BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0388200 Os10g0388200|AK065918
(347 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0388200 Cyclin-like F-box domain containing protein 716 0.0
Os02g0504900 Cyclin-like F-box domain containing protein 110 2e-24
Os10g0409900 Cyclin-like F-box domain containing protein 102 5e-22
Os04g0380300 Cyclin-like F-box domain containing protein 100 1e-21
Os03g0167800 Cyclin-like F-box domain containing protein 98 7e-21
Os02g0748300 Similar to VMP3 protein 97 2e-20
Os03g0171600 Cyclin-like F-box domain containing protein 97 3e-20
Os11g0246200 Cyclin-like F-box domain containing protein 94 2e-19
Os10g0363600 Cyclin-like F-box domain containing protein 94 2e-19
Os07g0153400 Cyclin-like F-box domain containing protein 90 2e-18
Os02g0574900 Cyclin-like F-box domain containing protein 90 3e-18
Os11g0602800 Galactose oxidase, central domain containing p... 89 5e-18
Os06g0594400 Cyclin-like F-box domain containing protein 86 4e-17
Os04g0619300 Cyclin-like F-box domain containing protein 84 1e-16
Os02g0114600 Cyclin-like F-box domain containing protein 79 6e-15
Os02g0202900 Cyclin-like F-box domain containing protein 79 6e-15
AK110386 68 1e-11
>Os10g0388200 Cyclin-like F-box domain containing protein
Length = 347
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MMSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLC 60
MMSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLC
Sbjct: 1 MMSTLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLC 60
Query: 61 VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG
Sbjct: 61 VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
Query: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE
Sbjct: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
Query: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSWLQ 240
IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSWLQ
Sbjct: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSWLQ 240
Query: 241 GPMAMVRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGMIGLGDNIYLVGGVIG 300
GPMAMVRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGMIGLGDNIYLVGGVIG
Sbjct: 241 GPMAMVRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGMIGLGDNIYLVGGVIG 300
Query: 301 PGPRNQCIKPLSDVDILNVTSERPTWLPGSPMTHCRGSISGCALLRI 347
PGPRNQCIKPLSDVDILNVTSERPTWLPGSPMTHCRGSISGCALLRI
Sbjct: 301 PGPRNQCIKPLSDVDILNVTSERPTWLPGSPMTHCRGSISGCALLRI 347
>Os02g0504900 Cyclin-like F-box domain containing protein
Length = 385
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%)
Query: 4 TLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL- 62
LI GLP ++A CLA VP PV+ V W + + + E VR ++ E+ + VL
Sbjct: 47 ALIPGLPEDLAKICLALVPRSQFPVMGSVSKRWMSFLESKEFIAVRKEVGKLEEWVYVLT 106
Query: 63 --AFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
A + W++ K LP MP + A FGV + GKL+VI G
Sbjct: 107 ADAGSKGSHWEVLGCSGQKHSPLPPMPGPTK--AGFGVVVLDGKLFVIAG-------YAA 157
Query: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
DH + S+EV+ YD WV+ + M VAR FAC ++G I VAGGF S+S E
Sbjct: 158 DHGKECVSDEVYRYDSCLNRWVELSKMNVARCDFACAEVNGMIYVAGGFGPNGDSLSSVE 217
Query: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL 215
+Y+ E + W + LR+ C +GK++V+
Sbjct: 218 VYDAEQNKWTLIESLRRPR-WGCFACSFEGKLYVM 251
>Os10g0409900 Cyclin-like F-box domain containing protein
Length = 442
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 22/258 (8%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
L+ GLP+++A+ CL RVP + HP L++VC W + +R + E+ + V
Sbjct: 82 LLPGLPDDLAIACLIRVPRVEHPNLRIVCKRWNRLLSGNYYYSLRKRNGMAEEWVYVFKR 141
Query: 65 EPENM--WQLYDPLRDKWITLPVMPSQIRNIARFGVASVAG-KLYVIGGGSDRVDPLTGD 121
+ E W +DPL W +LP +P++ FG A ++G LY+ GG DPL G
Sbjct: 142 DREGKISWHAFDPLHQLWKSLPPVPAEYSEALGFGCAVLSGCYLYLFGGK----DPLRGS 197
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGG-FTNCRKSISKAE 180
R+ Y+ W + ML R F C ++ + VAGG ++++ AE
Sbjct: 198 MRRVVF------YNARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGGECEGIQRTLPSAE 251
Query: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL----HKGLPTVQILEDGNAWAVEDY 236
+Y+P + W + ++ G+V GK + H+ + + L N W+ D
Sbjct: 252 VYDPNRNRWACVAEMNNGMVPFI-GVVYDGKWFLKGLDSHRQVTSEVYLPSSNLWSTIDD 310
Query: 237 SWLQG---PMAMVRGELY 251
+ G P G+LY
Sbjct: 311 EMVTGWRNPSITFNGKLY 328
>Os04g0380300 Cyclin-like F-box domain containing protein
Length = 375
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
LI GLP ++A CLA VP PV+ V SW + + + E VR ++ E+ + L
Sbjct: 38 LIPGLPEDLAKVCLALVPRSYFPVMGAVSKSWMSFIGSKEFIAVRKEVGRLEERIYALIT 97
Query: 65 EPEN---MWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGD 121
W++ L + LP MP + A F V + GKL V+ G D
Sbjct: 98 GDGGKGPYWEVLGSLEQQNRMLPPMPGLTK--AGFSVVVLDGKLLVMAG-------YGVD 148
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
+ + S+EV+ YD W A M VAR FAC ++G + VAGGF + +S E+
Sbjct: 149 YGKECVSDEVYQYDARLNRWAALAKMNVARRDFACAEVNGAVYVAGGFGSDGDGLSSVEV 208
Query: 182 YNPEADTWEPLPDLRQAH--SSACSGLVIKGKMHVL 215
Y+P+ + W + LR+ S ACS GK++++
Sbjct: 209 YDPQRNKWTIIESLRRPRWGSFACS---FNGKLYIM 241
>Os03g0167800 Cyclin-like F-box domain containing protein
Length = 438
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 22/258 (8%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
L+ GLP+++A+ CL RVP L H L++VC W + +R ++ E+ + V
Sbjct: 78 LLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWNRLLSGNYYYSLRKKLGMAEEWVFVFKR 137
Query: 65 EPENM--WQLYDPLRDKWITLPVMPSQIRNIARFGVASVAG-KLYVIGGGSDRVDPLTGD 121
+ + W +DP+ W +LP +P++ FG A ++G LY+ GG DP+ G
Sbjct: 138 DRDRKISWHAFDPVHQVWKSLPPVPAEYSEAVGFGCAVLSGCYLYLFGGK----DPVRGS 193
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGG-FTNCRKSISKAE 180
R+ Y+ W++ ML R F C ++ + VAGG ++++ AE
Sbjct: 194 MRRVVF------YNARINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTLRSAE 247
Query: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL----HKGLPTVQILEDGNAWAV--- 233
Y+P + W + ++ G+V GK + H+ + + + N W+V
Sbjct: 248 FYDPNRNRWSYISEMSTGMVPFI-GVVYDGKWFLKGLDSHRQVVSEVYMPTSNVWSVTAD 306
Query: 234 EDYSWLQGPMAMVRGELY 251
E + + P G LY
Sbjct: 307 EMVTGWRNPSICFNGRLY 324
>Os02g0748300 Similar to VMP3 protein
Length = 426
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 42/324 (12%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
STLI + + ++ CLAR + + V ++ + VR+GEL K R Q+ E +
Sbjct: 85 STLISSIGRDNSISCLARCSRSDYGSIASVNRNFHSLVRSGELYKERRQLGIAEHWVYFS 144
Query: 63 AFEPENMWQLYDPLRDKWITLPVMP-SQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGD 121
E W+ YDP R +W+TLP MP ++ + +V +L V G
Sbjct: 145 CNVQE--WEAYDPYRSRWMTLPKMPHNECFMCSDKESLAVGTELLVFG------------ 190
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
+ S+ V SY L W M R +F + IVAGG + + AE+
Sbjct: 191 --KEILSHIVLSYSILTNSWSPGVDMNAPRCLFGSASFGEKAIVAGGMDAQGRVLRSAEL 248
Query: 182 YNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSW--- 238
YN E W LP + +A CSG+ + GK +V+ ++L G + +E +W
Sbjct: 249 YNSETKRWITLPCMNKAR-RMCSGVFMNGKFYVIGGMASNTEVLTCGEEYDLEKGTWRVI 307
Query: 239 ------LQGP------MAMVRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSR------ 280
L G +A+V ELY + + R N D + E R
Sbjct: 308 ENMSEGLNGASGAPPLVAVVENELYAAQYAGKL-VRKYNIKDNTWTTLGELPERPEAVNG 366
Query: 281 IGFGMIGLGDNIYLVGG--VIGPG 302
G G G+ + ++GG V+G G
Sbjct: 367 WGIAFRGCGERLLVIGGPRVMGGG 390
>Os03g0171600 Cyclin-like F-box domain containing protein
Length = 431
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 21/237 (8%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
S+LI + ++ + CL R+ + + + +R+ VRNGE+ ++R Q E +
Sbjct: 93 SSLIGAIGRDLTINCLLRLSRSDYGSVASLNKDFRSLVRNGEIYRLRRQSGVAEHWVYFS 152
Query: 63 AFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGDH 122
E W YDP R++WI +P MP + ++ SD+ G
Sbjct: 153 CNVLE--WDAYDPYRERWIQVPKMPPD--------------ECFMC---SDKESLAVGTE 193
Query: 123 DRIFA-SNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
+FA ++ V+ Y L W + PM+ R +F ++ VAGG + + +S AE+
Sbjct: 194 LLVFAMAHIVFRYSILTNSWTRADPMISPRCLFGSTSVGAKAYVAGGTDSSGRILSSAEM 253
Query: 182 YNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSW 238
Y+ E +W PLP + +A CSG+ + GK +V+ ++L G + ++ SW
Sbjct: 254 YDSETHSWTPLPSMNRAR-KMCSGVFMDGKFYVVGGVASNNKVLTCGEEYDLKRRSW 309
>Os11g0246200 Cyclin-like F-box domain containing protein
Length = 383
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 118/295 (40%), Gaps = 50/295 (16%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
LI G+P++VA+ CLARVP +H ++ VC WR++ + R + A EDL+ +L F
Sbjct: 23 LIPGMPDDVAVDCLARVPHGAHRAMRRVCRGWRSAAATPAFAMARAEAGANEDLVYLLQF 82
Query: 65 ----------------------EPENMWQLYDPLRDKWITLPVMPSQIRNIARFG-VASV 101
P +Y+ +W P + F A+V
Sbjct: 83 ANPAAAAAAAEEAKEDGDAPANSPAYGVAVYNVTTGEWRREKAAPP----VPMFAQCAAV 138
Query: 102 AGKLYVIGGGSDRVDPLTGDHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDG 161
+L V+GG D + AS VW P PM AR+ FAC G
Sbjct: 139 GTRLAVLGGWDPETFEPVADVHVLDASTGVWRSAP---------PMRSARSFFACAEAGG 189
Query: 162 NIIVAGGFTNCRKSISKAEIYNPEADTWEPLPDLRQAHSSACSG---------LVIKGKM 212
I VAGG + ++ AE Y+ AD W+PLPD+ + C G L + G
Sbjct: 190 RIYVAGGHDKHKNALKTAEAYDAVADAWDPLPDMSEERDE-CDGMATVAGDRFLAVSGYR 248
Query: 213 HVLHKGLPTVQILEDGNAWAVEDYSWLQGPMA----MVRGELYVLSNSCIMKQRG 263
G D A A ++ P + +VRG ++ + + +M+ G
Sbjct: 249 TARQGGFERDAEWFDPAARAWRRLDRVRAPPSAAHVVVRGRVWCIEGAAVMEWLG 303
>Os10g0363600 Cyclin-like F-box domain containing protein
Length = 475
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 161/405 (39%), Gaps = 100/405 (24%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
LI GLP+E++LQ LAR+P + + +MV SW+A++ EL +VR ++ +E+ L +L
Sbjct: 45 LIPGLPDEISLQILARMPRMGYLNAKMVSRSWKAAITGVELYRVRKELGVSEEWLYMLTK 104
Query: 65 EPEN--MWQLYDPLRDKWITLPVMPS------------------------QIRNIARF-- 96
+ +W +DP+ +W LP+MP ++ ++ R
Sbjct: 105 SDDGKLVWNAFDPVCGQWQRLPLMPGISHGGECKRGIPGLWLGDLLSAGIRVSDVIRGWL 164
Query: 97 --------------GVASVAGKLYVIGGGSDRVDPLTGDHDRIFASNEVWSYDPLCRLWV 142
+ +V G +YV+GG S R A VW YDP W
Sbjct: 165 GQRDSLDRLPFCGCAIGTVNGCIYVLGGFS-----------RGSAMKCVWRYDPFVNAWQ 213
Query: 143 QRAPMLVARAMFACCALDGNIIVAGGFTNCRKSIS---KAEIYNPEADTWEPLPDLRQAH 199
+ + M RA L+ + V GG + + ++ AE+++P W +PD+ +
Sbjct: 214 EVSSMSTGRAFCKASLLNNKLYVVGGVSKGKNGLAPLQSAEVFDPRTGIWVEVPDIPFSK 273
Query: 200 SSA-------------CSGLVIKGKMHVLHKGLPTVQILED--GNAWAVEDYSWLQGPMA 244
+ A +G+ G + + L + D G + E SW + P+
Sbjct: 274 AQALPTAFLAELLKPIATGMTSFGGKLYVPQSLYSWPFFVDVGGEIFDPETNSWAEMPVG 333
Query: 245 M----------------VRGELYVLSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGMIGL 288
M + G+LY L S + + D E ++ G + +
Sbjct: 334 MGEGWPARQAGTKLSAVIDGDLYALEPSTSSDRGKIKIYD-----PQEDAWKVAIGQVPV 388
Query: 289 GDNI-----YLVGGVIGPGPRNQCIKPL-SDVDILNVTSERPTWL 327
GD YL+ G + G N IK + S ++I+ +P L
Sbjct: 389 GDFAESECPYLLAGFL--GKLNLIIKDVDSKINIMQTDVLKPVEL 431
>Os07g0153400 Cyclin-like F-box domain containing protein
Length = 406
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRN-GELSKVRNQISATEDLLCV 61
+ LI GLP++ AL CL R+P +H ++VC W + + R + LL
Sbjct: 51 TPLIPGLPDDAALNCLLRLPVETHEACRLVCRRWHHLLADKARFFMQRKVMGFRSPLLFT 110
Query: 62 LAFEP---ENMWQLYDPLRDKWITLPVMPSQIRNIAR-FGVASVA--GKLYVIGGGSDRV 115
LAF + W++ D W T+P MP + R R FG ++ G L V GG +
Sbjct: 111 LAFHRCTGKIQWKVLDLNYLTWHTIPAMPCRDRACPRGFGCVAIPSDGTLLVCGGLVSDM 170
Query: 116 D-PLTGDHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRK 174
D PL + V YD W ML AR+ FA +DG + VAGG++ +
Sbjct: 171 DCPL----------HLVLKYDVYKNRWTVMTRMLAARSFFAGGVIDGRVYVAGGYSTDQF 220
Query: 175 SISKAEIYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHV 214
++ AE+ +P W+P+ + +S+ S VI G+++V
Sbjct: 221 ELNSAEVLDPVKGVWQPVASMGMNMASSDSA-VISGRLYV 259
>Os02g0574900 Cyclin-like F-box domain containing protein
Length = 460
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 103/238 (43%), Gaps = 58/238 (24%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
+I LP+E++ Q LAR+P L + L++V +W+A++ + ELS++R ++ TE+ L VL
Sbjct: 42 IIPTLPDELSFQILARLPRLYYLKLKLVSQAWKAAITSSELSQLRRELGLTEEWLYVLTK 101
Query: 65 EPENMWQLY--DPLRDKWITLPVMPS----------------QIRNIA------------ 94
N Y DPL KW LP MPS Q N+
Sbjct: 102 LEPNKLDCYALDPLFRKWQRLPPMPSFVSEEESTGRTQSSWFQTWNVVGSSIRIADFIKG 161
Query: 95 ----RFG----------VASVAGKLYVIGGGSDRVDPLTGDHDRIFASNEVWSYDPLCRL 140
R+G V G LYV GG S R A N V+ Y+P +
Sbjct: 162 WFRRRYGLDQMPFCGCSVGVADGCLYVFGGFS-----------RAVALNCVFRYNPCLNV 210
Query: 141 WVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKS---ISKAEIYNPEADTWEPLPDL 195
W + +PM+ RA L + V GG + R + E+++P+ W LP++
Sbjct: 211 WQEVSPMISGRAFSKAALLQSKLYVVGGVSRGRNGLLPLRSGEVFDPKTGIWSELPEM 268
>Os11g0602800 Galactose oxidase, central domain containing protein
Length = 432
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 40/322 (12%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
S LI + E+A+ CL P + ++ + S+ + +R+G+L ++R + E ++
Sbjct: 91 SELIGAIGRELAITCLLHTPRSYYGMIACLNRSFCSLMRSGQLYRLRREARIVEHMIYCS 150
Query: 63 AFEPENMWQLYDPLRDKWITLPVMPS-QIRNIARFGVASVAGKLYVIGGGSDRVDPLTGD 121
E W +DP R +W +P MP + +A +V + V G
Sbjct: 151 CNVLE--WDGFDPCRQRWFNIPSMPPIECFTLADKESLAVGTNILVFG------------ 196
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEI 181
+ ++ V Y L W M R +F + IVAGG + ++S AE+
Sbjct: 197 --KKVEAHVVLRYSLLSNSWTTGDMMNSPRCLFGSASFGEKAIVAGGIGD-NGTLSSAEL 253
Query: 182 YNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL-HKGLPTVQILEDGNAWAVEDYSWLQ 240
Y+ EA TW LP + +A CSG + GK +V+ K +IL G + +E +W
Sbjct: 254 YDSEAKTWTTLPSMNRAR-KMCSGFFMDGKFYVIGGKADNHNEILNCGEEFDLEKGTWRL 312
Query: 241 GP---------------MAMVRGELYVLSNSCIMKQRGVNFPDKMVSCAS---EFQSRIG 282
P +A+V ELY + +R + ++ S ++ S G
Sbjct: 313 IPDMASGLNGGSGAPPLVAVVNNELYAADYAEKEVRRYDKVNNAWITLGSLPEKYTSVNG 372
Query: 283 FGMI--GLGDNIYLVGGVIGPG 302
+G+ G GD + ++GG+ PG
Sbjct: 373 WGLAFRGCGDKLIVIGGMSAPG 394
>Os06g0594400 Cyclin-like F-box domain containing protein
Length = 381
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 109/248 (43%), Gaps = 40/248 (16%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
+ LI GLP EVA +CL RV F P ++ + W+A V + +++R L ++
Sbjct: 4 NELIPGLPEEVARECLIRVGFDQLPAVRRISRQWKAEVESPAYNRLRKAEGLARPALALV 63
Query: 63 AFE-------------------PENMWQ--LYDPLRDKWITLPVMPSQIRNIARF-GVAS 100
P N ++ L DP +W LP + ++ F VA+
Sbjct: 64 QARRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEGRWTPLPEVGGASGSLPLFCQVAA 123
Query: 101 VAG------KLYVIGGGSDRVDPLTGDHDRIFASNEVWSYDPLCRLWVQRAPML-VARAM 153
V G +L V+GG DP T ++ V YD L W + A M R+
Sbjct: 124 VDGGVEGRKRLVVVGG----WDPET-----WAPTDSVLVYDFLTGAWRRGAAMPGPRRSF 174
Query: 154 FACCALDGNIIVAGGFTNCRKSISKAEIYNPEADTWEPLPDLRQAHSSACSGLVIKGKMH 213
FAC A+ G + VAGG + ++ A Y+P+AD W LPD+ + GL + GK
Sbjct: 175 FACAAVGGKVFVAGGHDEEKNALRSALAYDPDADAWAALPDMAEERDEP-RGLCVDGKFL 233
Query: 214 VLHKGLPT 221
V+ G PT
Sbjct: 234 VV-GGYPT 240
>Os04g0619300 Cyclin-like F-box domain containing protein
Length = 455
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 129/314 (41%), Gaps = 44/314 (14%)
Query: 8 GLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATED---LLCVLAF 64
GL +++A CLA +P L + + + +G L ++R + E L C L
Sbjct: 116 GLHDDLAQDCLAWASRSDYPSLSCLNKKFNLLINSGYLYRLRRKYGIVEHWVYLACSLM- 174
Query: 65 EPENMWQLYDPLRDKWITLPVMP-SQIRNIARFGVASVAGKLYVIGGGSDRVDPLTGDHD 123
W+ +DP R +W+ LP MP + + A +V +L V G
Sbjct: 175 ----PWEAFDPSRKRWMRLPRMPCDECFSCADKESLAVGTQLLVFG-------------- 216
Query: 124 RIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAEIYN 183
R + +W Y+ L R W + PM + R +FA + IVAGG + + AE+YN
Sbjct: 217 REYTGLAIWMYNLLARGWSRCTPMNLPRCLFASGSFGEIAIVAGGCDKNGQVLKSAELYN 276
Query: 184 PEADTWEPLPDLRQAHSSACSGLVIKGKMHVLHKGLPTVQILEDGNAWAVEDYSWL---- 239
E WE LPD+ + SG + GK +V+ L G + +E +W
Sbjct: 277 SETGHWETLPDMNLPRRLS-SGFFMDGKFYVIGGVSSQRDSLTCGEEYNLETRTWRRIHD 335
Query: 240 ---------QGP--MAMVRGELYV---LSNSCIMKQRGVNFPDKMVSCASEFQSRIGFGM 285
Q P +A+V +LY +N +G N + + S G+G+
Sbjct: 336 MYPGGTSASQSPPLVAVVNNQLYAADQATNVVKKYDKGNNTWNIVKPLPVRADSSNGWGL 395
Query: 286 I--GLGDNIYLVGG 297
GD + ++GG
Sbjct: 396 AFKACGDRLLVIGG 409
>Os02g0114600 Cyclin-like F-box domain containing protein
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 40/315 (12%)
Query: 3 STLIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVL 62
++LI GLP+E+A+ CLARVP H L+ V WRA + + E R + + E + V+
Sbjct: 23 TSLIHGLPDEIAILCLARVPRRYHNALRCVSKRWRALLSSEEWHSCRKRNNLDEPWVYVI 82
Query: 63 AFEPENMWQLY--DPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
+ DP + V+ + + ++ +L+++GG S D
Sbjct: 83 CRSTGIKCYVLAPDPTTRSLKIMQVIEPPCSSREGISIETLDKRLFLLGGCSWLKD---- 138
Query: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
A++EV+ YD W APM AR F ALD + + GG KS + +
Sbjct: 139 ------ANDEVFCYDASSNCWSSVAPMPTARCYFVSAALDKKLYITGGLGLTDKSPNSWD 192
Query: 181 IYNPEADTW----EPL--PD----------LRQAHSSACSGLVIKGKMHVLHKGLPTVQI 224
IY+P ++W P+ PD L H +A + + G L + +
Sbjct: 193 IYDPVTNSWCVHKNPMLTPDIVKFVALDGELVTVHKAAWNRMYFAGIYDPLCRTWRGTEN 252
Query: 225 LEDGNAWAVEDYSWLQGPMAMVRGELYVLSNSCIMKQRGVNFPDK---MVSCASEFQSRI 281
E W+ G ++ G LY+L S K K M+ S+ +R
Sbjct: 253 -EIALCWS--------GSTVVMDGTLYMLEQSLGTKLMMWQKETKEWIMLGRLSDKLTRP 303
Query: 282 GFGMIGLGDNIYLVG 296
++G+G IY++G
Sbjct: 304 PCELVGIGRKIYIIG 318
>Os02g0202900 Cyclin-like F-box domain containing protein
Length = 436
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 5 LIDGLPNEVALQCLARVPFLSHPVLQMVCHSWRASVRNGELSKVRNQISATEDLLCVLAF 64
LI GLP+++A+ CL RVP H L++VC W + +R ++ E + +
Sbjct: 76 LIPGLPDDLAVACLIRVPRGDHWKLRLVCRRWSRLLAGNYFYGLRRRLGLAEQWVYAVKR 135
Query: 65 EPENM--WQLYDPLRDKWITLPVMPSQIRNIARFGVASVAG-KLYVIGGGSDRVDPLTGD 121
+ E W + DP R W LP +P + A FG A + G LY++GG R P+
Sbjct: 136 DGEGRVSWDVLDPARLAWRALPPVPGEYAGAAGFGCAVLGGCHLYLLGGSDPRRGPM--- 192
Query: 122 HDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVA-----GGFTNCRKSI 176
V Y W + ML R F CC + + VA G +
Sbjct: 193 -------RRVVFYSARSNRWHRAPDMLRRRHGFGCCVMGNRLYVAGGEGCGVGGGGGGGL 245
Query: 177 SKAEIYNPEADTWEPLPDL 195
E+++P + W + D+
Sbjct: 246 RSVEVFDPAKNRWSFVSDM 264
>AK110386
Length = 558
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 15/155 (9%)
Query: 61 VLAFEPENMWQLYDPLRDKWITLPVMPSQIRNIARFGVASVAGKLYVIGGGSDRVDPLTG 120
V++ + + + ++PL +W + M SQ R+ G A+V GK+Y +GG
Sbjct: 56 VVSKQSYDTAECFEPLTGEWTRVSSM-SQKRSAG--GAATVGGKVYAMGGF--------- 103
Query: 121 DHDRIFASNEVWSYDPLCRLWVQRAPMLVARAMFACCALDGNIIVAGGFTNCRKSISKAE 180
D AS E YDP W + APM R A A + V GG+ ++ + AE
Sbjct: 104 DGASQLASTEC--YDPALNAWRRVAPMTCRRRGLAAVAFKDEVYVFGGYDGVQR-FNSAE 160
Query: 181 IYNPEADTWEPLPDLRQAHSSACSGLVIKGKMHVL 215
Y+P D+W LP L C V+ ++VL
Sbjct: 161 AYSPATDSWRKLPALMNVRRDGCCAAVVGTAIYVL 195
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,326,476
Number of extensions: 579018
Number of successful extensions: 1421
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1385
Number of HSP's successfully gapped: 18
Length of query: 347
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 245
Effective length of database: 11,709,973
Effective search space: 2868943385
Effective search space used: 2868943385
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)