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Os11g0481200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF246, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0195) R2 : 0.717
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.65 (0.0484) R2dC : 0.717 R2C : 0.714
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0837 (0.0411) R2dN8 : 0.00332 R2N8 : 0.00046
σ : 0.368
deviance : 62.05
__
_____
C
peak time of C : 14.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
45.66 0.317 11.7 0.245 1.3 0.438 -0.875 -0.875 0.0796 15.3 10.01 121 -- --
47.21 0.32 11.6 0.212 1.32 0.412 -1.6 -- 0.0687 15.1 10.02 184 -- --
46.98 0.319 11.7 0.216 1.28 0.44 -- -1.35 0.063 15.3 10.02 142 -- --
55.69 0.348 11.7 0.238 1.29 0.405 -- -- 0.0731 15.3 10 169 -- --
50.39 0.331 11.7 0.158 -- 1.44 -- -1.67 0.0513 -- 1.27 375 -- --
51.94 0.338 11.6 0.326 1.65 -- -1.51 -- 0.125 14.8 -- -- -- --
59.84 0.362 11.6 0.289 1.65 -- -- -- 0.116 14.8 -- -- -- --
60.48 0.362 11.7 0.206 -- 1.43 -- -- 0.058 -- 1.45 379 -- --
57.03 0.352 11.7 -- 1.29 0.419 -- -- 0.0686 15.2 10 170 -- --
217.87 0.69 11.7 0.219 -- -- -- -- 0.0738 -- -- -- -- --
62.05 0.368 11.7 -- 1.65 -- -- -- 0.0837 14.8 -- -- -- --
60.92 0.364 11.7 -- -- 1.48 -- -- 0.0569 -- 0.54 417 -- --
219.13 0.691 11.7 -- -- -- -- -- 0.0495 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.00 radiation 1.0 270 > th dose independent sin 2 NA
2 42.13 radiation 1.0 270 < th dose independent sin 2 NA
3 42.38 radiation 1.0 270 < th dose independent rect. 23 21
5 42.48 radiation 10.0 270 < th dose dependent rect. 23 21
6 42.50 radiation 1.0 270 < th dose dependent sin 2 NA
7 42.64 humidity 60.0 90 > th dose dependent rect. 1 21
9 42.66 radiation 1.0 270 < th dose independent rect. 1 18
12 42.74 humidity 50.0 10 > th dose dependent rect. 2 20
15 42.78 humidity 90.0 270 < th dose independent rect. 7 17
19 42.81 radiation 1.0 270 > th dose independent rect. 18 21
24 42.88 radiation 1.0 270 > th dose independent rect. 5 10
27 42.92 temperature 10.0 10 > th dose dependent rect. 9 17
50 43.03 temperature 10.0 10 > th dose dependent rect. 22 16
62 43.13 temperature 10.0 90 > th dose dependent rect. 22 16
108 43.36 humidity 70.0 10 > th dose independent rect. 2 20
134 43.53 humidity 80.0 270 > th dose independent rect. 24 19
135 43.53 humidity 80.0 90 > th dose independent rect. 1 21
136 43.53 temperature 10.0 270 > th dose dependent rect. 20 17
183 43.65 wind 1.0 30 > th dose independent rect. 2 7
238 43.86 radiation 10.0 43200 < th dose dependent rect. 23 4
271 43.96 temperature 30.0 10 < th dose dependent rect. 2 20
300 44.07 wind 1.0 30 > th dose independent rect. 2 20
339 44.20 temperature 10.0 270 > th dose dependent rect. 21 2
351 44.24 temperature 10.0 270 > th dose dependent rect. 20 4
361 44.27 humidity 90.0 270 < th dose independent rect. 21 2
365 44.28 temperature 15.0 270 > th dose independent rect. 6 8
369 44.29 humidity 90.0 270 < th dose independent rect. 20 4
393 44.37 humidity 90.0 270 < th dose independent rect. 6 8
395 44.37 radiation 40.0 270 < th dose dependent rect. 24 10
407 44.39 temperature 30.0 10 < th dose dependent rect. 2 18
410 44.40 humidity 70.0 90 > th dose dependent sin 2 NA
412 44.40 radiation 30.0 90 < th dose dependent rect. 15 18
415 44.41 wind 7.0 10 < th dose independent rect. 9 17
421 44.42 radiation 40.0 30 < th dose independent rect. 2 20
442 44.46 radiation 30.0 90 < th dose independent rect. 1 10
468 44.50 radiation 20.0 10 < th dose independent rect. 2 20
469 44.50 radiation 20.0 90 < th dose independent rect. 1 21
474 44.51 radiation 20.0 270 < th dose independent rect. 24 19
488 44.54 humidity 50.0 90 > th dose dependent rect. 1 11
501 44.56 temperature 10.0 10 > th dose dependent rect. 22 4
537 44.62 wind 7.0 90 < th dose independent rect. 9 16
553 44.65 temperature 15.0 90 > th dose independent rect. 9 16
680 44.79 wind 7.0 270 < th dose independent rect. 20 17
695 44.80 humidity 90.0 270 < th dose dependent rect. 19 19
710 44.83 wind 7.0 10 < th dose independent rect. 22 16
729 44.85 wind 1.0 270 > th dose independent rect. 1 19
740 44.86 humidity 50.0 10 > th dose dependent rect. 2 10
759 44.89 humidity 80.0 10 < th dose independent rect. 9 7
765 44.89 radiation 1.0 270 < th dose dependent rect. 5 13
770 44.89 radiation 30.0 90 < th dose dependent rect. 11 22
781 44.91 humidity 90.0 90 < th dose independent rect. 22 16
786 44.91 temperature 15.0 10 > th dose dependent rect. 22 19
797 44.93 radiation 40.0 270 < th dose dependent rect. 11 8
811 44.95 wind 1.0 270 > th dose independent rect. 21 2
820 44.96 humidity 80.0 10 < th dose independent rect. 9 5
869 45.00 precipitation 0.1 270 < th dose independent rect. 20 15
874 45.00 precipitation 0.1 270 < th dose dependent rect. 20 15
895 45.03 precipitation 0.1 90 < th dose independent rect. 9 16
902 45.03 precipitation 0.1 90 < th dose dependent rect. 9 16
904 45.04 radiation 40.0 270 < th dose independent rect. 11 9
925 45.06 precipitation 0.1 270 < th dose independent rect. 21 2
927 45.06 humidity 50.0 270 > th dose independent rect. 1 18
928 45.06 precipitation 0.1 270 < th dose dependent rect. 21 2
938 45.07 wind 1.0 30 > th dose independent rect. 22 4
949 45.08 precipitation 0.1 10 < th dose independent rect. 9 17
955 45.08 precipitation 0.1 10 < th dose dependent rect. 9 17
981 45.10 radiation 30.0 90 < th dose dependent rect. 13 22
983 45.11 temperature 10.0 270 > th dose independent rect. 21 2
984 45.11 temperature 30.0 270 < th dose independent rect. 21 2
985 45.11 humidity 50.0 270 > th dose independent rect. 21 2
988 45.11 atmosphere 995.0 270 > th dose independent rect. 21 2
989 45.11 radiation 1.0 270 < th dose independent rect. 21 2
994 45.11 wind 7.0 270 < th dose independent rect. 6 8
997 45.11 wind 1.0 30 > th dose independent rect. 9 17
998 45.11 precipitation 0.1 270 < th dose independent rect. 20 17
1000 45.11 temperature 10.0 270 > th dose independent rect. 23 22