Os11g0246200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0246200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.81 | 0.652 | 13.7 | 0.951 | 1 | 1.15 | 1.33 | -1.91 | 0.836 | 20.2 | 12.49 | 10 | -- | -- |
| 201.61 | 0.666 | 13.7 | 0.946 | 1.11 | 0.971 | -0.628 | -- | 0.825 | 20.9 | 11.69 | 9 | -- | -- |
| 195.31 | 0.656 | 13.7 | 0.949 | 1.06 | 1.05 | -- | -1.18 | 0.824 | 20.6 | 12.56 | 9 | -- | -- |
| 202.56 | 0.667 | 13.7 | 0.968 | 1.04 | 1.07 | -- | -- | 0.828 | 20.4 | 11.53 | 9 | -- | -- |
| 225.77 | 0.704 | 13.7 | 0.946 | -- | 1.52 | -- | -1.03 | 0.85 | -- | 6.925 | 4 | -- | -- |
| 221.77 | 0.698 | 13.8 | 0.923 | 2.01 | -- | -0.866 | -- | 0.809 | 22.2 | -- | -- | -- | -- |
| 224.74 | 0.702 | 13.8 | 0.958 | 2.01 | -- | -- | -- | 0.811 | 22.2 | -- | -- | -- | -- |
| 232.45 | 0.713 | 13.7 | 0.962 | -- | 1.52 | -- | -- | 0.856 | -- | 6.459 | 4 | -- | -- |
| 225.35 | 0.703 | 13.7 | -- | 1 | 1.07 | -- | -- | 0.729 | 20.5 | 9.58 | 6 | -- | -- |
| 470.37 | 1.01 | 13.7 | 0.987 | -- | -- | -- | -- | 0.815 | -- | -- | -- | -- | -- |
| 248.94 | 0.738 | 13.8 | -- | 2.02 | -- | -- | -- | 0.705 | 22.2 | -- | -- | -- | -- |
| 256.67 | 0.749 | 13.7 | -- | -- | 1.53 | -- | -- | 0.742 | -- | 7.249 | 4 | -- | -- |
| 496.06 | 1.04 | 13.7 | -- | -- | -- | -- | -- | 0.706 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.54 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 15 |
| 2 | 180.07 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 16 | NA |
| 4 | 180.42 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 12 |
| 5 | 180.69 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 6 | 180.89 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 7 | 181.01 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 11 | 181.23 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 12 | 181.23 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 19 |
| 15 | 181.23 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 2 |
| 20 | 181.45 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 51 | 182.80 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 54 | 182.95 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 56 | 183.05 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 60 | 183.12 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 65 | 183.31 | atmosphere | 995 | 43200 | > th | dose independent | sin | 6 | NA |
| 76 | 183.75 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 78 | 183.81 | wind | 1 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 79 | 183.85 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 113 | 184.78 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 7 | 22 |
| 121 | 184.82 | atmosphere | 995 | 43200 | < th | dose independent | no | NA | NA |
| 129 | 184.86 | atmosphere | 995 | 43200 | < th | dose independent | sin | 6 | NA |
| 133 | 184.99 | humidity | 60 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 139 | 185.06 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 168 | 185.65 | humidity | 50 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 169 | 185.65 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 182 | 185.80 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 188 | 185.84 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 212 | 186.13 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 6 | 22 |
| 239 | 186.30 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 9 |
| 245 | 186.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 296 | 186.77 | atmosphere | 995 | 43200 | > th | dose independent | no | NA | NA |
| 309 | 186.82 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 327 | 186.96 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 345 | 187.18 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 361 | 187.44 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 391 | 187.77 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 394 | 187.78 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 468 | 188.24 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 489 | 188.33 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 9 | NA |
| 511 | 188.48 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 514 | 188.50 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 515 | 188.51 | wind | 3 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 550 | 188.65 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 554 | 188.65 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 558 | 188.68 | wind | 1 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 567 | 188.71 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 10 |
| 570 | 188.72 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 580 | 188.77 | wind | 5 | 14400 | < th | dose dependent | sin | 9 | NA |
| 617 | 188.92 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 650 | 189.05 | wind | 3 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 680 | 189.16 | wind | 1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 681 | 189.16 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 687 | 189.20 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 698 | 189.25 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 9 |
| 704 | 189.27 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 717 | 189.30 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 720 | 189.31 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 729 | 189.34 | humidity | 70 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 741 | 189.35 | wind | 3 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 760 | 189.43 | wind | 1 | 43200 | < th | dose independent | sin | 5 | NA |
| 770 | 189.47 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 786 | 189.52 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 13 |
| 792 | 189.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 807 | 189.56 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 836 | 189.69 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 845 | 189.71 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 846 | 189.71 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 865 | 189.75 | wind | 1 | 14400 | > th | dose dependent | sin | 10 | NA |
| 882 | 189.82 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 910 | 189.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 919 | 189.92 | humidity | 90 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 964 | 190.05 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 4 |