Os05g0451900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Axi 1 (Auxin-independent growth promoter)-like protein.
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Os05g0451900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Axi 1 (Auxin-independent growth promoter)-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.11 | 0.423 | 7.51 | 0.177 | 2.09 | 1.15 | 0.702 | 0.626 | 0.0516 | 6.41 | 40.5 | 270 | -- | -- |
| 81.94 | 0.422 | 7.51 | 0.184 | 2.09 | 1.13 | 0.819 | -- | 0.0558 | 6.37 | 40.53 | 275 | -- | -- |
| 82.26 | 0.422 | 7.51 | 0.188 | 2.08 | 1.17 | -- | 0.792 | 0.0501 | 6.39 | 41.98 | 275 | -- | -- |
| 83.48 | 0.426 | 7.51 | 0.198 | 2.06 | 1.12 | -- | -- | 0.0547 | 6.52 | 33.01 | 269 | -- | -- |
| 111.45 | 0.492 | 7.51 | -0.0971 | -- | 2.65 | -- | -0.0354 | -0.0275 | -- | 3.792 | 648 | -- | -- |
| 96.78 | 0.461 | 7.52 | 0.125 | 2.58 | -- | 0.99 | -- | -0.0266 | 5.39 | -- | -- | -- | -- |
| 99.21 | 0.466 | 7.53 | 0.127 | 2.59 | -- | -- | -- | -0.031 | 5.38 | -- | -- | -- | -- |
| 100.88 | 0.468 | 7.54 | 0.264 | -- | 2.98 | -- | -- | 0.127 | -- | 4.497 | 664 | -- | -- |
| 84.52 | 0.428 | 7.51 | -- | 2.09 | 1.11 | -- | -- | 0.0292 | 6.44 | 35.94 | 270 | -- | -- |
| 448.61 | 0.99 | 7.56 | 0.215 | -- | -- | -- | -- | 0.0329 | -- | -- | -- | -- | -- |
| 99.64 | 0.467 | 7.53 | -- | 2.59 | -- | -- | -- | -0.0452 | 5.38 | -- | -- | -- | -- |
| 102.55 | 0.472 | 7.55 | -- | -- | 3 | -- | -- | 0.102 | -- | 5.47 | 667 | -- | -- |
| 449.83 | 0.99 | 7.57 | -- | -- | -- | -- | -- | 0.00913 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.30 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 3 | 78.29 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 4 | 78.58 | radiation | 40 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 8 | 78.91 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 22 |
| 10 | 78.94 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 27 | 79.58 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 35 | 79.85 | radiation | 20 | 270 | < th | dose independent | rect. | 2 | 19 |
| 42 | 80.07 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 11 |
| 46 | 80.10 | radiation | 30 | 270 | < th | dose dependent | rect. | 13 | 22 |
| 66 | 80.43 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 2 | 19 |
| 90 | 80.67 | radiation | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 93 | 80.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 102 | 80.82 | radiation | 40 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 103 | 80.82 | radiation | 40 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 113 | 80.88 | radiation | 1 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 122 | 80.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 15 |
| 127 | 81.00 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 4 | 19 |
| 139 | 81.11 | radiation | 40 | 270 | < th | dose dependent | no | NA | NA |
| 153 | 81.21 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 156 | 81.23 | temperature | 15 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 158 | 81.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 177 | 81.34 | radiation | 1 | 270 | > th | dose dependent | rect. | 6 | 12 |
| 194 | 81.38 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 203 | 81.43 | radiation | 1 | 270 | > th | dose dependent | sin | 22 | NA |
| 272 | 81.54 | radiation | 1 | 270 | > th | dose dependent | no | NA | NA |
| 325 | 81.59 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 21 | 19 |
| 331 | 81.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 334 | 81.61 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 355 | 81.72 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 23 | 20 |
| 356 | 81.73 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 8 |
| 369 | 81.78 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 23 | 19 |
| 392 | 81.91 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 19 |
| 426 | 81.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 455 | 82.09 | temperature | 30 | 90 | < th | dose independent | rect. | 4 | 17 |
| 469 | 82.12 | radiation | 20 | 270 | < th | dose independent | rect. | 13 | 22 |
| 470 | 82.12 | radiation | 20 | 270 | > th | dose independent | rect. | 11 | 23 |
| 477 | 82.14 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 579 | 82.47 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 23 |
| 583 | 82.48 | radiation | 20 | 270 | > th | dose independent | sin | 22 | NA |
| 600 | 82.53 | radiation | 20 | 270 | < th | dose independent | sin | 22 | NA |
| 621 | 82.58 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 19 |
| 633 | 82.60 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 649 | 82.65 | radiation | 20 | 270 | < th | dose independent | rect. | 8 | 23 |
| 738 | 82.85 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 16 |
| 865 | 82.94 | temperature | 25 | 270 | > th | dose dependent | rect. | 20 | 20 |
| 873 | 82.96 | humidity | 70 | 270 | > th | dose independent | rect. | 2 | 19 |
| 877 | 82.97 | radiation | 20 | 270 | > th | dose independent | rect. | 7 | 10 |
| 912 | 82.99 | radiation | 20 | 270 | < th | dose independent | rect. | 15 | 23 |
| 917 | 83.00 | radiation | 20 | 270 | > th | dose independent | no | NA | NA |