BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0263900 Os01g0263900|AK063318
(496 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0263900 Zinc finger, Dof-type family protein 802 0.0
Os07g0685000 Similar to Dof3 gene (Fragment) 262 5e-70
Os01g0277500 Similar to Dof3 gene (Fragment) 226 4e-59
Os03g0169600 Zinc finger, Dof-type family protein 160 2e-39
Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-bi... 128 1e-29
Os01g0758200 Similar to Dof2 (Fragment) 118 1e-26
Os08g0490100 Similar to PBF protein 104 1e-22
Os07g0508900 Zinc finger, Dof-type family protein 102 6e-22
Os03g0276300 102 8e-22
Os03g0764900 Similar to Zn finger protein (Fragment) 102 1e-21
Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-bi... 100 2e-21
Os07g0236700 Similar to Dof2 (Fragment) 100 2e-21
Os02g0252400 Similar to Zn finger protein (Fragment) 100 2e-21
Os02g0707200 Similar to Zn finger protein (Fragment) 99 5e-21
Os09g0475800 Similar to Zn finger protein (Fragment) 99 6e-21
Os03g0821200 Similar to Zn finger protein (Fragment) 98 1e-20
Os03g0585600 98 2e-20
Os05g0112200 Similar to Zn finger protein (Fragment) 96 5e-20
AB028133 96 5e-20
Os02g0673700 Zinc finger, Dof-type family protein 96 6e-20
Os01g0193300 96 8e-20
Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-bi... 95 9e-20
Os06g0284500 Zinc finger, Dof-type family protein 95 1e-19
Os12g0590700 94 2e-19
Os05g0440000 Zinc finger, Dof-type family protein 94 2e-19
Os12g0569900 Similar to Zn finger protein (Fragment) 94 3e-19
Os03g0619100 Zinc finger, Dof-type family protein 92 9e-19
Os01g0673700 87 2e-17
Os04g0678400 Zinc finger, Dof-type family protein 84 3e-16
Os10g0496000 Zinc finger, Dof-type family protein 81 2e-15
>Os01g0263900 Zinc finger, Dof-type family protein
Length = 496
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/496 (81%), Positives = 403/496 (81%)
Query: 1 MKVDVPQEEEDNEMKVDAPQEKKDNEVTADVPEEKGNDEMRVDASESIESIEPVSRSTLD 60
MKVDVPQEEEDNEMKVDAPQEKKDNEVTADVPEEKGNDEMRVDASESIESIEPVSRSTLD
Sbjct: 1 MKVDVPQEEEDNEMKVDAPQEKKDNEVTADVPEEKGNDEMRVDASESIESIEPVSRSTLD 60
Query: 61 NKKEDQGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYY 120
NKKEDQGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYY
Sbjct: 61 NKKEDQGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYY 120
Query: 121 NNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVE 180
NNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVE
Sbjct: 121 NNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVE 180
Query: 181 ISKSMNPEAFASAHSTPIQPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPTG 240
ISKSMNPEAFASAHSTPIQPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPTG
Sbjct: 181 ISKSMNPEAFASAHSTPIQPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPTG 240
Query: 241 ENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYYLGAPYMYPWNIGWNNV 300
ENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYYLGAPYMYPWNIGWNNV
Sbjct: 241 ENQEDNSCISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYYLGAPYMYPWNIGWNNV 300
Query: 301 PMMVPGXXXXXXXXXXXXXXXXXXXWMNMNSPMMPVASRLSAXXXXXXXXXXALWGCLSS 360
PMMVPG WMNMNSPMMPVASRLSA ALWGCLSS
Sbjct: 301 PMMVPGTSMPESASQSESCSTSSAPWMNMNSPMMPVASRLSAPPFPYPLVPPALWGCLSS 360
Query: 361 WPATAWNIPWIRTNXXXXXXXXXXXXXXXXXXXXLGKHSRDSSLPLKEDKEEKSLWVPKT 420
WPATAWNIPWIRTN LGKHSRDSSLPLKEDKEEKSLWVPKT
Sbjct: 361 WPATAWNIPWIRTNGGCMSPSSSSNSSCSGNGSPLGKHSRDSSLPLKEDKEEKSLWVPKT 420
Query: 421 LRIDDPDEXXXXXXXXXXXXXXPKVRAKAKXXXXXXXXXXXXXXXXXCXXXXXXXXXXXX 480
LRIDDPDE PKVRAKAK C
Sbjct: 421 LRIDDPDEAAKSSILASSSRSSPKVRAKAKQHQRLVLLVLLRQTQLHCRGRSRSRRLLDS 480
Query: 481 XPVEFPIVFVSTVCVL 496
PVEFPIVFVSTVCVL
Sbjct: 481 LPVEFPIVFVSTVCVL 496
>Os07g0685000 Similar to Dof3 gene (Fragment)
Length = 476
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 223/418 (53%), Gaps = 37/418 (8%)
Query: 21 EKKDNEVTAD--VPEEKGNDEMRVDASESIESIEPVSRSTLDNKKEDQGQMNNVEEKAAS 78
EK E T D + EEK + +DA + ++ S+ ++ E + Q + +E S
Sbjct: 29 EKDSCEDTGDMRISEEKPCTDQELDADQ-------MNSSSFNSSSECENQTPSNDEMTGS 81
Query: 79 DSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRY 138
+SK E +T S ++KVLKKPDKILPCPRCNSMDTKFCYYNNYN+NQPRHFCK+CQRY
Sbjct: 82 ESKSEAAQTEGGGSSEEKVLKKPDKILPCPRCNSMDTKFCYYNNYNINQPRHFCKSCQRY 141
Query: 139 WTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVEISKSMNPEAFASAHSTPI 198
WTAGG+MRN+PVGAGRRKSKSS+ +YR +L + GS + P A + I
Sbjct: 142 WTAGGSMRNLPVGAGRRKSKSSTANYRSIL-----ITGSNLAA-----PAGDAPLYQLSI 191
Query: 199 QPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPTGE--NQEDNSCISSITSHN 256
+ + T +KF P+ PLC SMASVL I EQ+ NA T + N E +C +S T+ +
Sbjct: 192 K-GDQTATAVKFAPDSPLCNSMASVLKIGEQS-KNAKPTSTAQPRNGETQTCPASGTTSD 249
Query: 257 VL---PENAAQVDKNSTPVYCNGVGPVPQY--YLGAPYMYPWNIGWNNVPMMVPGXXXXX 311
P N A + V +GV P+ + G P++YPW+ WN +P M P
Sbjct: 250 SPRNEPVNGAVSGHQNGIVGHSGVPPMHPIPCFPGPPFVYPWSPAWNGIPAMAPPVCTAP 309
Query: 312 XXXXXXXXXXXXXXWMNMNSPMMPVASRLSAXXXXXXXXXXALWGCLSSWPATAWNIPWI 371
P+MPV ++W +S WP AW+ PWI
Sbjct: 310 AEPANSSDNGSTASVQWSMPPVMPVPGYFPV-------IPSSVWPFISPWPNGAWSSPWI 362
Query: 372 RTN-XXXXXXXXXXXXXXXXXXXXLGKHSRDSSLPLKEDKEEKSLWVPKTLRIDDPDE 428
+ N LGKHSRDS P +DK EK+LW+PKTLRIDDPDE
Sbjct: 363 QPNCSVSASSPTSTSTCSDNGSPVLGKHSRDSK-PQGDDKAEKNLWIPKTLRIDDPDE 419
>Os01g0277500 Similar to Dof3 gene (Fragment)
Length = 490
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 196/375 (52%), Gaps = 16/375 (4%)
Query: 60 DNKKEDQGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCY 119
++KK D ++ + + DS E+ KT D S +K+LKKPDKILPCPRCNSM+TKFCY
Sbjct: 69 NSKKNDLQGISRPDGRIEIDSMTEDVKTEPDGSVPEKILKKPDKILPCPRCNSMETKFCY 128
Query: 120 YNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRV 179
+NNYNV+QPRHFC+NCQRYWTAGG MRNVPVGAGRR++K S + + ++ + +
Sbjct: 129 FNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRRRNKHVSKYCQAMMTCNNTVAPG-- 186
Query: 180 EISKSMNPEAFASAHSTPIQPIGRNETVLKFGPEVPLCESMASVLNIQEQNGTNAAAVPT 239
++S ++ + S + NET +F EVP C+S AS+L+I E N T+ + +
Sbjct: 187 DVSDVVHHQVITHGSSLLPATLKENETPTEFISEVPPCKSSASILDIGEPNDTDLVPLAS 246
Query: 240 GENQEDN----SCISSITSHNVLPENAAQVDKNSTPVYCNGVG-PVPQYYLGAPYMYPWN 294
G+N+E+ S + S S N++P+NA + N+ CNGV P P G + PW+
Sbjct: 247 GDNKEEKSCASSVVVSSCSENLMPDNAIMKEPNNRSGCCNGVALPFPT---GPALVLPWS 303
Query: 295 IGWNNVPMMVPGXXXXXXXXXXXXXXXXXXXWMNMNSPMMPVASRLSAXXXXXXXXXXAL 354
+GWN+V +M W P + V + L
Sbjct: 304 LGWNSVALMPATQCSMQPVLGLKDGIPCPPSW----PPQLMVPAPGICTPVVPIPLVPPL 359
Query: 355 WGCLSSWPATAWNIPWIRTNXXXXXXXXXXXXX-XXXXXXXLGKHSRDSSLPLKEDKEEK 413
W C WP WN N LGKHSR+ SL +E+K
Sbjct: 360 WSCFPGWPNGMWNAQCPGGNTTVLPSTAPNKISCSGSSSLVLGKHSREESL-QEEEKTRN 418
Query: 414 SLWVPKTLRIDDPDE 428
LWVPKTLRIDDP E
Sbjct: 419 YLWVPKTLRIDDPAE 433
>Os03g0169600 Zinc finger, Dof-type family protein
Length = 440
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 126/232 (54%), Gaps = 30/232 (12%)
Query: 66 QGQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNV 125
Q ++ + E+ +A + EN++ D + Q + LKKPDKILPCPRC+SMDTKFCYYNNYN+
Sbjct: 67 QPEVVDTEDSSADKNSSENQQQQGDTANQKEKLKKPDKILPCPRCSSMDTKFCYYNNYNI 126
Query: 126 NQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSSLHYRHLLMAPDCMMGSRVEISKSM 185
NQPRHFCKNCQRYWTAGG MRNVPVGAGRRKSKS S H L RV +
Sbjct: 127 NQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVSA-ASHFLQ--------RVRAALPG 177
Query: 186 NPEAFASAHSTPIQPIGRNETVLKFGPEVP---LCESMASVLN--IQEQNGTNAAAVPTG 240
+P +A P+ N TVL FG ++ L E M + + I N +P G
Sbjct: 178 DPPLYA--------PVKTNGTVLSFGSDLSTLDLTEQMKHLKDKFIPTTGIKNTDEMPVG 229
Query: 241 -------ENQEDNSC-ISSITSHNVLPENAAQVDKNSTPVYCNGVGPVPQYY 284
+ +E N + S + P A N ++ GV P P YY
Sbjct: 230 LCAEGLSKTEESNQTNLKEKVSADRSPNVAQHPCMNGGAMWPFGVAPPPAYY 281
>Os10g0406300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 194
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 53/70 (75%), Positives = 61/70 (87%)
Query: 84 NEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGG 143
E ++ + ++ LKKPDKILPCPRC+SMDTKFCY+NNYNVNQPRHFCK+CQRYWTAGG
Sbjct: 74 GEAASHQQQQKEMKLKKPDKILPCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGG 133
Query: 144 TMRNVPVGAG 153
MRNVPVGAG
Sbjct: 134 AMRNVPVGAG 143
>Os01g0758200 Similar to Dof2 (Fragment)
Length = 211
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 67/101 (66%), Gaps = 10/101 (9%)
Query: 67 GQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKI---------LPCPRCNSMDTKF 117
GQ +++ +AA D +E + D +GQ + D LPCPRC S DTKF
Sbjct: 63 GQRASIKREAA-DRDEEQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRSRDTKF 121
Query: 118 CYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
CY+NNYNVNQPRHFCK C RYWTAGG +RNVPVGAGRRK++
Sbjct: 122 CYFNNYNVNQPRHFCKACHRYWTAGGALRNVPVGAGRRKNR 162
>Os08g0490100 Similar to PBF protein
Length = 276
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 44/51 (86%)
Query: 106 PCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 156
PCPRC S DTKFCYYNNYN +QPRHFCK C+RYWT GGT+RNVPVG G RK
Sbjct: 62 PCPRCESRDTKFCYYNNYNTSQPRHFCKCCRRYWTKGGTLRNVPVGGGTRK 112
>Os07g0508900 Zinc finger, Dof-type family protein
Length = 359
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 49/56 (87%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSS 160
L CPRC+S +TKFCYYNNY+++QPRHFCK C+RYWT GGT+RNVPVG G RK+K S
Sbjct: 49 LRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRS 104
>Os03g0276300
Length = 403
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 51/59 (86%)
Query: 100 KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
+P+ L CPRC+S +TKFCYYNNY+++QPRHFCK C+RYWT GG++RNVPVG G R++K
Sbjct: 86 QPEPALKCPRCDSTNTKFCYYNNYSLSQPRHFCKTCRRYWTRGGSLRNVPVGGGCRRNK 144
>Os03g0764900 Similar to Zn finger protein (Fragment)
Length = 359
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
L CPRCNS +TKFCYYNNYN+ QPRHFCK C+RYWT GG +RNVP+G G RK +
Sbjct: 79 LRCPRCNSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKPR 132
>Os02g0726300 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 282
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSKSSS 161
CPRC S +TKFCYYNNYN++QPRHFCK+C+RYWT GG +RNVPVG G RK+K S
Sbjct: 47 CPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSG 101
>Os07g0236700 Similar to Dof2 (Fragment)
Length = 332
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 98 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKS 157
+ +P+ L CPRC+S +TKFCY+NNY++ QPRHFCK C+RYWT GG +RNVPVG G R++
Sbjct: 46 IPQPEPGLKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRNVPVGGGFRRN 105
Query: 158 K 158
K
Sbjct: 106 K 106
>Os02g0252400 Similar to Zn finger protein (Fragment)
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
Query: 67 GQMNNVEEK----AASDSKDENEKTANDESGQDKVLKKPDKILPCPRCNSMDTKFCYYNN 122
G ++ VEEK + ++ E+ A +++KK CPRCNS+ TKFCYYNN
Sbjct: 5 GALSPVEEKPTVVKTTKAEQHEEEAAVAVKSAAEMMKKSSPC--CPRCNSIKTKFCYYNN 62
Query: 123 YNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
Y++ QPR+FC+ C+RYWT GG++RNVPVG G RKSK
Sbjct: 63 YSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSK 98
>Os02g0707200 Similar to Zn finger protein (Fragment)
Length = 281
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 95 DKVLK-KPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 153
D+ L+ + D+ L CPRC S TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G
Sbjct: 26 DRRLRPQHDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGG 85
Query: 154 RRKSK 158
RK+K
Sbjct: 86 CRKNK 90
>Os09g0475800 Similar to Zn finger protein (Fragment)
Length = 230
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 39/50 (78%), Positives = 44/50 (88%)
Query: 106 PCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 155
PCPRC S DTKFCYYNNYN +QPRHFCK+C+RYWT GG++RNVPVG G R
Sbjct: 43 PCPRCESRDTKFCYYNNYNTSQPRHFCKSCRRYWTKGGSLRNVPVGGGSR 92
>Os03g0821200 Similar to Zn finger protein (Fragment)
Length = 414
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 50/61 (81%)
Query: 98 LKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKS 157
+ +P+ L CPRC S +TKFCY+NNY+++QPRHFCK C+RYWT GG +RNVPVG G R++
Sbjct: 111 IPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN 170
Query: 158 K 158
K
Sbjct: 171 K 171
>Os03g0585600
Length = 371
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
L CPRC+S +TKFCYYNNY+++QPRHFCK C+RYWT GG +RNVPVG G RK+K
Sbjct: 48 LRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNK 101
>Os05g0112200 Similar to Zn finger protein (Fragment)
Length = 290
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 47/56 (83%)
Query: 101 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 156
P+ L CPRC+S +TKFCY+NNY+++QPRHFC+ C+RYWT GG +RNVPVG G R+
Sbjct: 36 PEPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRR 91
>AB028133
Length = 235
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 67 GQMNNVEEKAASDSKDENEKTANDESGQDKVLKKPDKI---------LPCPRCNSMDTKF 117
GQ +++ +AA D +E + D +GQ + D LPCPRC S DTKF
Sbjct: 70 GQRASIKREAA-DRDEEQRQGGGDAAGQPTQRRLQDSAEARAAAAAPLPCPRCRSRDTKF 128
Query: 118 CYYNNYNVNQPRHFCKNCQRYWTAGG 143
CY+NNYNVNQPRHFCK C RYWTAGG
Sbjct: 129 CYFNNYNVNQPRHFCKACHRYWTAGG 154
>Os02g0673700 Zinc finger, Dof-type family protein
Length = 375
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 45/52 (86%)
Query: 102 DKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 153
+K L CPRCNS +TKFCYYNNY++ QPR+FCK C+RYWT GG++RNVPVG G
Sbjct: 71 EKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGG 122
>Os01g0193300
Length = 215
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 42/51 (82%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 155
L CPRC S +TKFCYYNNYN+ QPRHFCK C+RYWT GG +RNVPVG G R
Sbjct: 30 LACPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTR 80
>Os01g0865800 Similar to AOBP (Ascorbate oxidase promoter-binding protein)
Length = 320
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 95 DKVLKKPDKILP-CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 153
D+ K+ + P CPRC+S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G
Sbjct: 14 DRRYKQGAEAAPNCPRCDSPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGG 73
Query: 154 RRKSK 158
RK++
Sbjct: 74 CRKNR 78
>Os06g0284500 Zinc finger, Dof-type family protein
Length = 289
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 42/47 (89%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAG 153
CPRC+S +TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G
Sbjct: 32 CPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGG 78
>Os12g0590700
Length = 265
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 41/50 (82%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 156
CPRC S DTKFCYYNNYN QPRHFC+ C+RYWT GG++RNVP+G RK
Sbjct: 53 CPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRK 102
>Os05g0440000 Zinc finger, Dof-type family protein
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 46/52 (88%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
CPRC S +TKFCYYNNY+++QPR+FCK C+RYWT GG++RNVPVG G RK++
Sbjct: 40 CPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNR 91
>Os12g0569900 Similar to Zn finger protein (Fragment)
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRK 156
L CPRC+S +TKFCY+NNY+++QPRHFCK C+RYWT GG +RNVPVG G R+
Sbjct: 94 LRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>Os03g0619100 Zinc finger, Dof-type family protein
Length = 202
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGA 152
CPRC S DTKFCYYNNYN +QPRHFC+ C+RYWT GG++RNVP+G
Sbjct: 51 CPRCASHDTKFCYYNNYNTSQPRHFCRACRRYWTLGGSLRNVPIGG 96
>Os01g0673700
Length = 175
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 105 LPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNV 148
LPCPRC S +TKFCY+NNYNV QPRH C++C+RYWTAGG +R V
Sbjct: 84 LPCPRCGSRETKFCYFNNYNVRQPRHLCRSCRRYWTAGGALRRV 127
>Os04g0678400 Zinc finger, Dof-type family protein
Length = 207
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 107 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPV 150
CPRC S +TKFCYYNNY+ +QPRHFC+ C+RYWT GGT+R+VPV
Sbjct: 52 CPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPV 95
>Os10g0496000 Zinc finger, Dof-type family protein
Length = 247
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 110 CNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKSK 158
C S +TKFCYYNNY+ QPR+ CK C+R+WT GGT+R+VPVG GR+ SK
Sbjct: 83 CGSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNSK 131
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.128 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,787,718
Number of extensions: 598615
Number of successful extensions: 2462
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 2444
Number of HSP's successfully gapped: 30
Length of query: 496
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 391
Effective length of database: 11,553,331
Effective search space: 4517352421
Effective search space used: 4517352421
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)