FiT-DB / Search/ Help/ Sample detail

Os02g0105600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.46 (0.0295) R2 : 0.334
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.947 (0.0913) R2dC : 0.248 R2C : -0.168
β3 : -1.11 (0.0748) R2dE : 0.504 R2E : 0.0852
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0791 (0.0623) R2dN8 : 0.00368 R2N8 : -0.00403
σ : 0.553
deviance : 141.05
__
_____
C
peak time of C : 21
E
wheather : radiation
threshold : 40.02
memory length : 95
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 13.3
open length of G : 19.1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139.74 0.555 6.46 -0.213 0.96 -1.12 0.108 0.0172 0.0655 21 40.18 97 13.2 19.2
139.74 0.551 6.46 -0.213 0.959 -1.12 0.125 -- 0.0649 21 40.1 95 13.2 19.2
139.77 0.551 6.46 -0.205 0.959 -1.12 -- 0.0675 0.0681 21 40.08 97 13.2 19.2
139.79 0.551 6.46 -0.217 0.959 -1.12 -- -- 0.0644 21 40.02 95 13.2 19.2
176.11 0.618 6.43 -0.233 -- -0.628 -- 0.0452 0.0695 -- 58.33 57 13.8 19.3
175.74 0.621 6.46 -0.25 0.769 -- 0.765 -- -0.0149 16.1 -- -- -- --
177.41 0.624 6.46 -0.241 0.773 -- -- -- -0.0107 16.1 -- -- -- --
172.35 0.611 6.43 -0.264 -- -0.666 -- -- 0.0892 -- 34.34 65 13.8 19.4
141.05 0.553 6.46 -- 0.947 -1.11 -- -- 0.0791 21 40.02 95 13.3 19.1
209.94 0.677 6.46 -0.273 -- -- -- -- -0.0313 -- -- -- -- --
178.94 0.626 6.45 -- 0.778 -- -- -- 0.0162 16.1 -- -- -- --
173.11 0.613 6.43 -- -- -0.661 -- -- 0.0852 -- 34.54 67 13.6 19.6
211.91 0.679 6.45 -- -- -- -- -- -0.000991 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 141.58 radiation 40.0 90 < th dose independent rect. 13 19
2 142.26 radiation 1.0 10 > th dose independent rect. 9 6
4 143.20 temperature 10.0 10 > th dose independent rect. 9 6
6 143.20 atmosphere 995.0 10 > th dose independent rect. 9 6
7 143.20 atmosphere 1015.0 10 < th dose independent rect. 9 6
8 143.20 precipitation 0.1 10 < th dose independent rect. 9 6
9 143.20 temperature 10.0 10 > th dose independent rect. 15 18
10 143.20 precipitation 0.1 10 < th dose dependent rect. 9 6
19 143.75 wind 9.0 10 < th dose independent rect. 9 6
22 143.84 temperature 10.0 1440 > th dose independent rect. 10 6
25 143.84 temperature 10.0 1440 > th dose independent rect. 16 18
31 144.12 wind 9.0 10 < th dose independent rect. 15 18
35 144.20 precipitation 0.1 10 < th dose independent rect. 15 18
36 144.20 precipitation 0.1 10 < th dose dependent rect. 15 18
43 144.33 wind 1.0 30 > th dose independent rect. 9 6
48 144.45 wind 7.0 10 < th dose independent rect. 2 7
49 144.45 radiation 40.0 10 < th dose independent rect. 15 18
51 144.50 temperature 10.0 10 > th dose independent rect. 2 7
53 144.50 temperature 30.0 10 < th dose independent rect. 2 7
54 144.50 humidity 50.0 10 > th dose independent rect. 2 7
56 144.50 atmosphere 995.0 10 > th dose independent rect. 2 7
57 144.50 atmosphere 1015.0 10 < th dose independent rect. 2 7
58 144.50 temperature 10.0 10 > th dose independent rect. 9 17
59 144.73 wind 9.0 10 < th dose independent rect. 9 17
66 144.90 precipitation 0.1 270 < th dose independent rect. 9 1
77 144.90 precipitation 0.1 270 < th dose dependent rect. 9 1
78 144.92 temperature 10.0 270 > th dose independent rect. 9 1
79 144.92 atmosphere 995.0 270 > th dose independent rect. 9 1
80 144.92 atmosphere 1015.0 270 < th dose independent rect. 9 1
81 144.92 temperature 10.0 270 > th dose independent rect. 10 23
83 144.97 atmosphere 995.0 10 > th dose independent rect. 9 17
84 144.98 wind 9.0 270 < th dose independent rect. 9 1
86 145.00 humidity 90.0 10 < th dose independent rect. 9 6
89 145.07 humidity 50.0 270 > th dose independent rect. 9 1
92 145.16 temperature 10.0 1440 > th dose independent rect. 3 7
95 145.16 atmosphere 995.0 1440 > th dose independent rect. 3 7
97 145.16 temperature 10.0 1440 > th dose independent rect. 10 17
106 145.26 precipitation 0.1 30 < th dose independent rect. 2 7
107 145.26 precipitation 0.1 30 < th dose dependent rect. 2 7
109 145.30 radiation 40.0 10 < th dose independent rect. 12 21
120 145.45 precipitation 0.1 10 < th dose independent rect. 9 17
121 145.45 precipitation 0.1 10 < th dose dependent rect. 9 17
125 145.56 temperature 10.0 10 > th dose dependent rect. 9 6
143 145.77 radiation 40.0 30 < th dose independent rect. 2 7
144 145.85 atmosphere 995.0 10 > th dose independent rect. 15 18
151 146.02 temperature 10.0 10 > th dose dependent rect. 2 7
152 146.05 radiation 1.0 270 > th dose independent rect. 9 1
176 146.23 wind 1.0 270 > th dose independent rect. 9 1
214 146.53 radiation 40.0 90 < th dose independent rect. 3 16
222 146.69 atmosphere 1015.0 10 < th dose independent rect. 15 18
240 146.85 humidity 50.0 10 > th dose independent rect. 15 18
255 146.91 radiation 1.0 270 > th dose dependent rect. 8 2
258 146.93 precipitation 0.1 270 < th dose independent rect. 10 22
259 146.93 precipitation 0.1 270 < th dose dependent rect. 10 22
266 146.97 wind 1.0 30 > th dose independent rect. 9 18
267 146.98 temperature 10.0 270 > th dose dependent rect. 9 1
293 147.21 radiation 40.0 90 < th dose dependent rect. 13 19
303 147.26 radiation 1.0 90 > th dose dependent rect. 8 6
305 147.29 radiation 20.0 270 < th dose independent rect. 23 9
322 147.45 wind 9.0 270 < th dose independent rect. 10 22
348 147.55 wind 9.0 270 < th dose dependent rect. 8 2
361 147.66 radiation 40.0 90 < th dose dependent rect. 3 16
364 147.70 humidity 50.0 30 > th dose independent rect. 9 6
372 147.77 atmosphere 1015.0 10 < th dose independent rect. 9 17
374 147.78 radiation 20.0 90 < th dose independent rect. 3 16
408 148.11 radiation 10.0 270 < th dose independent rect. 17 9
409 148.12 wind 1.0 270 > th dose independent rect. 12 7
417 148.20 wind 1.0 270 > th dose independent rect. 11 9
420 148.21 radiation 40.0 270 < th dose dependent rect. 1 7
450 148.38 wind 9.0 90 < th dose dependent rect. 2 6
457 148.44 temperature 10.0 270 > th dose independent rect. 11 9
458 148.44 atmosphere 1015.0 270 < th dose independent rect. 11 9
459 148.44 temperature 10.0 270 > th dose independent rect. 20 15
460 148.44 atmosphere 995.0 270 > th dose independent rect. 20 15
464 148.47 wind 7.0 270 < th dose independent rect. 23 9
468 148.51 radiation 30.0 270 < th dose dependent rect. 17 9
470 148.52 temperature 10.0 270 > th dose independent rect. 12 7
472 148.52 atmosphere 1015.0 270 < th dose independent rect. 12 7
473 148.52 temperature 10.0 270 > th dose independent rect. 19 17
474 148.52 atmosphere 995.0 270 > th dose independent rect. 19 17
484 148.60 precipitation 0.1 270 < th dose independent rect. 11 9
485 148.60 precipitation 0.1 270 < th dose dependent rect. 11 9
487 148.62 precipitation 0.1 270 < th dose independent rect. 23 9
489 148.62 precipitation 0.1 270 < th dose dependent rect. 23 9
490 148.63 wind 9.0 270 < th dose independent rect. 17 9
503 148.67 temperature 10.0 270 > th dose independent rect. 17 9
504 148.67 temperature 10.0 270 > th dose independent rect. 23 9
505 148.67 temperature 30.0 270 < th dose independent rect. 23 9
506 148.67 humidity 50.0 270 > th dose independent rect. 23 9
508 148.67 atmosphere 995.0 270 > th dose independent rect. 23 9
512 148.67 temperature 10.0 270 > th dose independent rect. 2 15
513 148.67 temperature 10.0 270 > th dose independent rect. 8 15
514 148.67 atmosphere 1015.0 270 < th dose independent rect. 2 15
515 148.69 humidity 50.0 270 > th dose independent rect. 20 15
516 148.72 radiation 40.0 270 < th dose dependent rect. 23 9
538 148.83 wind 9.0 270 < th dose independent rect. 20 15
543 148.86 wind 9.0 270 < th dose independent rect. 19 17
545 148.87 precipitation 0.1 270 < th dose independent rect. 20 15
547 148.87 precipitation 0.1 270 < th dose dependent rect. 20 15
555 148.94 wind 9.0 270 < th dose independent rect. 8 15
559 148.95 atmosphere 995.0 1440 > th dose independent rect. 10 4
564 148.97 precipitation 0.1 270 < th dose independent rect. 2 15
566 148.97 precipitation 0.1 270 < th dose dependent rect. 2 15
582 149.07 precipitation 0.1 270 < th dose independent rect. 6 7
583 149.07 humidity 50.0 270 > th dose independent rect. 19 17
584 149.07 precipitation 0.1 270 < th dose dependent rect. 6 7
590 149.08 atmosphere 1015.0 1440 < th dose independent rect. 4 6
596 149.09 temperature 10.0 270 > th dose independent rect. 6 7
597 149.09 atmosphere 995.0 270 > th dose independent rect. 6 7
598 149.09 atmosphere 1015.0 270 < th dose independent rect. 6 7
600 149.10 wind 9.0 270 < th dose independent rect. 12 7
619 149.21 wind 9.0 270 < th dose independent rect. 6 7
620 149.21 temperature 10.0 10 > th dose dependent rect. 15 18
640 149.28 humidity 90.0 270 < th dose independent rect. 9 1
660 149.33 wind 9.0 270 < th dose independent rect. 11 9
664 149.34 humidity 50.0 270 > th dose independent rect. 17 9
668 149.35 radiation 1.0 10 > th dose dependent rect. 9 6
682 149.37 atmosphere 995.0 90 > th dose dependent rect. 2 6
697 149.50 wind 9.0 270 < th dose independent rect. 2 15
722 149.59 humidity 50.0 1440 > th dose independent rect. 3 7
723 149.59 atmosphere 1015.0 270 < th dose independent rect. 23 9
724 149.60 atmosphere 995.0 270 > th dose independent rect. 18 8
725 149.60 precipitation 0.1 270 < th dose independent rect. 8 15
726 149.60 precipitation 0.1 270 < th dose dependent rect. 8 15
755 149.63 atmosphere 995.0 10 > th dose dependent rect. 2 7
795 149.74 wind 1.0 30 > th dose independent rect. 2 7
836 149.83 wind 9.0 1440 < th dose independent rect. 3 6
857 149.88 radiation 40.0 90 < th dose independent rect. 13 7
865 149.90 humidity 90.0 270 < th dose independent rect. 8 3
867 149.90 temperature 30.0 270 < th dose dependent rect. 3 2
870 149.92 atmosphere 995.0 90 > th dose dependent rect. 8 19
914 150.05 humidity 50.0 90 > th dose independent rect. 8 19
915 150.06 wind 1.0 90 > th dose independent rect. 3 5
930 150.13 precipitation 0.1 270 < th dose independent rect. 17 9
931 150.13 precipitation 0.1 270 < th dose dependent rect. 17 9
933 150.14 atmosphere 1015.0 270 < th dose dependent rect. 12 7
978 150.25 humidity 50.0 270 > th dose independent rect. 6 7
997 150.30 radiation 40.0 10 < th dose independent rect. 3 17