BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0546100 Os01g0546100|J100044E11
(212 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0546100 Protein of unknown function DUF6, transmembran... 354 2e-98
Os01g0546400 Protein of unknown function DUF6, transmembran... 240 4e-64
Os07g0524900 Protein of unknown function DUF6, transmembran... 164 6e-41
Os07g0527000 Conserved hypothetical protein 126 1e-29
Os05g0106200 Protein of unknown function DUF6, transmembran... 113 1e-25
AK105841 113 1e-25
Os01g0207700 Protein of unknown function DUF6, transmembran... 103 8e-23
Os12g0518200 Protein of unknown function DUF6, transmembran... 99 3e-21
Os01g0207900 Protein of unknown function DUF6, transmembran... 97 7e-21
Os05g0409500 Similar to MtN21 protein 92 3e-19
Os01g0117900 Similar to Nodulin-like protein 5NG4 87 7e-18
Os05g0493800 Similar to MtN21 nodulin protein-like 84 7e-17
Os05g0106300 Protein of unknown function DUF6, transmembran... 84 1e-16
Os02g0114050 Protein of unknown function DUF6, transmembran... 83 2e-16
Os04g0422300 Protein of unknown function DUF6, transmembran... 82 2e-16
Os12g0133200 81 5e-16
Os01g0297700 Protein of unknown function DUF6, transmembran... 77 1e-14
Os02g0103500 Protein of unknown function DUF6, transmembran... 70 1e-12
Os10g0210500 Protein of unknown function DUF6, transmembran... 70 2e-12
Os02g0331400 66 1e-11
Os02g0103600 Protein of unknown function DUF6, transmembran... 66 1e-11
Os06g0109200 Protein of unknown function DUF6, transmembran... 66 2e-11
>Os01g0546100 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 212
Score = 354 bits (909), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 183/212 (86%), Positives = 183/212 (86%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT
Sbjct: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
APPLSYKILLKLFVHALYGIAGSVNI N MGME
Sbjct: 61 APPLSYKILLKLFVHALYGIAGSVNIYGLGLSYSSATSSSAISNLLPVLAFFLAVLMGME 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAW 180
SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAW
Sbjct: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAW 180
Query: 181 TSGIFLTVLSTTSWALWTVLQVWIFRRATLKC 212
TSGIFLTVLSTTSWALWTVLQVWIFRRATLKC
Sbjct: 181 TSGIFLTVLSTTSWALWTVLQVWIFRRATLKC 212
>Os01g0546400 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 344
Score = 240 bits (613), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/201 (61%), Positives = 141/201 (70%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
MG R VVAF IRS+YGG+QIVTK AFN GMST+VFVFYRH IAILFLVPVAFV+ERKT
Sbjct: 1 MGTRAAFVVAFLIRSLYGGMQIVTKFAFNEGMSTSVFVFYRHVIAILFLVPVAFVLERKT 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
APPL++K+ LKLF+HALYGI+G++NI N M ME
Sbjct: 61 APPLTFKVSLKLFLHALYGISGAINIYSLGLSYASATSSSAIFNLLPAVAFILALLMKME 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAW 180
SLNLKRI+GIAKV GV+ IVGVIILAFYQGPELKS N HL + V +T++ W
Sbjct: 121 SLNLKRINGIAKVSGVVLCIVGVIILAFYQGPELKSFNHHHLFRTSTVYAAATSHPATTW 180
Query: 181 TSGIFLTVLSTTSWALWTVLQ 201
GIFLT LSTT WALWTVLQ
Sbjct: 181 ILGIFLTTLSTTCWALWTVLQ 201
>Os07g0524900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 363
Score = 164 bits (414), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 115/203 (56%), Gaps = 2/203 (0%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVE--R 58
MGN +V IR IY G+ I+TK +FN G STTVFVFYRHA+A +FL+P A+ +E +
Sbjct: 1 MGNGKVYATVVLIRLIYAGMHILTKASFNEGASTTVFVFYRHAVAAIFLLPFAYFLEIRK 60
Query: 59 KTAPPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMG 118
K APPL++++ K+FVH YG+AG++N+ N
Sbjct: 61 KQAPPLTFRLSAKIFVHGFYGMAGTINLYSIGLNYASATSSSAIFNIVPVVAFILAVMFR 120
Query: 119 MESLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTK 178
ME+LNLK HG+AK G+L I GVI+LA YQGPE KSLN L + A++ K
Sbjct: 121 METLNLKSTHGMAKASGILLCIGGVIVLALYQGPEFKSLNHHQLLHHASAAAAAAAHSKK 180
Query: 179 AWTSGIFLTVLSTTSWALWTVLQ 201
W GIFL S W+ WTV Q
Sbjct: 181 NWALGIFLMTTSVVIWSFWTVKQ 203
>Os07g0527000 Conserved hypothetical protein
Length = 288
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 104/205 (50%), Gaps = 45/205 (21%)
Query: 1 MGNREVLVVA--FFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVER 58
MGN + A IR +Y G+ +++K+A ++GMS VFVFYRH A L L+P ++ER
Sbjct: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSAALVLIPAVLILER 60
Query: 59 KTAPPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMG 118
A ++ KI K+FVHALYGI
Sbjct: 61 PKAKQVTLKIAAKMFVHALYGI-------------------------------------- 82
Query: 119 MESLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHL---SSRNVVPTGSTAY 175
ES+ LK++HG K G+LF + GV +LAFYQGP L S N HL ++ + P G+ A+
Sbjct: 83 -ESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGN-AH 140
Query: 176 TTKAWTSGIFLTVLSTTSWALWTVL 200
+ W GIFL LS LWTVL
Sbjct: 141 SKTQWVLGIFLITLSNVLAGLWTVL 165
>Os05g0106200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 384
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
M ++ V+A I+ IY G+ +V+K AF++GM+T VF+FYR A A L L+P+A ++ER+
Sbjct: 1 MDGKKPYVIAIIIQVIYTGLYVVSKAAFDQGMNTFVFIFYRQAAATLLLLPLAIILERRN 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
AP +S ++ KLF++AL G ++N+ N + +E
Sbjct: 61 APAMSLRLFTKLFMYALLGNTITMNMYNVSLKYTSATVASATSNSVPVVTFFLAVLLRLE 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYT-TKA 179
+ L+ + G+AK GV + GV+++A Y GP + LN S V S+ T T+A
Sbjct: 121 VIRLRTLSGVAKAAGVALCLAGVLVIALYAGPAISPLNHHRALSGGVHGAESSVGTGTRA 180
Query: 180 -WTSGIFLTVLSTTSWALWTVLQVWIFRR 207
W G FL +LS T+W+LW VLQ + +
Sbjct: 181 RWMKGTFLMLLSNTTWSLWIVLQASLLKE 209
>AK105841
Length = 384
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
M ++ V+A I+ IY G+ +V+K AF++GM+T VF+FYR A A L L+P+A ++ER+
Sbjct: 1 MDGKKPYVIAIIIQVIYTGLYVVSKAAFDQGMNTFVFIFYRQAAATLLLLPLAIILERRN 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
AP +S ++ KLF++AL G ++N+ N + +E
Sbjct: 61 APAMSLRLFTKLFMYALLGNTITMNMYNVSLKYTSATVASATSNSVPVVTFFLAVLLRLE 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYT-TKA 179
+ L+ + G+AK GV + GV+++A Y GP + LN S V S+ T T+A
Sbjct: 121 VIRLRTLSGVAKAAGVALCLAGVLVIALYAGPAISPLNHHRALSGGVHGAESSVGTGTRA 180
Query: 180 -WTSGIFLTVLSTTSWALWTVLQVWIFRR 207
W G FL +LS T+W+LW VLQ + +
Sbjct: 181 RWMKGTFLMLLSNTTWSLWIVLQASLLKE 209
>Os01g0207700 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 372
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 104/200 (52%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
M ++ +A I+ IY G+ +VTK AFN G +T +F+FYR A A L L+P+A ++ERK
Sbjct: 1 MDAKKPYFIAIIIQVIYTGLFVVTKAAFNHGTNTFIFIFYRQAAASLLLLPLAIILERKN 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
APP+S ++ KLF++AL G S N+ + + +E
Sbjct: 61 APPMSIRLFAKLFLYALLGNTISFNLYNTGLKYTSSTVASAAASSVPVLTFFFAVLLRLE 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAW 180
+ L+R+ G+AKV GV + GV+++A Y GP L LN S A T W
Sbjct: 121 VIRLRRLSGVAKVAGVGLCLGGVLVIALYSGPALSPLNHHRAFGGGAESGSSGAATRARW 180
Query: 181 TSGIFLTVLSTTSWALWTVL 200
+G L +LS +W+LW VL
Sbjct: 181 VTGTLLMLLSNVTWSLWIVL 200
>Os12g0518200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 373
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 9 VAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKI 68
VA ++ IY G+ +++K AFN GM+T +F+FYR A+ L L+P A + + ++ +
Sbjct: 11 VAIIVQLIYTGMFVISKAAFNHGMNTYIFIFYRQAVGSLILLPAALLQRKSARQVMTLGV 70
Query: 69 LLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIH 128
L+KLF AL GI VN+ + + E + L+
Sbjct: 71 LIKLFFCALIGITLGVNLYHVSLKFTSATVASAVDSSLPAITFFLAVLLRTEYVKLRSSS 130
Query: 129 GIAKVFGVLFSIVGVIILAFYQGPELKSLN-----LQHLSSRNVVPTGSTAYTTKAWTSG 183
GIAKV V + GV +AF+ GP + +N S+NVVP G W
Sbjct: 131 GIAKVTSVALCLAGVFTIAFFTGPSISPINHHRAFASDAGSKNVVPRG-------VWIKW 183
Query: 184 IFLTVLSTTSWALWTVLQ 201
FL V++ W+LW + Q
Sbjct: 184 TFLMVIANMCWSLWIIFQ 201
>Os01g0207900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 384
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
M ++ V+ I+ I G+ +++K AFN GM+T VF+FYR A A L L+P+A V+ER+
Sbjct: 1 MDAKKPYVIVIVIQLINTGLFVISKAAFNHGMNTFVFIFYRQAAASLLLLPLAIVLERRN 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXX---------X 111
APP+S ++ KLF++AL G S+N+ N
Sbjct: 61 APPMSLRLFTKLFLYALLGNTLSLNMYNLGLKYTSPTVASATTNSIPVVTFFFALLLRRA 120
Query: 112 XXXXXMGMESLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQH--LSSRNVVP 169
+ +E + LK + G AK+ GV+ + GV+ +A Y GP + +N
Sbjct: 121 QSIIHLWVEVIRLKSLSGAAKMAGVVLCVGGVLAIALYAGPAISPVNHHRAFGGGGGGGH 180
Query: 170 TGSTAYTTKAWTSGIFLTVLSTTSWALWTVLQVWIFRR 207
++A T W G L +LS +W+LWTVL + R
Sbjct: 181 ESASATTRTRWVKGTLLMLLSNATWSLWTVLMASLLRE 218
>Os05g0409500 Similar to MtN21 protein
Length = 420
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Query: 17 YGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHA 76
Y G+ ++TK++ N GMS V V YRHA A L + P A V+ERK P +S+ + L++FV A
Sbjct: 36 YAGMNVITKVSLNHGMSHYVLVVYRHAFATLSIAPFALVLERKVRPRMSFWVFLQIFVLA 95
Query: 77 LYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGV 136
L G N N ME +NLK+ +AKV G
Sbjct: 96 LLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIFRMEKVNLKKARCVAKVVGT 155
Query: 137 LFSIVGVIILAFYQGPELKSLNLQHLSSRNV-VPTGSTAYTTKAWTSGIFLTVLSTTSWA 195
L ++ G +++ Y+G ++ + +H+ + A K W G +++T +WA
Sbjct: 156 LVTVAGAMLMTLYKGRAVEMVWTKHMHLHGPHQDAVAAAAADKDWLRGSIFLIIATLAWA 215
Query: 196 LWTVLQVWIFRR 207
+LQ +R
Sbjct: 216 SLFILQAATLKR 227
>Os01g0117900 Similar to Nodulin-like protein 5NG4
Length = 374
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 19 GVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHALY 78
G IV++ A N G+S VF+ YR+ I++ L P A+ +E+K PPL++ +L++ F+ AL
Sbjct: 30 GFHIVSRAALNMGISKIVFIVYRNLISLALLAPFAYFLEKKDRPPLTFSLLVEFFLLALC 89
Query: 79 GIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGVLF 138
GI + N + +E ++L + HG+AKV G +
Sbjct: 90 GITANQGFYLLGLYHLSPTYASAIQNTVPAITFAMAAVLRLEQVDLGKRHGVAKVVGTVV 149
Query: 139 SIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAWTSGIFLTVLSTTSWALWT 198
SI G ++ Y+G L + NL S S++ WT G + SW+ W
Sbjct: 150 SIGGATVITLYKGLPLFNHNLNIKSL-------SSSSLILNWTLGCVFILGHCLSWSGWM 202
Query: 199 VLQVWIFRR 207
VLQV + +R
Sbjct: 203 VLQVPVLKR 211
>Os05g0493800 Similar to MtN21 nodulin protein-like
Length = 404
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 17 YGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHA 76
Y G+ ++TK++ N GMS V V YRHA A + + P A ++ERK P +++ I ++F+ A
Sbjct: 25 YAGMNVITKVSLNHGMSHYVLVVYRHAFATISIAPFALILERKVRPKMTWSIFFQIFILA 84
Query: 77 LYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGV 136
L G N N ME L LK++ AK+ G
Sbjct: 85 LLGPVIDQNFYYAGLKFTGPTFACAMSNILPAMTFVMAVIFRMEKLELKKVRCQAKIAGT 144
Query: 137 LFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAY--TTKAWTSGIFLTVLSTTSW 194
L ++ G +++ Y+GP ++ +H + + A + + W G +++T +W
Sbjct: 145 LVTVAGAMLMTLYKGPLMEMAWSRHAGAGVAEAPAAAAAAISGRDWFLGSMFVIVATLAW 204
Query: 195 ALWTVLQVWIFRR 207
A +LQ ++
Sbjct: 205 ASLFILQTHTIKQ 217
>Os05g0106300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 331
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 1 MGNREVLVVAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKT 60
M ++ V+A I+ IY G+ +VTK AF+ GM+T VF+FYR A A L L+P+A ++ERK
Sbjct: 1 MEEKKPYVIAMLIQVIYAGMFVVTKAAFDEGMNTFVFIFYRQAAATLLLLPLALLLERKN 60
Query: 61 APPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGME 120
A +S +L+KLF A G S+N+ N ME
Sbjct: 61 ARSMSLMLLIKLFFCAFIGNTFSLNLYNVSMKFTSATVASAASNSLPVITFFLALITRME 120
Query: 121 SLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLN-LQHLSSRNVVPTGSTAYTT 177
+ ++ GIAK+ GV GV++LA Y+GP L L+ ++ +V ++T
Sbjct: 121 CVKVRSSSGIAKLAGVALCFAGVMVLALYKGPALNPAAVLREFPNKMLVTAAQCVFST 178
>Os02g0114050 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 386
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 1/191 (0%)
Query: 17 YGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHA 76
Y G +V+++A + G+S VF YR+ IA+ L P A+ +E+K P ++ + ++ F A
Sbjct: 31 YAGFHVVSRLALDMGVSKLVFPVYRNLIALFLLAPFAYFLEKKERPAMTASLAVQFFFLA 90
Query: 77 LYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGV 136
L GI + N + +E + L G+AKV G
Sbjct: 91 LCGITANQGFYLLGLENTSPTFASAIQNSVPAITFAMAAALRIERVRLSSRDGLAKVAGT 150
Query: 137 LFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAWTSGIFLTVLSTTSWAL 196
L + G ++ ++GP + + + H + + A K+WT G + SW+
Sbjct: 151 LLCVAGASVITLFKGPAIFNTHHNHQPQPQQLAV-AVAAGNKSWTLGCVFLLGHCVSWSG 209
Query: 197 WTVLQVWIFRR 207
W VLQ + +R
Sbjct: 210 WLVLQAPVLKR 220
>Os04g0422300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 374
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Query: 25 KIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHALYGIAGSV 84
K+A N GM TV + R IA LFL P+A+ ERKT P L+ +IL+ LF A+ G + +
Sbjct: 28 KMALNEGMHATVLITLRQLIATLFLAPIAYFRERKTRPKLTAEILVYLFFSAVLGASLTQ 87
Query: 85 NIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGVLFSIVGVI 144
+ N G+E +NL I GIAKV G + G +
Sbjct: 88 WLFFLGLQYTTATFACAFINMTPIFTFLVALPYGLEKVNLN-IAGIAKVGGTVLGFSGAM 146
Query: 145 ILAFYQGPELKSLNLQH---------LSSRNVVPTGSTAYTTKAWTSGIFLTVLSTTSWA 195
+LA YQGP L L+ ++S V+ G + W G + + W+
Sbjct: 147 VLALYQGPSLTKLSSSSSSSSSSSSPMASAAVIAAGHVGGAHR-WAIGSVALLGGSACWS 205
Query: 196 LWTVLQVWIFRR 207
LW +LQ I R+
Sbjct: 206 LWFILQSRIARK 217
>Os12g0133200
Length = 294
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 9 VAFFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKI 68
VA ++ IY G+ +++K AFN GM+ +FVFYR A+ L L+P A + R P ++ +
Sbjct: 11 VAIVVQLIYTGMFVISKAAFNHGMNIYIFVFYRQAVGSLILLPAALLQRRSARPAMTLGV 70
Query: 69 LLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIH 128
L+KLF AL GI VN+ E + L+
Sbjct: 71 LIKLFFCALIGITLGVNLYHDRT----------------------------EYVKLRSSS 102
Query: 129 GIAKVFGVLFSIVGVIILAFYQGPELKSLN-----LQHLSSRNVVPTG 171
GIAKV V + GV + F+ GP + +N SS+ VVP G
Sbjct: 103 GIAKVTSVALCLAGVFTIVFFTGPSISPINHHRAFASDTSSKTVVPRG 150
>Os01g0297700 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 378
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 1 MGNREVLVVAFFIRSI-YGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERK 59
MG + +A + + + G+ +V+K+A + GMS V + YR+ IA +FL P A+ ERK
Sbjct: 1 MGRESLPTLAMVMVQLGFAGMNVVSKLALDTGMSPYVLIAYRNIIAAVFLAPFAYYFERK 60
Query: 60 TAPPLSYKILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGM 119
+ ++ K+L+++F +++G + + N M
Sbjct: 61 SGMVITKKVLVQIFFSSIFGATLNQVLYFVGLKSTTPTVACALSNTLPALTFAMAAAFRM 120
Query: 120 ESLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELK--SLNLQHLSSRNVVPTGSTAYTT 177
ES+ L G AKVFG + + G +I+ FY+GP L+ + + + + +
Sbjct: 121 ESVRLSAAAGQAKVFGTVVCVGGSMIMPFYKGPLLRLWASPIHWRFAESAASGAAAPAAG 180
Query: 178 KAWTSGIFLTVLSTTSWALWTVLQVWIFRR 207
A G L +LS +WA+W ++Q + R
Sbjct: 181 GAAVLGDVLIILSCAAWAVWFIIQTKMSER 210
>Os02g0103500 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 342
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 25 KIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHALYGIAGSV 84
K A +G++ V + R +A LFL P+A+ ER T P ++++I + LF AL G S
Sbjct: 29 KKALEQGLNRLVLITLRQLVATLFLSPIAYFKERNTRPKMTWEIFVYLFFSALLGAGLSQ 88
Query: 85 NIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGVLFSIVGVI 144
N +G+ESLN+K + G AKV G L S+ GV+
Sbjct: 89 YSFFYGLQYTTATYAITFANLSPVLTFLIAIALGVESLNMKSMAGGAKVLGTLTSMAGVL 148
Query: 145 ILAFYQGPELKS----LNLQHLSSRNVVPTGSTAYTTKAWTSGIFLTVLSTTSWALWTVL 200
+L+ Y+G L + S+ K WT G + + + ++LW +L
Sbjct: 149 LLSLYKGVALTNHPSAAAAMDASAGGGHGGSVMVKNNKQWTLGTVMLLGNCLCFSLWLLL 208
Query: 201 Q 201
Q
Sbjct: 209 Q 209
>Os10g0210500 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 364
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 3/195 (1%)
Query: 12 FIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLK 71
F++ + G+ +++ + +GMS V V YR+A+A + + P A ERKT P ++ + K
Sbjct: 18 FLQFGFAGLFLISVASLRQGMSHYVLVVYRNAVAAVVMAPFALWFERKTRPKMTLSVFFK 77
Query: 72 LFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIA 131
+ L N N + ME +++K A
Sbjct: 78 IMALGLLEPVLDQNFFYMGAKNTSASFSSALTNILPAVTFVNAIILRMERISIKERRSQA 137
Query: 132 KVFGVLFSIVGVIILAFYQGPELKSLNLQHLSSRNVVPTGSTAYTTKAWTSGIFLTVLST 191
K+ G L ++ G +++ ++GP +N + N + S+ + W GIF+ +LS
Sbjct: 138 KIAGTLITVGGAMLMILFKGP---VINFPWTKNANHNISDSSDHNNGHWLMGIFMILLSC 194
Query: 192 TSWALWTVLQVWIFR 206
W+ + +LQ + R
Sbjct: 195 FCWSAFFILQSYTLR 209
>Os02g0331400
Length = 284
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 14 RSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLF 73
+ G IV++ A N G+S VF YR+ IA+ L+P A+ +E+K PPL++ +L +LF
Sbjct: 18 QCCLAGFHIVSRAALNMGISKIVFTVYRNCIALALLIPFAYFLEKKNRPPLTFSLLAQLF 77
Query: 74 VHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKV 133
A GI + N + +E +N+ + +G+AKV
Sbjct: 78 FLAFCGITCNQGFYLLGLHYLSPTYASAIQNTVPAITFALAASLRLEQVNINKRYGMAKV 137
Query: 134 FG 135
G
Sbjct: 138 IG 139
>Os02g0103600 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 353
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 8 VVAFFI-RSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSY 66
VVA + +++ + + K A G++ VF+ R +A + L P+A+ ER T P +
Sbjct: 10 VVAMLVFDTLFALMTALVKKALADGLNHVVFITLRQFVAAVLLAPIAYFKERNTRPRFTT 69
Query: 67 KILLKLFVHALYGIAGSVNIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKR 126
+I +F+ AL G + + N + +E+++++
Sbjct: 70 EIFAYMFMSALLGGLCAQYLFFLGLSYTTATLTATFSNMTPVFTFLIAIPLQLETVDVRS 129
Query: 127 IHGIAKVFGVLFSIVGVIILAFYQGPEL--KSLNLQHLSSRNVVPTGSTAYTTKAWTSGI 184
G+AKV G L S+ G +L Y+G L + ++Q ++ + + S++ + + W G
Sbjct: 130 KAGLAKVIGTLMSVGGATLLGLYKGAALTHTTSSVQEHGAKGIT-SNSSSISKERWMLGS 188
Query: 185 FLTVLSTTSWALWTVLQ 201
L VL+ S++LW +LQ
Sbjct: 189 VLLVLNCISFSLWMLLQ 205
>Os06g0109200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 358
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 11/188 (5%)
Query: 25 KIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVERKTAPPLSYKILLKLFVHALYGIAGSV 84
K A G+ V + R +A +FL P+A+ ER P L+ +IL+ LF A G A S
Sbjct: 31 KKALAEGLDRLVLITLRQLVATIFLAPIAYFKERGKRPKLTLEILVYLFFSAALGAALSQ 90
Query: 85 NIXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXMGMESLNLKRIHGIAKVFGVLFSIVGVI 144
N + +ESLN+K G AK+ G L S GV+
Sbjct: 91 YTFFYGLQYTTATFAITFTNMSPVITFLIAALLRVESLNMKNKAGAAKIIGTLMSFAGVM 150
Query: 145 ILAFYQGPEL-----KSLNLQHLSSRNVVPTGSTAYTTKAWTSGIFLTVLSTTSWALWTV 199
+L Y+G L S++ H + P + K+WT G + + ++ W +
Sbjct: 151 LLTLYKGVALTHQVVSSVSSDHHHAEIEEP------SKKSWTLGTVALLANCLCFSFWLL 204
Query: 200 LQVWIFRR 207
LQ + ++
Sbjct: 205 LQTKLTKK 212
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.140 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,442,903
Number of extensions: 166229
Number of successful extensions: 664
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 631
Number of HSP's successfully gapped: 27
Length of query: 212
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 115
Effective length of database: 11,971,043
Effective search space: 1376669945
Effective search space used: 1376669945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 154 (63.9 bits)