BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0758200 Os01g0758200|AK071083
(211 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0758200 Similar to Dof2 (Fragment) 302 9e-83
AB028133 202 2e-52
Os01g0263900 Zinc finger, Dof-type family protein 117 7e-27
Os03g0169600 Zinc finger, Dof-type family protein 115 3e-26
Os07g0685000 Similar to Dof3 gene (Fragment) 110 5e-25
Os01g0277500 Similar to Dof3 gene (Fragment) 108 4e-24
Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-bi... 107 5e-24
Os03g0764900 Similar to Zn finger protein (Fragment) 102 2e-22
Os08g0490100 Similar to PBF protein 100 6e-22
Os07g0236700 Similar to Dof2 (Fragment) 99 2e-21
Os09g0475800 Similar to Zn finger protein (Fragment) 97 7e-21
Os07g0508900 Zinc finger, Dof-type family protein 96 1e-20
Os02g0707200 Similar to Zn finger protein (Fragment) 96 2e-20
Os03g0821200 Similar to Zn finger protein (Fragment) 96 2e-20
Os03g0585600 95 3e-20
Os12g0569900 Similar to Zn finger protein (Fragment) 94 6e-20
Os12g0590700 94 7e-20
Os05g0112200 Similar to Zn finger protein (Fragment) 94 7e-20
Os01g0193300 94 8e-20
Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-bi... 94 8e-20
Os03g0276300 94 9e-20
Os05g0440000 Zinc finger, Dof-type family protein 93 2e-19
Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-bi... 92 2e-19
Os06g0284500 Zinc finger, Dof-type family protein 91 5e-19
Os01g0673700 91 9e-19
Os03g0619100 Zinc finger, Dof-type family protein 90 1e-18
Os02g0252400 Similar to Zn finger protein (Fragment) 88 4e-18
Os02g0673700 Zinc finger, Dof-type family protein 87 1e-17
Os04g0678400 Zinc finger, Dof-type family protein 81 5e-16
Os10g0496000 Zinc finger, Dof-type family protein 75 4e-14
>Os01g0758200 Similar to Dof2 (Fragment)
Length = 211
Score = 302 bits (774), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 155/211 (73%)
Query: 1 MLSHVEMAPAAGGFKLFGKVIMQCGVSEGTQDKAQGFXXXXXXXXXXXXXXXXXXXXXXX 60
MLSHVEMAPAAGGFKLFGKVIMQCGVSEGTQDKAQGF
Sbjct: 1 MLSHVEMAPAAGGFKLFGKVIMQCGVSEGTQDKAQGFVVAREKVEPEEEEEEEQRVPAAA 60
Query: 61 TSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRSRDTK 120
TSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDS PLPCPRCRSRDTK
Sbjct: 61 TSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRSRDTK 120
Query: 121 FCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPLGPLXXXXXXXXXXXXX 180
FCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPLGPL
Sbjct: 121 FCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPLGPLAVAHHNHHHRAAA 180
Query: 181 GFVLGFXXXXXXXXXXXVYTDRWPVTPDRPF 211
GFVLGF VYTDRWPVTPDRPF
Sbjct: 181 GFVLGFPNPSSPTSPSPVYTDRWPVTPDRPF 211
>AB028133
Length = 235
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 107/151 (70%), Gaps = 4/151 (2%)
Query: 1 MLSHVEMA----PAAGGFKLFGKVIMQCGVSEGTQDKAQGFXXXXXXXXXXXXXXXXXXX 56
M S V M+ +AG FGKVIMQCGVSEGTQDKAQGF
Sbjct: 4 MCSDVSMSFFFHRSAGLLGEFGKVIMQCGVSEGTQDKAQGFVVAREKVEPEEEEEEEQRV 63
Query: 57 XXXXTSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRS 116
TSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDS PLPCPRCRS
Sbjct: 64 PAAATSGQRASIKREAADRDEEQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRS 123
Query: 117 RDTKFCYFNNYNVNQPRHFCKACHRYWTAGG 147
RDTKFCYFNNYNVNQPRHFCKACHRYWTAGG
Sbjct: 124 RDTKFCYFNNYNVNQPRHFCKACHRYWTAGG 154
>Os01g0263900 Zinc finger, Dof-type family protein
Length = 496
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 10/101 (9%)
Query: 63 GQRASIKREAA-DRDEEQRQGGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRSRDTKF 121
GQ +++ +AA D +E + D +GQ + D LPCPRC S DTKF
Sbjct: 67 GQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKI---------LPCPRCNSMDTKF 117
Query: 122 CYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
CY+NNYNVNQPRHFCK C RYWTAGG +RNVPVGAGRRK++
Sbjct: 118 CYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
>Os03g0169600 Zinc finger, Dof-type family protein
Length = 440
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 66/94 (70%), Gaps = 10/94 (10%)
Query: 72 AADRDE-EQRQGGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRSRDTKFCYFNNYNVN 130
+AD++ E +Q GD A Q + + D LPCPRC S DTKFCY+NNYN+N
Sbjct: 77 SADKNSSENQQQQGDTANQKEKLKKPDKI---------LPCPRCSSMDTKFCYYNNYNIN 127
Query: 131 QPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPL 164
QPRHFCK C RYWTAGGA+RNVPVGAGRRK++ +
Sbjct: 128 QPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSV 161
>Os07g0685000 Similar to Dof3 gene (Fragment)
Length = 476
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 51/54 (94%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
LPCPRC S DTKFCY+NNYN+NQPRHFCK+C RYWTAGG++RN+PVGAGRRK++
Sbjct: 108 LPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRYWTAGGSMRNLPVGAGRRKSK 161
>Os01g0277500 Similar to Dof3 gene (Fragment)
Length = 490
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
LPCPRC S +TKFCYFNNYNV+QPRHFC+ C RYWTAGGA+RNVPVGAGRR+N+
Sbjct: 114 LPCPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRNK 167
>Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 194
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 67 SIKREAADRDEEQRQGGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRSRDTKFCYFNN 126
S + E D + + GG A+ Q Q+ ++ LPCPRC S DTKFCYFNN
Sbjct: 58 SPRSEVVDGESPPQPGGEAASHQQQQKEMKLKKPDKI-----LPCPRCSSMDTKFCYFNN 112
Query: 127 YNVNQPRHFCKACHRYWTAGGALRNVPVGAG 157
YNVNQPRHFCK C RYWTAGGA+RNVPVGAG
Sbjct: 113 YNVNQPRHFCKHCQRYWTAGGAMRNVPVGAG 143
>Os03g0764900 Similar to Zn finger protein (Fragment)
Length = 359
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 47/57 (82%)
Query: 108 PLPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNRPL 164
PL CPRC S +TKFCY+NNYN+ QPRHFCK C RYWT GGALRNVP+G G RK RP+
Sbjct: 78 PLRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPRPM 134
>Os08g0490100 Similar to PBF protein
Length = 276
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 43/52 (82%)
Query: 110 PCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKN 161
PCPRC SRDTKFCY+NNYN +QPRHFCK C RYWT GG LRNVPVG G RK
Sbjct: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRKK 113
>Os07g0236700 Similar to Dof2 (Fragment)
Length = 332
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 54/81 (66%)
Query: 82 GGGDAAGQPTQRRLQDSXXXXXXXXXPLPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHR 141
GGG ++ +P + L CPRC S +TKFCYFNNY++ QPRHFCKAC R
Sbjct: 26 GGGASSARPVSMAERARMAKIPQPEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRR 85
Query: 142 YWTAGGALRNVPVGAGRRKNR 162
YWT GGALRNVPVG G R+N+
Sbjct: 86 YWTRGGALRNVPVGGGFRRNK 106
>Os09g0475800 Similar to Zn finger protein (Fragment)
Length = 230
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 40/50 (80%), Positives = 44/50 (88%)
Query: 110 PCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRR 159
PCPRC SRDTKFCY+NNYN +QPRHFCK+C RYWT GG+LRNVPVG G R
Sbjct: 43 PCPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSR 92
>Os07g0508900 Zinc finger, Dof-type family protein
Length = 359
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
L CPRC S +TKFCY+NNY+++QPRHFCKAC RYWT GG LRNVPVG G RKN+
Sbjct: 49 LRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNK 102
>Os02g0707200 Similar to Zn finger protein (Fragment)
Length = 281
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 108 PLPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
PL CPRC S TKFCY+NNY+++QPR+FCK C RYWT GG+LRNVPVG G RKN+
Sbjct: 36 PLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNK 90
>Os03g0821200 Similar to Zn finger protein (Fragment)
Length = 414
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
L CPRC S +TKFCYFNNY+++QPRHFCK C RYWT GGALRNVPVG G R+N+
Sbjct: 118 LKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNK 171
>Os03g0585600
Length = 371
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
L CPRC S +TKFCY+NNY+++QPRHFCK C RYWT GGALRNVPVG G RKN+
Sbjct: 48 LRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNK 101
>Os12g0569900 Similar to Zn finger protein (Fragment)
Length = 348
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 46/53 (86%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKN 161
L CPRC S +TKFCYFNNY+++QPRHFCKAC RYWT GGALRNVPVG G R+N
Sbjct: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRN 146
>Os12g0590700
Length = 265
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 38/50 (76%), Positives = 42/50 (84%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRK 160
CPRC SRDTKFCY+NNYN QPRHFC+AC RYWT GG+LRNVP+G RK
Sbjct: 53 CPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRK 102
>Os05g0112200 Similar to Zn finger protein (Fragment)
Length = 290
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKN 161
L CPRC S +TKFCYFNNY+++QPRHFC+AC RYWT GGALRNVPVG G R++
Sbjct: 40 LKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRH 92
>Os01g0193300
Length = 215
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 43/52 (82%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRK 160
L CPRC S +TKFCY+NNYN+ QPRHFCKAC RYWT GGALRNVPVG G R
Sbjct: 30 LACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTRN 81
>Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 282
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
CPRC S +TKFCY+NNYN++QPRHFCK+C RYWT GG LRNVPVG G RK +
Sbjct: 47 CPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTK 98
>Os03g0276300
Length = 403
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
L CPRC S +TKFCY+NNY+++QPRHFCK C RYWT GG+LRNVPVG G R+N+
Sbjct: 91 LKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRNK 144
>Os05g0440000 Zinc finger, Dof-type family protein
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
CPRC S +TKFCY+NNY+++QPR+FCK C RYWT GG+LRNVPVG G RKNR
Sbjct: 40 CPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNR 91
>Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 320
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 45/52 (86%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
CPRC S +TKFCY+NNY+++QPR+FCK C RYWT GG+LRNVPVG G RKNR
Sbjct: 27 CPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNR 78
>Os06g0284500 Zinc finger, Dof-type family protein
Length = 289
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAG 157
CPRC S +TKFCY+NNYN++QPRHFCKAC RYWT GG LRNVPVG G
Sbjct: 32 CPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGG 78
>Os01g0673700
Length = 175
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 40/45 (88%)
Query: 108 PLPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNV 152
PLPCPRC SR+TKFCYFNNYNV QPRH C++C RYWTAGGALR V
Sbjct: 83 PLPCPRCGSRETKFCYFNNYNVRQPRHLCRSCRRYWTAGGALRRV 127
>Os03g0619100 Zinc finger, Dof-type family protein
Length = 202
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 40/45 (88%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVG 155
CPRC S DTKFCY+NNYN +QPRHFC+AC RYWT GG+LRNVP+G
Sbjct: 51 CPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIG 95
>Os02g0252400 Similar to Zn finger protein (Fragment)
Length = 373
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
CPRC S TKFCY+NNY++ QPR+FC+ C RYWT GG+LRNVPVG G RK++
Sbjct: 47 CPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSK 98
>Os02g0673700 Zinc finger, Dof-type family protein
Length = 375
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 109 LPCPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAG 157
L CPRC S +TKFCY+NNY++ QPR+FCK C RYWT GG+LRNVPVG G
Sbjct: 74 LNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 122
>Os04g0678400 Zinc finger, Dof-type family protein
Length = 207
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 39/44 (88%)
Query: 111 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPV 154
CPRCRS +TKFCY+NNY+ +QPRHFC+AC RYWT GG LR+VPV
Sbjct: 52 CPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPV 95
>Os10g0496000 Zinc finger, Dof-type family protein
Length = 247
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 114 CRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
C S +TKFCY+NNY+ QPR+ CKAC R+WT GG LR+VPVG GR+ ++
Sbjct: 83 CGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSK 131
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,386,761
Number of extensions: 222718
Number of successful extensions: 724
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 722
Number of HSP's successfully gapped: 30
Length of query: 211
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 115
Effective length of database: 12,023,257
Effective search space: 1382674555
Effective search space used: 1382674555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)