BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0119200 Os11g0119200|AK103124
(491 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0119200 Zinc finger, RING-type domain containing protein 975 0.0
Os12g0118700 Zinc finger, RING-type domain containing protein 902 0.0
Os10g0487400 Zinc finger, RING-type domain containing protein 114 2e-25
Os05g0110000 Zinc finger, RING-type domain containing protein 102 6e-22
Os06g0101300 Zinc finger, RING-type domain containing protein 102 7e-22
Os03g0351800 Zinc finger, RING-type domain containing protein 101 1e-21
Os05g0488800 Zinc finger, RING-type domain containing protein 100 4e-21
Os02g0727700 Zinc finger, RING-type domain containing protein 98 1e-20
Os08g0487500 Zinc finger, RING-type domain containing protein 95 1e-19
Os05g0495000 94 3e-19
Os01g0802000 Zinc finger, RING-type domain containing protein 93 4e-19
Os01g0972000 Zinc finger, RING-type domain containing protein 91 2e-18
Os02g0767600 90 3e-18
Os03g0812200 Zinc finger, RING-type domain containing protein 90 3e-18
Os06g0633500 Zinc finger, RING-type domain containing protein 87 4e-17
Os03g0324900 Zinc finger, RING-type domain containing protein 84 3e-16
Os01g0276600 Zinc finger, RING-type domain containing protein 82 1e-15
Os03g0271600 Zinc finger, RING-type domain containing protein 80 4e-15
Os09g0434200 Zinc finger, RING-type domain containing protein 78 1e-14
Os08g0464400 Zinc finger, RING-type domain containing protein 73 4e-13
Os09g0242800 Zinc finger, RING-type domain containing protein 69 6e-12
Os02g0191500 Similar to Goliath homolog precursor (RING fin... 69 8e-12
>Os11g0119200 Zinc finger, RING-type domain containing protein
Length = 491
Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/491 (96%), Positives = 473/491 (96%)
Query: 1 MSDHQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATVLNDVERDEIXXXXXXX 60
MSDHQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATVLNDVERDEI
Sbjct: 1 MSDHQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATVLNDVERDEITSTSHHT 60
Query: 61 XXXXXXXXXXXIDSLEDAFSQEFSQLIDLARRQGRETDIDSSSVLPQHASYNATPSHSQR 120
IDSLEDAFSQEFSQLIDLARRQGRETDIDSSSVLPQHASYNATPSHSQR
Sbjct: 61 RRRRQRSRTASIDSLEDAFSQEFSQLIDLARRQGRETDIDSSSVLPQHASYNATPSHSQR 120
Query: 121 WHASDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEEHSVSARRRISIQLDNGSYMN 180
WHASDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEEHSVSARRRISIQLDNGSYMN
Sbjct: 121 WHASDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEEHSVSARRRISIQLDNGSYMN 180
Query: 181 TDTDIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQSHDIQLSGLSEDESEDGVW 240
TDTDIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQSHDIQLSGLSEDESEDGVW
Sbjct: 181 TDTDIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQSHDIQLSGLSEDESEDGVW 240
Query: 241 NWSVAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPP 300
NWSVAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPP
Sbjct: 241 NWSVAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPP 300
Query: 301 AATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSR 360
AATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSR
Sbjct: 301 AATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSR 360
Query: 361 NTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAVGAIEETNTSE 420
NTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAVGAIEETNTSE
Sbjct: 361 NTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAVGAIEETNTSE 420
Query: 421 HNVRVDEQPSSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVH 480
HNVRVDEQPSSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVH
Sbjct: 421 HNVRVDEQPSSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVH 480
Query: 481 VGTKKSWWSMF 491
VGTKKSWWSMF
Sbjct: 481 VGTKKSWWSMF 491
>Os12g0118700 Zinc finger, RING-type domain containing protein
Length = 499
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/488 (89%), Positives = 444/488 (90%)
Query: 4 HQFAGQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKATVLNDVERDEIXXXXXXXXXX 63
H A QPDVQCLVCTRPFTLDAQVTDTFEALAICRDCK TVLND ERDEI
Sbjct: 12 HPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDEITSTYRQNTRR 71
Query: 64 XXXXXXXXIDSLEDAFSQEFSQLIDLARRQGRETDIDSSSVLPQHASYNATPSHSQRWHA 123
ID LEDAF QEFSQLIDLARRQGRETDIDSSSV PQHAS+N+TPS SQRWHA
Sbjct: 72 RQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFNSTPSQSQRWHA 131
Query: 124 SDDESDGLNYVDSVFGEIESTISFGDYGADSDTSIEEHSVSARRRISIQLDNGSYMNTDT 183
SDDESDGLNYVDSVFGEIES IS GDYG DSDTSIEEHSV RRRISIQLDN SYMNTDT
Sbjct: 132 SDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQLDNDSYMNTDT 191
Query: 184 DIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQSHDIQLSGLSEDESEDGVWNWS 243
DIDPMNARLDQWDSDDQEDVEESGFDE +NTMTQHQQQSHDIQLSGLSEDESEDGVWNWS
Sbjct: 192 DIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSEDESEDGVWNWS 251
Query: 244 VAVRQRANVTNLLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPPAAT 303
V+VRQRANVTNLL+DME PEMRTTFVGNPDDYVDARQFEMLLEQFAEDN SRRGAPPAAT
Sbjct: 252 VSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNDSRRGAPPAAT 311
Query: 304 SFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTC 363
SFIENLPSVIIS SHQ N DVICPVCKDPIPTRARAKQLPCMHLYHSSCILPW SSRNTC
Sbjct: 312 SFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWLSSRNTC 371
Query: 364 PVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAVGAIEETNTSEHNV 423
PVCRYELPTDDAEYERSKQATTNVRDIQVVEE SDEQEVQVTRQMA G IEETNTSEHNV
Sbjct: 372 PVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGVIEETNTSEHNV 431
Query: 424 RVDEQPSSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHVGT 483
RVDEQP+SARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHV T
Sbjct: 432 RVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCRSPSATEVHVDT 491
Query: 484 KKSWWSMF 491
KKSWWSMF
Sbjct: 492 KKSWWSMF 499
>Os10g0487400 Zinc finger, RING-type domain containing protein
Length = 304
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 250 ANVTNLLEDME---GPEMRTTFVGNPDDYVDARQFEMLLEQFAEDNSSRRGAPPAATSFI 306
AN+ LL+D P + + DY E L+EQ E++ +R G PPAA S +
Sbjct: 90 ANIQVLLDDASVGLAPGIGRVGGASFGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSAL 149
Query: 307 ENLPSVIISTSH-QINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPV 365
LP V+++ + D C VCK+ AKQ+PC H+YH+ CI+PW N+CP+
Sbjct: 150 STLPDVVVTDAMVAAADGAECAVCKEDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPI 209
Query: 366 CRYELPTDDAEYERSKQA 383
CR+ELPTDD +YE K++
Sbjct: 210 CRFELPTDDPDYEGRKKS 227
>Os05g0110000 Zinc finger, RING-type domain containing protein
Length = 333
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 274 DYVDARQFEMLLEQF----AEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVC 329
D++ FE LL+Q A + R PPA+ + +E++P+V I+ SH + D C VC
Sbjct: 88 DFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESMPTVTIAASH-VGADSHCAVC 146
Query: 330 KDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQAT 384
K+P A+++PC H+YH CILPW + RN+CPVCR+E+PTD A S T
Sbjct: 147 KEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEMPTDAARPRPSNAGT 201
>Os06g0101300 Zinc finger, RING-type domain containing protein
Length = 338
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVI-CPVCKDP 332
DY E L++Q AE++ +R G PPAA S + LP V +S D C VC D
Sbjct: 149 DYFVGSGLEQLIQQLAENDPNRYGTPPAAKSAVAALPDVAVSADMMAADGGAQCAVCMDD 208
Query: 333 IPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEY 377
A AKQLPC H++H CILPW ++CPVCR+ELPTDD +
Sbjct: 209 FHLGAAAKQLPCKHVFHKDCILPWLDLHSSCPVCRFELPTDDPHH 253
>Os03g0351800 Zinc finger, RING-type domain containing protein
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 184 DIDPMNARLDQWDSDDQEDVEESGFDETINTMTQHQQQS--HDIQLSG----LSEDESED 237
D+D + D D D G E I+ + +H ++ + G S+ E E
Sbjct: 39 DVDALMRHFVGMDPDFHRD-PRFGIMEAISAVMRHGMAGTNREVDVRGRPNIFSDLEMEF 97
Query: 238 GVWNWSVAVRQRANVTN-------LLEDMEGPEMRTTFVGNPDDYVDARQFEMLLEQFAE 290
G W + Q + + G MR N DY + L+EQ +
Sbjct: 98 GSGPWLLFRGQLPGHLSEDNGFDVFINGRRGVGMRRA---NIADYFVGPGLDDLIEQLTQ 154
Query: 291 DNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHS 350
++ RRG PPA S I+ +P+V I+ H ++ D CPVCKD + A+++PC HLYHS
Sbjct: 155 ND--RRGPPPATQSSIDAMPTVKITQRH-LSGDSHCPVCKDKFELGSEAREMPCKHLYHS 211
Query: 351 SCILPWFSSRNTCPVCRYELP 371
CI+PW N+CPVCRYELP
Sbjct: 212 DCIVPWLEQHNSCPVCRYELP 232
>Os05g0488800 Zinc finger, RING-type domain containing protein
Length = 323
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 6/104 (5%)
Query: 273 DDYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDP 332
++YV +LL+ AE + SR G PPA +E LP+V +I + V C VC D
Sbjct: 152 EEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTV------KIEEVVSCSVCLDD 205
Query: 333 IPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAE 376
+ ++AKQ+PC H +HSSCILPW ++CPVCR+ELP+++ +
Sbjct: 206 LEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETK 249
>Os02g0727700 Zinc finger, RING-type domain containing protein
Length = 311
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 9/105 (8%)
Query: 306 IENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPV 365
+E+LP+V++ + D C VCKD + RA++LPC HLYH CILPW + RNTCP+
Sbjct: 214 VESLPTVVVDAARG---DTQCAVCKDGMEAGERARRLPCAHLYHDGCILPWLAIRNTCPL 270
Query: 366 CRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQVTRQMAV 410
CR+ELPTDD EYE K N D + RQ+++
Sbjct: 271 CRHELPTDDPEYENWKARRA------AAGGNGDGDRYGIIRQLSM 309
>Os08g0487500 Zinc finger, RING-type domain containing protein
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 296 RGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILP 355
+ PPAA S +E LPS +++ + C VC+D + R K+LPC H YH CI+P
Sbjct: 180 KSKPPAARSAVEALPSAVVAAGED-GEGEECAVCRDGVAAGERVKRLPCSHGYHEECIMP 238
Query: 356 WFSSRNTCPVCRYELPTDDAEYERSK 381
W RN+CP+CR+ELPTDD +YE K
Sbjct: 239 WLDVRNSCPLCRFELPTDDPQYESWK 264
>Os05g0495000
Length = 350
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 268 FVGNPDDYVDARQ------FEMLLEQFAED-NSSRRGAPPAATSFIENLPSVIISTSHQI 320
F G P V+ R E L EQ SSR+G PPA S I+ +P V IS H +
Sbjct: 175 FRGGPRVGVERRGGYYRAGLEALFEQLQNQLGSSRQGPPPAPPSAIDAMPVVTISRRH-L 233
Query: 321 NDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELP 371
+ CPVC+D A A+++PC HLYH+ CI+PW N+CPVCR+ LP
Sbjct: 234 RAEPRCPVCQDEFQLGAEAREMPCAHLYHADCIVPWLVHHNSCPVCRHSLP 284
>Os01g0802000 Zinc finger, RING-type domain containing protein
Length = 329
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 275 YVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIP 334
++ E L EQ N+ R+G PPA S I+++P V I+ H + DD CPVC D
Sbjct: 143 FLVGPSLEALFEQLLLHNN-RQGPPPAPQSAIDSMPVVKINLRH-LRDDPHCPVCTDKFE 200
Query: 335 TRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELP 371
A+++PC HLYH+ CI+PW N+CPVCR+ LP
Sbjct: 201 VGTEAREMPCKHLYHAECIIPWLVQHNSCPVCRHPLP 237
>Os01g0972000 Zinc finger, RING-type domain containing protein
Length = 334
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 30/176 (17%)
Query: 251 NVTNLLEDMEGPEMRTTFVGNPDDYV--------DARQFEMLLEQFAED----------- 291
N L D E P NP V DA F++L + A
Sbjct: 35 NAAGFLHDHEMPPAADHSPFNPPVIVLRRSASPDDATTFDLLYDDGASSALRPLFDRLLL 94
Query: 292 ---NSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLY 348
++S PPA+ + ++++P+++I H + D C VCK+P A A+++PC H+Y
Sbjct: 95 RIPSASDNPNPPASKAAVDSMPTILIGACH-LAADSHCAVCKEPFHLAAEAREMPCAHIY 153
Query: 349 HSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEENSDEQEVQV 404
H +CILPW + N+CPVCR+ +PTDD + +TN Q +SDE V
Sbjct: 154 HHNCILPWLALHNSCPVCRHRMPTDDHD-------STNAAAAQAAAGSSDEDATTV 202
>Os02g0767600
Length = 335
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 271 NPDDYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCK 330
+P +Y + L+E+ +++ R G PA +S I++LP+V I+ +H ++D CPVCK
Sbjct: 147 DPGNYFNGPNLNNLIEELTQND--RPGPAPAPSSAIDSLPTVQITGAH-LSDGSQCPVCK 203
Query: 331 DPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYEL 370
+ A+Q+PC H+YHS CI+PW N+CPVCRY+L
Sbjct: 204 EDFELGEAARQMPCKHVYHSDCIVPWLRLHNSCPVCRYQL 243
>Os03g0812200 Zinc finger, RING-type domain containing protein
Length = 369
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
Query: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPI 333
DY ++LL+ AE + +R G PPA +E LP+V I + + C VC +
Sbjct: 209 DYFLGPGLDILLQHLAESDLNRSGTPPAKKEAVEALPTV------NIQEVLGCSVCLEDF 262
Query: 334 PTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVV 393
AK++PC H +HS CILPW ++CP+CR++LPT E SK + I V
Sbjct: 263 EMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPT-----EESKNPCESAGGIVSV 317
Query: 394 EENSDE 399
++ D+
Sbjct: 318 NDDGDD 323
>Os06g0633500 Zinc finger, RING-type domain containing protein
Length = 124
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 326 CPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSK 381
C VCKD I A QLPC HLYH +CI PW + RN+CPVCRYELPTDD EYE+ +
Sbjct: 50 CAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEYEKRR 105
>Os03g0324900 Zinc finger, RING-type domain containing protein
Length = 320
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 294 SRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCI 353
+R+G PPA + LP+V + + CPVC D A+++PC H +H CI
Sbjct: 184 NRQGTPPARKEAVAALPTVRVHDAAG----ATCPVCLDEFEAGGEAREMPCKHRFHDGCI 239
Query: 354 LPWFSSRNTCPVCRYELPTDD 374
LPW + ++CPVCRY+LPTDD
Sbjct: 240 LPWLEAHSSCPVCRYQLPTDD 260
>Os01g0276600 Zinc finger, RING-type domain containing protein
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPI 333
DY + L+++ + ++ R+G PA +E++P+V ++ + D C VC +
Sbjct: 163 DYFLGPGLDALMQRVGDGDAGRQGTLPAKKEAVESMPTVEVAAGG--DCDSACAVCLEDY 220
Query: 334 PTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPT 372
RA ++PC H +H+ CI+PW ++CPVCR++LPT
Sbjct: 221 AAGERATEMPCRHRFHAKCIVPWLKMHSSCPVCRFQLPT 259
>Os03g0271600 Zinc finger, RING-type domain containing protein
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 281 FEMLLEQFA--EDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPIPTRAR 338
F LL+QF+ E + R PPA+ + +E++PSV ++ S C VC++ A
Sbjct: 96 FHRLLDQFSRLEAAAPR---PPASKAAVESMPSVTVAGS-----GAHCAVCQEAFEPGAS 147
Query: 339 AKQLPCMHLYHSSCILPWFSSRNTCPVCRYEL 370
A+++PC H+YH CILPW S RN+CPVCR EL
Sbjct: 148 AREMPCKHVYHQDCILPWLSLRNSCPVCRREL 179
>Os09g0434200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 281 FEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTS--HQINDDVICPVCKDPIPTRAR 338
E LE+ ++ + PPA+ + NLP V ++ ++ + C VC++ + +
Sbjct: 193 LEAALEESLQNVMANPKVPPASKEVVANLPVVTVTEEIIARLGKETQCAVCRESLLVDDK 252
Query: 339 AKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEY 377
++LPC HL+H C+ PW N+CP+CR+EL TDD Y
Sbjct: 253 MQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVY 291
>Os08g0464400 Zinc finger, RING-type domain containing protein
Length = 211
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 309 LPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRY 368
LP+V +S C +CKD +P A A++LPC HLYHS CI+ W RN+CPVCR
Sbjct: 62 LPTVEVS-----EPATACAICKDDLPLAAPARRLPCGHLYHSECIVQWLEMRNSCPVCRS 116
Query: 369 ELPTDDAE 376
LP+D+ +
Sbjct: 117 RLPSDEPQ 124
>Os09g0242800 Zinc finger, RING-type domain containing protein
Length = 163
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 274 DYVDARQFEMLLEQFAEDNSSRRGAPPAATSFIENLPSVIISTSHQINDDVICPVCKDPI 333
DYVD F + ED G + + P V+ +T+ +C VC + I
Sbjct: 26 DYVDEESFPV------EDPPPVAGGARGGRQAVVSQPPVVRATAGVAG--TVCSVCTEEI 77
Query: 334 PTRARAKQLPCMHLYHSSCILPWFSSRNTCPVCRYELPTDDAEYERSKQA 383
+LPC H YH+ CI PW R+TCP+CR ELP D E A
Sbjct: 78 AVADAVVRLPCAHWYHAGCISPWLGIRSTCPMCRAELPASDDAAEEGGGA 127
>Os02g0191500 Similar to Goliath homolog precursor (RING finger protein 130)
Length = 375
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 306 IENLPSVIISTSHQINDDVICPVCKDPIPTRARAKQLPCMHLYHSSCILPWFSSRNTCPV 365
+E+LP +S C VCKD + LPC H +H CI PW + R TCPV
Sbjct: 258 VESLPEATLSEEEASRG---CAVCKDSFASGQIVALLPCKHYFHGDCIWPWLTIRTTCPV 314
Query: 366 CRYELPTDDAEYER 379
CR+++ T+D +YE+
Sbjct: 315 CRHQVRTEDDDYEQ 328
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.129 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,871,943
Number of extensions: 726608
Number of successful extensions: 2729
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 2702
Number of HSP's successfully gapped: 25
Length of query: 491
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 386
Effective length of database: 11,553,331
Effective search space: 4459585766
Effective search space used: 4459585766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)