BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0475500 Os09g0475500|AK073003
(217 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0475500 Protein of unknown function DUF246, plant fami... 271 4e-73
Os06g0284200 Protein of unknown function DUF246, plant fami... 211 4e-55
Os01g0168600 Similar to Auxin-independent growth promoter-l... 166 8e-42
Os03g0328100 Similar to Axi 1 (Auxin-independent growth pro... 164 3e-41
Os03g0169000 Protein of unknown function DUF246, plant fami... 151 3e-37
Os09g0442900 Similar to Axi 1 (Auxin-independent growth pro... 115 2e-26
Os05g0451900 Similar to Axi 1 (Auxin-independent growth pro... 108 3e-24
Os12g0190100 Similar to Auxin-independent growth promoter-l... 100 7e-22
Os12g0174100 Protein of unknown function DUF246, plant fami... 99 2e-21
Os12g0425600 Protein of unknown function DUF246, plant fami... 95 4e-20
Os11g0176300 Protein of unknown function DUF246, plant fami... 93 2e-19
Os11g0481200 Protein of unknown function DUF246, plant fami... 93 2e-19
Os08g0537900 Similar to Ethylene-responsive transcription f... 90 1e-18
Os02g0158800 Protein of unknown function DUF246, plant fami... 89 2e-18
Os09g0412200 Protein of unknown function DUF246, plant fami... 89 3e-18
Os06g0545900 Protein of unknown function DUF246, plant fami... 79 2e-15
Os04g0551300 Similar to Growth regulator like protein 76 2e-14
Os05g0459600 Protein of unknown function DUF246, plant fami... 72 3e-13
Os05g0132500 Protein of unknown function DUF246, plant fami... 68 6e-12
>Os09g0475500 Protein of unknown function DUF246, plant family protein
Length = 217
Score = 271 bits (692), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 131/174 (75%), Positives = 131/174 (75%)
Query: 44 TSRELGRWSGCLTQPLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 103
TSRELGRWSGCLTQPLI
Sbjct: 44 TSRELGRWSGCLTQPLIVVERRFEAVAAAGSERAAASASAAAAARGERAESSASEAAVAA 103
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK
Sbjct: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQVW 217
DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQVW
Sbjct: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQVW 217
>Os06g0284200 Protein of unknown function DUF246, plant family protein
Length = 508
Score = 211 bits (536), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 96/113 (84%), Positives = 106/113 (93%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
LPPKRIY+NNGYLMVSCNGGLNQMRAAICDMV IARYLNVTL+VPELDKTSFW DPSEF+
Sbjct: 99 LPPKRIYRNNGYLMVSCNGGLNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQ 158
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
DIFDV++FI+SLRDEVRIL+ELPPR+KRRVE G SMPP+SWSDISYY NQ+
Sbjct: 159 DIFDVEHFITSLRDEVRILRELPPRVKRRVEHGMYHSMPPISWSDISYYHNQI 211
>Os01g0168600 Similar to Auxin-independent growth promoter-like protein
Length = 447
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 96/113 (84%), Gaps = 1/113 (0%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
L P+RIYK+NGYL+V+CNGGLNQMRA ICDMVTIARYLN+TL+VPELDK SFWAD SEF
Sbjct: 59 LVPRRIYKSNGYLLVTCNGGLNQMRAGICDMVTIARYLNLTLVVPELDKRSFWADSSEFG 118
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
DIFDV +FI+SLRDE+ I+KELP +LK + + + SMPPVSWS+ +YY +V
Sbjct: 119 DIFDVSHFINSLRDELMIVKELPMKLKLKTK-RRLYSMPPVSWSNETYYLKRV 170
>Os03g0328100 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 498
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 95/113 (84%), Gaps = 4/113 (3%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
+P +R+YK+NGYL++SCNGGLNQMRAAICDMVT+ARY+N+T++VPELDK SFWADPS+F
Sbjct: 87 VPRRRVYKSNGYLLISCNGGLNQMRAAICDMVTVARYMNLTMVVPELDKQSFWADPSDFG 146
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
DIFDV++FI+SL+DEV+I++ELP + R+V SM P+SWS YY Q+
Sbjct: 147 DIFDVNHFINSLQDEVKIIRELPQKFSRKVPF----SMQPISWSSEKYYLRQI 195
>Os03g0169000 Protein of unknown function DUF246, plant family protein
Length = 470
Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 87/110 (79%), Gaps = 1/110 (0%)
Query: 107 KRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIF 166
+R+YK+NGYL VSCNGGLNQMR+ ICDMV +AR LN+T++VPELDK SFWAD S F+DIF
Sbjct: 58 RRVYKSNGYLKVSCNGGLNQMRSEICDMVAVARLLNLTMVVPELDKRSFWADQSNFEDIF 117
Query: 167 DVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
DV +FI +LRDEV I+K+LP R + + +MPPVSWSD YY +Q+
Sbjct: 118 DVKHFIDTLRDEVHIVKQLPKRFGPE-DSNNILNMPPVSWSDEKYYLHQI 166
>Os09g0442900 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 638
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
Query: 107 KRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIF 166
K NGY++++ NGGLNQMR ICDMV +A+ L TL++P LD TSFWAD SEFKD+F
Sbjct: 236 KEDSHTNGYILINANGGLNQMRFGICDMVAVAKILKATLVLPSLDHTSFWADDSEFKDLF 295
Query: 167 DVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
+ +FI SL++++ I++ LPP K + + P+SWS ++YY++++
Sbjct: 296 NWRHFIESLKEDIDIVEMLPPAYKHIEPV----AKAPISWSKVNYYRDEI 341
>Os05g0451900 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 420
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 114 GYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYFIS 173
GYL+V NGGLNQMR I DMV +A+ +N +L++P LD SFW DPS+FKDIF+V++F
Sbjct: 27 GYLIVDANGGLNQMRMGISDMVAVAKIMNASLVIPTLDHQSFWTDPSDFKDIFNVEHFKE 86
Query: 174 SLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQN 214
L++++ I+ LPP KR Y+R+ P SWS SYY++
Sbjct: 87 ILKEDIVIVDSLPPTYKRVKP--YMRA--PTSWSRASYYRD 123
>Os12g0190100 Similar to Auxin-independent growth promoter-like protein
Length = 495
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 66/111 (59%), Gaps = 18/111 (16%)
Query: 115 YLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYFISS 174
Y+ V NGGLNQMR ICDMV +AR +N TL++P+LDK SFW D S FKDIF+ FI +
Sbjct: 97 YMTVRSNGGLNQMRTGICDMVAVARLVNATLVIPQLDKRSFWQDTSTFKDIFNEPRFIKA 156
Query: 175 LRDEVRILKELP------PRLKRRVELGYVRSMPPVSWSDISYYQ--NQVW 217
L +V I+ +LP PR ++ SWS SYY+ Q+W
Sbjct: 157 LEGDVSIVNDLPQSLQSVPRARKHF----------TSWSGASYYEEVKQLW 197
>Os12g0174100 Protein of unknown function DUF246, plant family protein
Length = 491
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
LPP +NGYLM+ NGGLNQ R +ICD V +A LN TL++P S W D S+F
Sbjct: 85 LPP-----SNGYLMIEANGGLNQQRLSICDAVAVASLLNATLVIPAFHFNSVWRDHSKFG 139
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVE--LGYVRSMPPVSWSDISYYQNQV 216
DIFD D+FI +L++ VR++KELP + R + + + +M ++S ++Y +V
Sbjct: 140 DIFDEDHFIETLKEHVRVVKELPVDVLTRFDHNISSIPNMRTKAYSSPNHYMQKV 194
>Os12g0425600 Protein of unknown function DUF246, plant family protein
Length = 567
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 111 KNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDY 170
+ NGYL V CNGGLNQ R+AIC+ V AR +N TL++PELD SFW D S F I+DV +
Sbjct: 130 ETNGYLRVRCNGGLNQQRSAICNAVVAARIMNATLVLPELDTNSFWRDKSGFPGIYDVPH 189
Query: 171 FISSLRDEVRILKELP 186
F+ +L+ +V I+ LP
Sbjct: 190 FLKTLKHDVHIVTSLP 205
>Os11g0176300 Protein of unknown function DUF246, plant family protein
Length = 559
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
LPP +NG+L++ NGGLNQ R +ICD V +A LN TL+ P S W D S+F
Sbjct: 137 LPP-----SNGFLIIEANGGLNQQRISICDAVAVASLLNATLVTPAFHLNSVWRDSSKFG 191
Query: 164 DIFDVDYFISSLRDEVRILKELPPR--LKRRVELGYVRSMPPVSWSDISYYQNQV 216
DIFD D+FI SLR +R++K+LP + + + +M ++S SYY +V
Sbjct: 192 DIFDEDHFIGSLRKYIRVVKKLPEDAFVNFDHNISMIPNMRTKAFSSESYYLQKV 246
>Os11g0481200 Protein of unknown function DUF246, plant family protein
Length = 525
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 111 KNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDY 170
++NGYL V CNGGLNQ R+AIC+ V AR +N TL++PELD SFW D S F I+DV +
Sbjct: 86 ESNGYLRVRCNGGLNQQRSAICNAVVAARIMNATLVLPELDTNSFWHDESGFLGIYDVLH 145
Query: 171 FISSLRDEVRILKELP 186
FI +L+ +VRI +P
Sbjct: 146 FIKTLKYDVRIAMVIP 161
>Os08g0537900 Similar to Ethylene-responsive transcription factor 3
(Ethylene-responsive element binding factor 3) (EREBP-3)
(AtERF3)
Length = 541
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 111 KNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDY 170
+ NGY+ + C GGLNQ+R +CD + +AR LN T+++P+ + ++W + S F D+FDVDY
Sbjct: 85 RRNGYIRIDCYGGLNQLRRDLCDGIAVARLLNATMVLPKFEVAAYWNESSGFADVFDVDY 144
Query: 171 FISSLRDEVRILKELPPRL-----------KRRVELGYVRSMPPV 204
FI R V ++K++P + KR+ YV ++ P
Sbjct: 145 FIEQTRGYVEVVKDMPEEIASKEPFKVDCSKRKGHFDYVETVLPA 189
>Os02g0158800 Protein of unknown function DUF246, plant family protein
Length = 573
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 104 LPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFK 163
+PP+ + +GY+ + GGLNQ R AIC+ V IA+ + TLI+P L + W D ++F+
Sbjct: 166 VPPEN--ETSGYIFIHAEGGLNQQRIAICNAVAIAKIMKATLILPVLKQDQIWKDQTKFE 223
Query: 164 DIFDVDYFISSLRDEVRILKELPPRLKRRVEL 195
DIFDVD+FI+ L+D+VRI++++P + EL
Sbjct: 224 DIFDVDHFINYLKDDVRIVRDIPDWFTEKDEL 255
>Os09g0412200 Protein of unknown function DUF246, plant family protein
Length = 512
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 15/104 (14%)
Query: 113 NGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYFI 172
GY+ V +GGLNQ R ICD V +A+ LN +L++P L+ W D S F++IFDVD+FI
Sbjct: 101 TGYIQVFLDGGLNQQRMGICDAVAVAKILNASLVIPHLEVNPVWKDTSSFEEIFDVDHFI 160
Query: 173 SSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
++L+ EV I+K LP + SWS YY +
Sbjct: 161 NTLKAEVSIVKVLPKKF---------------SWSTREYYGTGI 189
>Os06g0545900 Protein of unknown function DUF246, plant family protein
Length = 603
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 112 NNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYF 171
NNG++++S NGGLNQ R A+C+ V +A LN TL++P +S W D S+F DI+ DYF
Sbjct: 169 NNGFILISANGGLNQQRVAVCNAVVVAALLNATLVLPRFLYSSVWKDTSQFGDIYQEDYF 228
Query: 172 ISSLRDEVRILKELPPRLK 190
++ ++ +V I+K+LPP L+
Sbjct: 229 VNYMKSDVHIVKDLPPHLQ 247
>Os04g0551300 Similar to Growth regulator like protein
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%)
Query: 112 NNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYF 171
+ GYL++ +GGLNQ R I D V +AR LN TL+VPELD SFW D S+F DIFDVD+F
Sbjct: 102 STGYLLIGTSGGLNQQRIGITDAVVVARILNATLVVPELDHHSFWKDDSDFSDIFDVDWF 161
Query: 172 ISSLRDEVRILKELP 186
IS L +V I+K +P
Sbjct: 162 ISYLSKDVTIVKRIP 176
>Os05g0459600 Protein of unknown function DUF246, plant family protein
Length = 519
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 130 AICDMVTIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDYFISSLRDEVRILKELPPRL 189
AIC+ V IA +LN TL++P S W DPS F DI+D +F+ L+++VR+++++P +
Sbjct: 141 AICNAVAIAGFLNATLVIPNFHFHSIWRDPSTFSDIYDEAHFVKRLQNDVRVVEKVPDFI 200
Query: 190 KRRV--ELGYVRSMPPVSWSDISYYQNQV 216
R L V + +WS I YY++ V
Sbjct: 201 MERFGHNLSNVFNFKIKAWSPIQYYKDAV 229
>Os05g0132500 Protein of unknown function DUF246, plant family protein
Length = 291
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 8/119 (6%)
Query: 106 PKRIYK----NNGYLMVSCNGGLNQMRAAICDMVTIARYLNVTLIVPELDKTSFWAD-PS 160
P++IY +NG++ GG +++++ICD+V +AR LN TL++PE+ T+ S
Sbjct: 74 PRKIYPALDYHNGFIYAKIYGGFEKIQSSICDLVAVARLLNATLVIPEIQATTRAKGISS 133
Query: 161 EFKD---IFDVDYFISSLRDEVRILKELPPRLKRRVELGYVRSMPPVSWSDISYYQNQV 216
+FK ++D D FIS+L +V I++ LP L+ + ++ P + + YY +V
Sbjct: 134 KFKSFSYLYDEDQFISALSSDVAIVRGLPKDLREARKKIKFPTVSPKNSATPEYYVTEV 192
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,015,856
Number of extensions: 157759
Number of successful extensions: 331
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 326
Number of HSP's successfully gapped: 19
Length of query: 217
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 120
Effective length of database: 11,971,043
Effective search space: 1436525160
Effective search space used: 1436525160
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)