dose independent rect. 11 23
777 164.74 wind 5 10 < th dose dependent rect. 20 11
786 164.77 atmosphere 1005 30 > th dose independent rect. 24 7
787 164.77 atmosphere 995 1440 > th dose independent rect. 15 15
795 164.79 atmosphere 995 1440 > th dose independent rect. 4 21
818 164.88 atmosphere 995 1440 > th dose independent rect. 4 23
828 164.91 atmosphere 995 1440 > th dose independent rect. 1 14
862 164.98 temperature 20 30 > th dose dependent rect. 17 10
867 165.00 atmosphere 995 1440 > th dose independent sin 14 NA
888 165.05 temperature 25 720 < th dose independent sin 15 NA
891 165.05 atmosphere 995 1440 > th dose independent rect. 13 17
920 165.12 wind 3 30 < th dose dependent rect. 22 9
940 165.18 temperature 25 10 > th dose dependent rect. 1 10
943 165.19 atmosphere 995 1440 > th dose independent rect. 8 22
981 165.29 wind 3 10 < th dose dependent rect. 24 7
983 165.30 wind 5 30 < th dose independent rect. 7 4