Os06g0284200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os06g0284200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.48 | 0.768 | 9.81 | 0.289 | 0.26 | -2.36 | 0.72 | -4.05 | -0.911 | 8.74 | 19.8 | 3964 | -- | -- |
| 269.81 | 0.765 | 9.65 | 0.441 | 0.226 | -1.26 | 0.958 | -- | -0.724 | 8.7 | 22.1 | 2097 | -- | -- |
| 269.15 | 0.764 | 9.81 | 0.31 | 0.257 | -2.37 | -- | -4.08 | -0.911 | 9.17 | 19.78 | 3963 | -- | -- |
| 268.9 | 0.764 | 9.66 | 0.365 | 0.236 | -1.2 | -- | -- | -0.765 | 9.64 | 22.34 | 1288 | -- | -- |
| 272.78 | 0.769 | 9.82 | 0.302 | -- | -2.37 | -- | -4.07 | -0.909 | -- | 19.77 | 3870 | -- | -- |
| 323.95 | 0.844 | 9.75 | -0.0601 | 0.31 | -- | 0.764 | -- | -1.17 | 9.73 | -- | -- | -- | -- |
| 326.08 | 0.846 | 9.75 | -0.0295 | 0.306 | -- | -- | -- | -1.17 | 10.2 | -- | -- | -- | -- |
| 270.96 | 0.767 | 9.66 | 0.381 | -- | -1.19 | -- | -- | -0.76 | -- | 22.25 | 1048 | -- | -- |
| 272.23 | 0.768 | 9.67 | -- | 0.249 | -1.12 | -- | -- | -0.821 | 8.77 | 22.36 | 1262 | -- | -- |
| 331.75 | 0.851 | 9.76 | -0.0339 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 326.11 | 0.845 | 9.75 | -- | 0.306 | -- | -- | -- | -1.16 | 10.2 | -- | -- | -- | -- |
| 274.25 | 0.771 | 9.68 | -- | -- | -1.09 | -- | -- | -0.824 | -- | 22.37 | 1001 | -- | -- |
| 331.78 | 0.85 | 9.75 | -- | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 254.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 2 | 256.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 3 | 256.38 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 10 | 259.08 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 19 | 260.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 23 | 261.22 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 36 | 262.71 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 41 | 263.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 46 | 263.17 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 47 | 263.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 53 | 263.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 57 | 263.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 69 | 263.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 79 | 263.69 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 15 |
| 108 | 264.12 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 109 | 264.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 122 | 264.23 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 124 | 264.25 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 130 | 264.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 149 | 264.45 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 154 | 264.48 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 296 | 265.57 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 367 | 266.05 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 571 | 267.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 648 | 267.55 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 721 | 267.95 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 811 | 268.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 891 | 268.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 900 | 268.76 | wind | 9 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 906 | 268.79 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 935 | 268.94 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 18 |
| 956 | 269.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 957 | 269.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 975 | 269.07 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |