Os09g0475500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os09g0475500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.95 | 0.497 | 6.17 | 1.05 | 0.378 | -1.55 | -0.858 | 2.89 | 0.163 | 14.8 | 25.41 | 4830 | -- | -- |
| 114.2 | 0.498 | 6.2 | 0.537 | 0.347 | -1.35 | -0.921 | -- | 0.274 | 14.5 | 22.6 | 8022 | -- | -- |
| 113.42 | 0.496 | 6.17 | 1.09 | 0.405 | -1.57 | -- | 3.14 | 0.16 | 14.1 | 26.07 | 4705 | -- | -- |
| 116.29 | 0.502 | 6.21 | 0.467 | 0.366 | -1.36 | -- | -- | 0.251 | 13.6 | 22.7 | 7500 | -- | -- |
| 119.18 | 0.508 | 6.16 | 1.18 | -- | -1.65 | -- | 3.37 | 0.201 | -- | 26.1 | 5420 | -- | -- |
| 170.67 | 0.612 | 6.34 | -0.302 | 0.425 | -- | -0.719 | -- | -0.316 | 14 | -- | -- | -- | -- |
| 172.46 | 0.615 | 6.34 | -0.324 | 0.424 | -- | -- | -- | -0.321 | 13.4 | -- | -- | -- | -- |
| 124 | 0.519 | 6.21 | 0.511 | -- | -1.39 | -- | -- | 0.263 | -- | 22.71 | 8088 | -- | -- |
| 118.39 | 0.507 | 6.25 | -- | 0.338 | -1.17 | -- | -- | 0.0894 | 13.3 | 23.03 | 5267 | -- | -- |
| 183.51 | 0.633 | 6.34 | -0.341 | -- | -- | -- | -- | -0.33 | -- | -- | -- | -- | -- |
| 175.23 | 0.619 | 6.33 | -- | 0.43 | -- | -- | -- | -0.285 | 13.4 | -- | -- | -- | -- |
| 125.4 | 0.522 | 6.25 | -- | -- | -1.2 | -- | -- | 0.102 | -- | 23.1 | 5267 | -- | -- |
| 186.58 | 0.638 | 6.33 | -- | -- | -- | -- | -- | -0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.58 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 2 | 110.59 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 5 | 110.72 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 27 | 111.33 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 9 |
| 65 | 111.64 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 73 | 111.68 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 86 | 111.78 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 96 | 111.86 | temperature | 25 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 140 | 112.22 | temperature | 25 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 163 | 112.38 | temperature | 20 | 14400 | > th | dose dependent | sin | 10 | NA |
| 168 | 112.42 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 230 | 112.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 251 | 113.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 369 | 113.72 | temperature | 25 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 381 | 113.79 | temperature | 25 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 384 | 113.80 | temperature | 25 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 496 | 114.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 548 | 114.30 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 20 |
| 579 | 114.37 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 589 | 114.40 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 628 | 114.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 629 | 114.51 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 21 |
| 636 | 114.53 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 684 | 114.61 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 686 | 114.61 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 698 | 114.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 716 | 114.64 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 21 |
| 719 | 114.65 | temperature | 25 | 14400 | < th | dose independent | sin | 16 | NA |
| 734 | 114.67 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 21 |
| 749 | 114.68 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 875 | 114.84 | temperature | 25 | 14400 | > th | dose independent | sin | 16 | NA |
| 877 | 114.84 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 970 | 114.93 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 21 |