BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0527000 Os07g0527000|Os07g0527000
(288 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0527000 Conserved hypothetical protein 535 e-152
Os07g0527300 216 2e-56
Os01g0546400 Protein of unknown function DUF6, transmembran... 201 4e-52
Os07g0524900 Protein of unknown function DUF6, transmembran... 187 6e-48
Os05g0106200 Protein of unknown function DUF6, transmembran... 145 3e-35
AK105841 145 3e-35
Os12g0518200 Protein of unknown function DUF6, transmembran... 136 2e-32
Os12g0133200 131 6e-31
Os01g0207900 Protein of unknown function DUF6, transmembran... 125 3e-29
Os01g0207700 Protein of unknown function DUF6, transmembran... 121 5e-28
Os01g0546100 Protein of unknown function DUF6, transmembran... 113 1e-25
Os11g0136300 Protein of unknown function DUF6, transmembran... 91 7e-19
Os02g0114050 Protein of unknown function DUF6, transmembran... 88 9e-18
Os12g0288000 Protein of unknown function DUF6, transmembran... 80 3e-15
Os01g0296900 Protein of unknown function DUF6, transmembran... 77 2e-14
>Os07g0527000 Conserved hypothetical protein
Length = 288
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/288 (91%), Positives = 264/288 (91%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXER 60
MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGS ER
Sbjct: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSAALVLIPAVLILER 60
Query: 61 PKAKQVTLKIAAKMFVHALYGIESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSF 120
PKAKQVTLKIAAKMFVHALYGIESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSF
Sbjct: 61 PKAKQVTLKIAAKMFVHALYGIESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSF 120
Query: 121 NHHHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIEETSKLMNTA 180
NHHHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIEETSKLMNTA
Sbjct: 121 NHHHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIEETSKLMNTA 180
Query: 181 LQISWXXXXXXXXXXXXERDFNKWKLGWDVELATGVVVTALSYYMQMWTITKGGRIFAGT 240
LQISW ERDFNKWKLGWDVELATGVVVTALSYYMQMWTITKGGRIFAGT
Sbjct: 181 LQISWAAVQAFVVAVAVERDFNKWKLGWDVELATGVVVTALSYYMQMWTITKGGRIFAGT 240
Query: 241 LLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQMPGDAGTKV 288
LLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQMPGDAGTKV
Sbjct: 241 LLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQMPGDAGTKV 288
>Os07g0527300
Length = 277
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/321 (43%), Positives = 164/321 (51%), Gaps = 78/321 (24%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXER 60
MGNG IKAYAA+VLIR+MYS M V+SKVALDQGMSP VF+FYRH + ER
Sbjct: 1 MGNGSIKAYAAVVLIRIMYSVMQVVSKVALDQGMSPLVFIFYRHTAAALVLIPIAFVLER 60
Query: 61 PKAKQVTLKIAAKMFVHALYGIESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSF 120
KAK+VTLK A KM VTG G F
Sbjct: 61 GKAKRVTLKNAGKM----------------------------VTGC-----------GDF 81
Query: 121 NHHHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIEETSKLMNTA 180
+ L N + +A Q V+G++ T LW V GPLIE+TSKLMNT
Sbjct: 82 FNLGL----NYASATSSSALYNVQPVVGVYE-TEEIPWTCLWNVFQGPLIEDTSKLMNTT 136
Query: 181 LQISWXXXXXXXXXXXXERDFNKWKLGWDVELA----TGVVVTALSYYMQMWTITKGGRI 236
+QIS+ ERDF+KWKLGW+ LA GV+VTALSYYMQ+WTI K G +
Sbjct: 137 IQISFASVQAFVVAVAAERDFSKWKLGWNFGLAAIIYNGVIVTALSYYMQIWTIAKRGPV 196
Query: 237 F------------------------------AGTLLIGGLYNVLWGKNIEEQDEVNDIVA 266
F AG LLIGGL+NVLWGKN+EE DE+N I
Sbjct: 197 FLAMSMPLTLIFTIIISSFILGEAVSLGSIVAGILLIGGLFNVLWGKNLEEHDELNKIGP 256
Query: 267 DKPEFEMQGKEAQMPGDAGTK 287
P+ EMQ KEAQ+P D T
Sbjct: 257 AIPDLEMQDKEAQVPNDRATN 277
>Os01g0546400 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 344
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 162/328 (49%), Gaps = 76/328 (23%)
Query: 4 GGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKA 63
G A+ LIR +Y GM +++K A ++GMS VFVFYRH ER A
Sbjct: 2 GTRAAFVVAFLIRSLYGGMQIVTKFAFNEGMSTSVFVFYRHVIAILFLVPVAFVLERKTA 61
Query: 64 KQVTLKIAAKMFVHALYGI---------------------------------------ES 84
+T K++ K+F+HALYGI ES
Sbjct: 62 PPLTFKVSLKLFLHALYGISGAINIYSLGLSYASATSSSAIFNLLPAVAFILALLMKMES 121
Query: 85 MKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQ 144
+ LK+++G K +G++ C+ GV +LAFYQGP L SFNHHHLF+ S+ +H T
Sbjct: 122 LNLKRINGIAKVSGVVLCIVGVIILAFYQGPELKSFNHHHLFR--TSTVYAAATSHPATT 179
Query: 145 WVLGIFLITLSNVLAGLWTVLLGPLIE-ETSKLMNTALQISWXXXXXXXXXXXXERDFNK 203
W+LGIFL TLS LWTVL GP++E SKL+NT +QI + ERDF++
Sbjct: 180 WILGIFLTTLSTTCWALWTVLQGPMLEVYPSKLLNTTIQIVFATIQCFFIALAIERDFSR 239
Query: 204 WKLGWDVELA----TGVVVTALSYYMQMWTITKGGRIF---------------------- 237
WKL D+ L +GV+V+ ++YYMQ+W I K G +F
Sbjct: 240 WKLHLDMGLIAVIYSGVLVSGVAYYMQVWVIDKSGPVFLAMTMPITLLVTIMLSSFVLGE 299
Query: 238 --------AGTLLIGGLYNVLWGKNIEE 257
+G +++GGLY VLW K E+
Sbjct: 300 AVTLGSIISGVVMVGGLYCVLWAKKSEQ 327
>Os07g0524900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 363
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 162/334 (48%), Gaps = 80/334 (23%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXE- 59
MGNG K YA +VLIRL+Y+GMH+++K + ++G S VFVFYRH E
Sbjct: 1 MGNG--KVYATVVLIRLIYAGMHILTKASFNEGASTTVFVFYRHAVAAIFLLPFAYFLEI 58
Query: 60 -RPKAKQVTLKIAAKMFVHALYGI------------------------------------ 82
+ +A +T +++AK+FVH YG+
Sbjct: 59 RKKQAPPLTFRLSAKIFVHGFYGMAGTINLYSIGLNYASATSSSAIFNIVPVVAFILAVM 118
Query: 83 ---ESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNA 139
E++ LK HG KA+GIL C+ GV VLA YQGP S NHH L A+++ A
Sbjct: 119 FRMETLNLKSTHGMAKASGILLCIGGVIVLALYQGPEFKSLNHHQLLHHASAAAA--AAA 176
Query: 140 HSKTQWVLGIFLITLSNVLAGLWTVLLGP-LIEETSKLMNTALQISWXXXXXXXXXXXXE 198
HSK W LGIFL+T S V+ WTV GP L+E SKLMNT LQ + E
Sbjct: 177 HSKKNWALGIFLMTTSVVIWSFWTVKQGPLLLEYPSKLMNTTLQCVFASVQSLVIALVLE 236
Query: 199 RDFNKWKLGWDVELA----TGVVVTALSYYMQMWTITKGGRIF----------------- 237
RDF++W L V L TG+VV A+SYY+Q+W I K G +F
Sbjct: 237 RDFSRWILPGVVSLVGVLFTGIVVAAISYYLQIWVIEKKGPVFLSMSMPLSLVFTMAIAS 296
Query: 238 -------------AGTLLIGGLYNVLWGKNIEEQ 258
LL+ GLYNVLWGK+ EE
Sbjct: 297 FLLGEDVSLGSIIGSLLLVAGLYNVLWGKSREEH 330
>Os05g0106200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 384
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 151/350 (43%), Gaps = 76/350 (21%)
Query: 5 GIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAK 64
G K Y ++I+++Y+G++V+SK A DQGM+ FVF+FYR + ER A
Sbjct: 3 GKKPYVIAIIIQVIYTGLYVVSKAAFDQGMNTFVFIFYRQAAATLLLLPLAIILERRNAP 62
Query: 65 QVTLKIAAKMFVHALYG---------------------------------------IESM 85
++L++ K+F++AL G +E +
Sbjct: 63 AMSLRLFTKLFMYALLGNTITMNMYNVSLKYTSATVASATSNSVPVVTFFLAVLLRLEVI 122
Query: 86 KLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQW 145
+L+ L G KAAG+ C+ GV V+A Y GP + NHH + ++ +W
Sbjct: 123 RLRTLSGVAKAAGVALCLAGVLVIALYAGPAISPLNHHRALSGGVHGAESSVGTGTRARW 182
Query: 146 VLGIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXER-DFNK 203
+ G FL+ LSN LW VL L++E +KL+ T +Q + R D
Sbjct: 183 MKGTFLMLLSNTTWSLWIVLQASLLKEYPNKLLATLIQCALSTLQSLLLAAAVVRADPAA 242
Query: 204 WKLGWDVELA----TGVVVTALSYYMQMWTITKGGRIF---------------------- 237
W+L D L TG VVT +S+Y+Q W I K G +F
Sbjct: 243 WRLRLDAGLLAVAYTGFVVTGVSFYLQAWCIEKKGPVFLAMSNPLCFVFTIFCSSFFLAE 302
Query: 238 --------AGTLLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQ 279
G LL+ GLY+VLWGK+ E + +A E Q K+ Q
Sbjct: 303 IVHLGSIVGGVLLVAGLYSVLWGKSKEHNINMQLTLAAAASTE-QVKQRQ 351
>AK105841
Length = 384
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 151/350 (43%), Gaps = 76/350 (21%)
Query: 5 GIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAK 64
G K Y ++I+++Y+G++V+SK A DQGM+ FVF+FYR + ER A
Sbjct: 3 GKKPYVIAIIIQVIYTGLYVVSKAAFDQGMNTFVFIFYRQAAATLLLLPLAIILERRNAP 62
Query: 65 QVTLKIAAKMFVHALYG---------------------------------------IESM 85
++L++ K+F++AL G +E +
Sbjct: 63 AMSLRLFTKLFMYALLGNTITMNMYNVSLKYTSATVASATSNSVPVVTFFLAVLLRLEVI 122
Query: 86 KLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQW 145
+L+ L G KAAG+ C+ GV V+A Y GP + NHH + ++ +W
Sbjct: 123 RLRTLSGVAKAAGVALCLAGVLVIALYAGPAISPLNHHRALSGGVHGAESSVGTGTRARW 182
Query: 146 VLGIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXER-DFNK 203
+ G FL+ LSN LW VL L++E +KL+ T +Q + R D
Sbjct: 183 MKGTFLMLLSNTTWSLWIVLQASLLKEYPNKLLATLIQCALSTLQSLLLAAAVVRADPAA 242
Query: 204 WKLGWDVELA----TGVVVTALSYYMQMWTITKGGRIF---------------------- 237
W+L D L TG VVT +S+Y+Q W I K G +F
Sbjct: 243 WRLRLDAGLLAVAYTGFVVTGVSFYLQAWCIEKKGPVFLAMSNPLCFVFTIFCSSFFLAE 302
Query: 238 --------AGTLLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQ 279
G LL+ GLY+VLWGK+ E + +A E Q K+ Q
Sbjct: 303 IVHLGSIVGGVLLVAGLYSVLWGKSKEHNINMQLTLAAAASTE-QVKQRQ 351
>Os12g0518200 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 373
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 155/376 (41%), Gaps = 94/376 (25%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXER 60
M +K Y ++++L+Y+GM V+SK A + GM+ ++F+FYR + +R
Sbjct: 1 MVKASMKPYFVAIIVQLIYTGMFVISKAAFNHGMNTYIFIFYRQ-AVGSLILLPAALLQR 59
Query: 61 PKAKQV-TLKIAAKMFVHALYGI------------------------------------- 82
A+QV TL + K+F AL GI
Sbjct: 60 KSARQVMTLGVLIKLFFCALIGITLGVNLYHVSLKFTSATVASAVDSSLPAITFFLAVLL 119
Query: 83 --ESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAH 140
E +KL+ G K + C+ GV +AF+ GP + NHH F +SD N
Sbjct: 120 RTEYVKLRSSSGIAKVTSVALCLAGVFTIAFFTGPSISPINHHRAF----ASDAGSKNVV 175
Query: 141 SKTQWVLGIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXER 199
+ W+ FL+ ++N+ LW + + +E K++ T Q + ER
Sbjct: 176 PRGVWIKWTFLMVIANMCWSLWIIFQAAVQKEYPDKMIVTLTQCLFSTVQSFVVAVVAER 235
Query: 200 DFNKWKLGWDVELA----TGVVVTALSYYMQMWT-------------------------- 229
DF+KWKL +D+ L +GV+VT +SYY+Q W
Sbjct: 236 DFSKWKLRFDISLLAILYSGVMVTGVSYYLQTWCLEMRGPMFFASWTPLCFVFTIFCSSF 295
Query: 230 ----ITKGGRIFAGTLLIGGLYNVLWGKNIEEQDEVNDIVADKPEFEM------------ 273
I G I G LL+G LY +LWGK+ +E +E +D+ D E
Sbjct: 296 FLGEIVHLGSILGGILLVGSLYTMLWGKS-KEGNETDDVTDDDIEKSTHIYPREQQHTTT 354
Query: 274 -QGKEAQMPGDAGTKV 288
Q KE+ + G A V
Sbjct: 355 DQDKESTLTGSAALHV 370
>Os12g0133200
Length = 294
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 130/286 (45%), Gaps = 42/286 (14%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXER 60
M +K Y ++++L+Y+GM V+SK A + GM+ ++FVFYR R
Sbjct: 1 MVKASMKPYFVAIVVQLIYTGMFVISKAAFNHGMNIYIFVFYRQAVGSLILLPAALLQRR 60
Query: 61 PKAKQVTLKIAAKMFVHALYGI-----------ESMKLKKLHGNVKAAGILFCVTGVTVL 109
+TL + K+F AL GI E +KL+ G K + C+ GV +
Sbjct: 61 SARPAMTLGVLIKLFFCALIGITLGVNLYHDRTEYVKLRSSSGIAKVTSVALCLAGVFTI 120
Query: 110 AFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPL 169
F+ GP + NHH F +SD + W+ WT L+ +
Sbjct: 121 VFFTGPSISPINHHRAF----ASDTSSKTVVPRGVWI--------------KWTFLMAAV 162
Query: 170 IEE-TSKLMNTALQISWXXXXXXXXXXXXERDFNKWKLGWDVELA----TGVVVTALSYY 224
+E K++ T + + ERDF++WKL +D+ L +GV+VT +SYY
Sbjct: 163 QKEYPDKMVVTVTRCLFSTMQSFVVAVVAERDFSRWKLRFDISLLAILYSGVMVTGVSYY 222
Query: 225 MQMWTITKGGRIFAGTLLIGGLYNVLWGKNIEEQDEVNDIVADKPE 270
+Q I G LL+ LY +LWGK+ +E +E +D+ D E
Sbjct: 223 LQTC-------ILGGILLVASLYTMLWGKS-KEGNETDDVTDDDIE 260
>Os01g0207900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 384
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 146/358 (40%), Gaps = 85/358 (23%)
Query: 7 KAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAKQV 66
K Y +++I+L+ +G+ V+SK A + GM+ FVF+FYR + ER A +
Sbjct: 5 KPYVIVIVIQLINTGLFVISKAAFNHGMNTFVFIFYRQAAASLLLLPLAIVLERRNAPPM 64
Query: 67 TLKIAAKMFVHALYG--------------------------------------------- 81
+L++ K+F++AL G
Sbjct: 65 SLRLFTKLFLYALLGNTLSLNMYNLGLKYTSPTVASATTNSIPVVTFFFALLLRRAQSII 124
Query: 82 ---IESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGN 138
+E ++LK L G K AG++ CV GV +A Y GP + NHH F +
Sbjct: 125 HLWVEVIRLKSLSGAAKMAGVVLCVGGVLAIALYAGPAISPVNHHRAFGGGGGGGHESAS 184
Query: 139 AHSKTQWVLGIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQI-SWXXXXXXXXXXX 196
A ++T+WV G L+ LSN LWTVL+ L+ E SKL+ TA Q
Sbjct: 185 ATTRTRWVKGTLLMLLSNATWSLWTVLMASLLREYPSKLLATAAQCALSAAQSLALAAAA 244
Query: 197 XERDFNKWKLGWDVELA----TGVVVTALSYYMQMWTITKGG--------------RIFA 238
RD W+L D L + V VT S YMQ W I K G IF
Sbjct: 245 AGRDPAAWRLRPDAGLLAVAYSAVAVTGASLYMQAWCIEKKGPVFLAMSNPLSFVFTIFC 304
Query: 239 GTLLIGGL----------------YNVLWGKNIEEQDEVNDIVADKPEFEMQGKEAQM 280
++G + Y+VLWGK+ +E D + A +Q +E ++
Sbjct: 305 ALFVLGEVVHLGSVVGGVLMVVGLYSVLWGKS-KEHDTLTLATAMPTPASVQQQEKKV 361
>Os01g0207700 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 372
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 139/331 (41%), Gaps = 78/331 (23%)
Query: 7 KAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAKQV 66
K Y ++I+++Y+G+ V++K A + G + F+F+FYR + ER A +
Sbjct: 5 KPYFIAIIIQVIYTGLFVVTKAAFNHGTNTFIFIFYRQAAASLLLLPLAIILERKNAPPM 64
Query: 67 TLKIAAKMFVHALYG---------------------------------------IESMKL 87
++++ AK+F++AL G +E ++L
Sbjct: 65 SIRLFAKLFLYALLGNTISFNLYNTGLKYTSSTVASAAASSVPVLTFFFAVLLRLEVIRL 124
Query: 88 KKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQWVL 147
++L G K AG+ C+ GV V+A Y GP L NHH F S A ++ +WV
Sbjct: 125 RRLSGVAKVAGVGLCLGGVLVIALYSGPALSPLNHHRAFGGGAESG--SSGAATRARWVT 182
Query: 148 GIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQ-----ISWXXXXXXXXXXXXERDF 201
G L+ LSNV LW VL+ PL+ E K++ TALQ
Sbjct: 183 GTLLMLLSNVTWSLWIVLMSPLLNEYPCKMLATALQSLLSAAQSLVLAAAAAARNPAARR 242
Query: 202 NKWKLGWDVELATGVVVTALSYYMQMWTITKGGRIF------------------------ 237
+ G + V VT +SYY+Q W I K G +F
Sbjct: 243 LRLDAGLLAVAYSAVAVTGVSYYLQAWCIQKKGPVFLAMSSPLSFVFTIFCSSFFLGEVV 302
Query: 238 ------AGTLLIGGLYNVLWGKNIEEQDEVN 262
G L++ GLY+VLWGK+ +E D +
Sbjct: 303 HLGSVVGGVLMVAGLYSVLWGKS-KEHDTLT 332
>Os01g0546100 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 212
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 97/205 (47%), Gaps = 45/205 (21%)
Query: 1 MGNGGIKAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXER 60
MGN + A IR +Y G+ +++K+A ++GMS VFVFYRH ER
Sbjct: 1 MGNREVLVVA--FFIRSIYGGVQIVTKIAFNRGMSTTVFVFYRHAIAILFLVPVAFVVER 58
Query: 61 PKAKQVTLKIAAKMFVHALYGI-------------------------------------- 82
A ++ KI K+FVHALYGI
Sbjct: 59 KTAPPLSYKILLKLFVHALYGIAGSVNIYGLGLSYSSATSSSAISNLLPVLAFFLAVLMG 118
Query: 83 -ESMKLKKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGN-AH 140
ES+ LK++HG K G+LF + GV +LAFYQGP L S N HL ++ + P G+ A+
Sbjct: 119 MESLNLKRIHGIAKVFGVLFSIVGVIILAFYQGPELKSLNLQHL---SSRNVVPTGSTAY 175
Query: 141 SKTQWVLGIFLITLSNVLAGLWTVL 165
+ W GIFL LS LWTVL
Sbjct: 176 TTKAWTSGIFLTVLSTTSWALWTVL 200
>Os11g0136300 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 315
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 39/205 (19%)
Query: 88 KKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPEGNAHSKTQWVL 147
++L + K + C+ GV +AF+ GP + NHH F +SD + W+
Sbjct: 72 EELFRHTKVTSVAICLAGVFTIAFFTGPSISPINHHRAF----ASDTSSKTVVPRGVWIK 127
Query: 148 GIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXERDFNKWKL 206
FL+ ++N+ LW + + +E K++ T Q + ERDF++WKL
Sbjct: 128 WTFLMVVANMCWSLWIIFQAAVQKEYPDKMVVTVTQCLFSTVQSFVVAVVAERDFSRWKL 187
Query: 207 GWDVELA----TGVVVTALSYYMQMWT------------------------------ITK 232
+D+ L +GV+VT +SYY+Q W I
Sbjct: 188 RFDISLLAILYSGVMVTGVSYYLQTWCLEMRGPMFFASWTPLCFVFTIFCSSFFLGEIVH 247
Query: 233 GGRIFAGTLLIGGLYNVLWGKNIEE 257
G I G LL+G LY +LWGK+ E+
Sbjct: 248 LGSILGGILLVGSLYTMLWGKSKED 272
>Os02g0114050 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 386
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 127/330 (38%), Gaps = 87/330 (26%)
Query: 7 KAYAAIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAKQV 66
+ + A++ ++L Y+G HV+S++ALD G+S VF YR+ E+ + +
Sbjct: 19 RLHVAMLALQLGYAGFHVVSRLALDMGVSKLVFPVYRNLIALFLLAPFAYFLEKKERPAM 78
Query: 67 TLKIAAKMFVHALYGI---------------------------------------ESMKL 87
T +A + F AL GI E ++L
Sbjct: 79 TASLAVQFFFLALCGITANQGFYLLGLENTSPTFASAIQNSVPAITFAMAAALRIERVRL 138
Query: 88 KKLHGNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHLFQQANSSDDPE----GNAHSKT 143
G K AG L CV G +V+ ++GP + FN HH N P+ A
Sbjct: 139 SSRDGLAKVAGTLLCVAGASVITLFKGPAI--FNTHH-----NHQPQPQQLAVAVAAGNK 191
Query: 144 QWVLG-IFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXERDF 201
W LG +FL+ +G W VL P+++ ++L T+ + ERD
Sbjct: 192 SWTLGCVFLLGHCVSWSG-WLVLQAPVLKRYPARLSVTSYTCFFGLIQFLAIAAFLERDA 250
Query: 202 NKWKLGWDVELAT----GVVVTALSYYMQMWTITKGGRIFA------------------- 238
W + EL T G V + +++ +Q W I +GG +F
Sbjct: 251 AAWAVRSGSELFTILYAGFVASGVAFAVQTWCIHRGGPVFVAVYQPVQTLLVAVMASLLL 310
Query: 239 -----------GTLLIGGLYNVLWGKNIEE 257
L++ GLY VLWGK+ E
Sbjct: 311 GEQFHLGGIIGAVLIVAGLYLVLWGKSQER 340
>Os12g0288000 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 373
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 129/330 (39%), Gaps = 82/330 (24%)
Query: 11 AIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAKQVTLKI 70
++VL++L G +++K++ + GM+PFV + YR+ ER K+V K+
Sbjct: 18 SMVLVQLFTIGALLLAKLSFNSGMAPFVLLAYRNLIGTVTMLPFAFWFERQMMKKVNYKV 77
Query: 71 AAKMFVHALYGI---------------------------------------ESMKLKKLH 91
+F +AL+GI E +KLK
Sbjct: 78 LGWIFFNALFGIVLAMGLHYYGLRATNAGYTVNFLNLVPVVTFIIAAIFRLEKLKLKTRS 137
Query: 92 GNVKAAGILFCVTGVTVLAFYQGPMLGSFNHHHL----FQQANSSDDPEGNAHSKTQWVL 147
G +K G + CV G V++ Y+G +L + H L + SDD H ++
Sbjct: 138 GMIKVIGTVICVVGTMVVSLYRGKLLHLWPTHLLKPAQLRAIGGSDDSTFPTHHNM--LI 195
Query: 148 GIFLITLSNVLAGLWTVLLGPLIEE-TSKLMNTALQISWXXXXXXXXXXXXERDFNKWKL 206
G + S + W ++ + +E SK +T L +RD + W L
Sbjct: 196 GTLFLCGSCLSYAFWFIVQAKVNKEFPSKYFSTMLACLMGTIQAVVIGIAVDRDRSAWAL 255
Query: 207 GWDVELAT----GVVVTALSYYMQMWTITK-------------------------GGRIF 237
WD++L T GV TA ++ + W +++ G I
Sbjct: 256 HWDLQLITIIYSGVFNTAATFCLITWAVSRRGPTYPSMFNSLALIITVVLDSMLLGSDIS 315
Query: 238 AGTLL-----IGGLYNVLW--GKNIEEQDE 260
G+LL I GLY+ LW GK I+EQ +
Sbjct: 316 VGSLLGAFMIIIGLYSFLWGKGKEIKEQQQ 345
>Os01g0296900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 358
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 60/321 (18%)
Query: 11 AIVLIRLMYSGMHVMSKVALDQGMSPFVFVFYRHGSXXXXXXXXXXXXERPKAKQVTLKI 70
A+VL++L +G++VMSK+ + GMSP+V + YR+ ER QV +
Sbjct: 14 AMVLVQLGLAGLNVMSKLTMASGMSPYVLLAYRNFIAAAFLAPIAFLVERATLNQVLYFV 73
Query: 71 ------------------AAKMFVHALYGIESMKLKKLHGNVKAAGILFCVTGVTVLAFY 112
A + AL +E + + G K AG CV G ++ FY
Sbjct: 74 GLKYSSPTVASALNNTLPAVTFLLAALLKMEPVAGRA--GRAKVAGTALCVAGSMLMTFY 131
Query: 113 QGPMLGSFNH--HHLFQQANSSDDPEGNAHSKTQWVLGIFLITLSNVLAGLWTVLLGPLI 170
+GP++ + H + Q + + VLG L+ SNV +W ++ L
Sbjct: 132 RGPLVRTLASPVHWPYVQGTMAAE-AAAHAGGHAVVLGAVLVIGSNVAWAIWFIIQKNLS 190
Query: 171 EE-TSKLMNTALQISWXXXXXXXXXXXXERDFNKWKLGWDVEL---------ATGVVVTA 220
+ +TAL ER F+ W+LG D+ L A+G+V T
Sbjct: 191 KSFACPYTSTALMALIASVQCAAIAGAAERRFSAWELGLDIRLVGALYAGIVASGMVCTV 250
Query: 221 LSYYMQM---------------------WTI----TKGGRIFAGTLLIGGLYNVLWGKNI 255
+S+ +Q W I G + +++ GLY VLWGK
Sbjct: 251 MSWCIQERGPVFVSMFSPLMLIVVAVVGWGILGEKIHVGSVIGAVIIVVGLYTVLWGKG- 309
Query: 256 EEQDEVNDIVADKP-EFEMQG 275
+ D +A P + EM G
Sbjct: 310 RDLDGAAVAIASLPGDEEMNG 330
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,667,068
Number of extensions: 305731
Number of successful extensions: 707
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 698
Number of HSP's successfully gapped: 20
Length of query: 288
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 188
Effective length of database: 11,814,401
Effective search space: 2221107388
Effective search space used: 2221107388
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)