Os07g0527000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0527000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 479.08 | 1.03 | 1.67 | 24.6 | 0.82 | -25.1 | 1.46 | 257 | -0.222 | 7.35 | 30.14 | 790 | 18.1 | 3.26 |
| 721.34 | 1.26 | 4.37 | -0.0726 | 1.53 | 0.622 | 2.85 | -- | -0.483 | 6.1 | 30.14 | 790 | 18.1 | 3.26 |
| 484.69 | 1.03 | 1.65 | 24.7 | 0.822 | -25.3 | -- | 258 | -0.227 | 7.18 | 30.16 | 792 | 18.1 | 0.724 |
| 573.63 | 1.12 | 4.37 | 0.0544 | 1.41 | 2.09 | -- | -- | -0.28 | 6.86 | 29.31 | 784 | 18 | 3.08 |
| 519.1 | 1.06 | 1.59 | 25.4 | -- | -25.9 | -- | 265 | -0.167 | -- | 30.15 | 797 | 18.1 | 14.3 |
| 722.1 | 1.26 | 4.38 | -0.0667 | 1.52 | -- | 2.82 | -- | -0.487 | 6.1 | -- | -- | -- | -- |
| 741.44 | 1.28 | 4.38 | -0.0407 | 1.53 | -- | -- | -- | -0.498 | 5.97 | -- | -- | -- | -- |
| 611.39 | 1.15 | 4.28 | -0.362 | -- | 2.85 | -- | -- | -0.0781 | -- | 26.9 | 691 | 18.5 | 3.88 |
| 562.75 | 1.1 | 4.3 | -- | 1.09 | 2.25 | -- | -- | -0.173 | 7.46 | 27.59 | 701 | 18.3 | 5.16 |
| 863.01 | 1.37 | 4.41 | 0.00448 | -- | -- | -- | -- | -0.463 | -- | -- | -- | -- | -- |
| 741.49 | 1.27 | 4.38 | -- | 1.53 | -- | -- | -- | -0.494 | 5.98 | -- | -- | -- | -- |
| 549.29 | 1.09 | 4.32 | -- | -- | 3.24 | -- | -- | -0.137 | -- | 28.25 | 688 | 20 | 6.85 |
| 863.01 | 1.37 | 4.41 | -- | -- | -- | -- | -- | -0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 487.41 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 494.49 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 16 | 495.58 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 32 | 505.39 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 33 | 507.95 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 34 | 513.12 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 36 | 534.48 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 37 | 535.45 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 39 | 536.35 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 50 | 538.49 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 64 | 539.01 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 65 | 539.36 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 66 | 539.63 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 79 | 543.35 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 110 | 549.68 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 111 | 550.38 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 112 | 550.61 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 157 | 556.54 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 158 | 557.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 183 | 567.31 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 204 | 570.82 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 215 | 572.75 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 238 | 577.25 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 255 | 577.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 257 | 578.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 260 | 578.57 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 264 | 579.14 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 14 |
| 267 | 579.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 11 |
| 273 | 579.92 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 274 | 579.98 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 278 | 580.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 312 | 582.07 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 334 | 582.91 | wind | 1.0 | 30 | < th | dose independent | rect. | 4 | 7 |
| 343 | 583.51 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 364 | 584.59 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 368 | 585.04 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 371 | 585.18 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 373 | 585.28 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 374 | 585.28 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 382 | 585.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 385 | 585.36 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 389 | 585.36 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 394 | 585.36 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 477 | 588.46 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 495 | 589.09 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 539 | 590.56 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 8 |
| 599 | 592.09 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 605 | 592.51 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 607 | 592.58 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 723 | 595.46 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 13 |
| 737 | 595.79 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 18 |
| 740 | 595.82 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 18 |
| 781 | 596.10 | humidity | 60.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 804 | 596.56 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 826 | 597.06 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 901 | 598.96 | humidity | 60.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 927 | 599.62 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 934 | 599.71 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 977 | 600.78 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 988 | 600.98 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 4 | 1 |