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Os12g0425600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF246, plant family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.17 (0.0246) R2 : 0.625
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.77 (0.0644) R2dC : 0.621 R2C : 0.612
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.178 (0.0518) R2dN8 : 0.0126 R2N8 : 0.00369
σ : 0.464
deviance : 98.35
__
_____
C
peak time of C : 17.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.74 0.427 7.17 -0.449 1.79 -0.704 -0.602 1.28 0.28 17.3 30.6 1125 -- --
82.37 0.423 7.15 -0.241 1.77 -0.589 -0.641 -- 0.261 17.2 31.2 1057 -- --
83.33 0.425 7.16 -0.39 1.78 -0.667 -- 0.863 0.273 17.2 31.29 1099 -- --
83.27 0.425 7.15 -0.233 1.78 -0.57 -- -- 0.275 17.3 31.24 1093 -- --
151.11 0.573 7.24 -0.525 -- -1.53 -- 2.53 -0.0855 -- 27.4 414 -- --
97.14 0.462 7.17 -0.0909 1.77 -- -0.637 -- 0.171 17.4 -- -- -- --
98.14 0.464 7.18 -0.0894 1.76 -- -- -- 0.168 17.5 -- -- -- --
149.38 0.569 7.2 -0.454 -- -1.41 -- -- -0.111 -- 27.5 387 -- --
84.65 0.429 7.15 -- 1.78 -0.54 -- -- 0.293 17.3 31.3 1089 -- --
260.04 0.754 7.15 -0.148 -- -- -- -- 0.125 -- -- -- -- --
98.35 0.464 7.17 -- 1.77 -- -- -- 0.178 17.5 -- -- -- --
154.6 0.579 7.19 -- -- -1.36 -- -- -0.0519 -- 27.41 383 -- --
260.62 0.754 7.15 -- -- -- -- -- 0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.36 humidity 80 1440 < th dose dependent rect. 18 1
2 80.02 humidity 70 1440 > th dose independent rect. 17 2
4 80.19 radiation 10 1440 > th dose independent rect. 17 13
5 80.23 humidity 70 1440 > th dose independent rect. 17 16
6 80.32 radiation 10 1440 > th dose independent rect. 17 1
20 80.47 humidity 70 1440 > th dose independent rect. 17 7
21 80.47 humidity 70 1440 > th dose independent rect. 17 14
47 80.88 temperature 25 720 > th dose dependent rect. 17 3
51 81.06 temperature 30 720 > th dose independent rect. 16 3
68 81.24 radiation 40 1440 < th dose dependent rect. 17 7
71 81.39 temperature 30 720 < th dose independent rect. 15 8
74 81.46 temperature 30 720 < th dose independent rect. 15 16
85 81.57 radiation 10 1440 < th dose dependent rect. 17 11
87 81.59 radiation 40 1440 < th dose dependent rect. 17 9
97 81.64 radiation 10 1440 < th dose independent rect. 17 1
98 81.65 humidity 70 1440 > th dose independent sin 12 NA
115 81.85 wind 9 43200 > th dose independent rect. 16 5
118 81.85 radiation 10 1440 > th dose dependent rect. 17 13
121 81.88 wind 9 43200 > th dose dependent rect. 14 10
125 81.91 humidity 70 1440 < th dose independent rect. 16 2
141 81.92 radiation 10 1440 > th dose dependent rect. 17 1
153 81.93 wind 7 43200 > th dose dependent rect. 16 6
159 81.97 wind 9 43200 < th dose independent rect. 16 5
168 82.03 humidity 70 1440 < th dose independent rect. 16 15
173 82.05 humidity 70 1440 < th dose independent rect. 16 4
185 82.06 radiation 10 1440 < th dose independent rect. 17 7
192 82.12 humidity 70 1440 < th dose independent rect. 16 17
196 82.14 temperature 30 720 < th dose independent rect. 17 10
236 82.30 wind 9 43200 > th dose independent rect. 14 10
238 82.31 wind 9 43200 > th dose independent rect. 14 12
240 82.32 temperature 30 720 < th dose independent rect. 15 12
243 82.35 wind 9 43200 < th dose independent rect. 14 13
250 82.39 wind 9 43200 < th dose independent rect. 14 11
251 82.39 radiation 10 1440 < th dose independent rect. 17 11
307 82.68 wind 7 43200 > th dose independent rect. 19 1
310 82.69 temperature 30 720 < th dose independent sin 12 NA
324 82.75 wind 9 43200 < th dose independent sin 15 NA
335 82.80 wind 9 43200 > th dose independent sin 15 NA
339 82.83 temperature 30 720 > th dose independent sin 12 NA
396 82.99 wind 7 43200 > th dose dependent sin 15 NA
478 83.28 wind 9 43200 > th dose dependent rect. 12 12
484 83.30 wind 9 43200 > th dose dependent rect. 12 14
492 83.31 humidity 80 1440 < th dose dependent rect. 17 16
500 83.33 wind 5 43200 < th dose independent rect. 19 2
576 83.49 humidity 70 720 < th dose independent sin 12 NA
594 83.54 wind 9 43200 < th dose independent rect. 17 13
596 83.55 wind 7 43200 > th dose dependent rect. 17 1
623 83.62 temperature 30 14400 > th dose dependent rect. 17 1
649 83.67 wind 9 43200 > th dose independent rect. 16 14
689 83.73 wind 7 43200 > th dose dependent rect. 15 3
715 83.78 radiation 10 1440 > th dose independent sin 12 NA
720 83.78 humidity 50 1440 > th dose dependent rect. 18 1
750 83.82 humidity 70 4320 < th dose independent rect. 19 1
841 83.98 humidity 80 1440 < th dose independent rect. 7 2
850 84.00 temperature 30 14400 > th dose independent rect. 17 1
879 84.03 radiation 10 1440 > th dose independent rect. 15 18
938 84.09 humidity 60 14400 < th dose independent rect. 17 1