Os12g0190100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin-independent growth promoter-like protein.
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Os12g0190100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin-independent growth promoter-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.09 | 0.443 | 7.83 | -0.964 | 0.654 | -0.325 | -0.00835 | -3.68 | -0.0754 | 21.3 | 30 | 4294 | -- | -- |
| 91.2 | 0.445 | 7.74 | -0.308 | 0.695 | -0.628 | -0.0039 | -- | 0.0651 | 21 | 29.7 | 4313 | -- | -- |
| 89.09 | 0.44 | 7.83 | -0.964 | 0.654 | -0.324 | -- | -3.69 | -0.0754 | 21.3 | 30 | 4293 | -- | -- |
| 90.31 | 0.443 | 7.74 | -0.374 | 0.644 | -0.708 | -- | -- | -0.0133 | 21.1 | 29.9 | 4320 | -- | -- |
| 113.86 | 0.497 | 7.81 | -0.999 | -- | -0.298 | -- | -3.62 | -0.0744 | -- | 29.87 | 4319 | -- | -- |
| 110.28 | 0.492 | 7.73 | -0.539 | 0.639 | -- | -0.0987 | -- | 0.0621 | 20.9 | -- | -- | -- | -- |
| 110.31 | 0.492 | 7.73 | -0.536 | 0.639 | -- | -- | -- | 0.062 | 20.9 | -- | -- | -- | -- |
| 115.2 | 0.5 | 7.73 | -0.356 | -- | -0.718 | -- | -- | -0.0275 | -- | 29.9 | 4329 | -- | -- |
| 93.15 | 0.45 | 7.73 | -- | 0.628 | -0.775 | -- | -- | 0.00669 | 21.2 | 29.9 | 4315 | -- | -- |
| 133.66 | 0.54 | 7.72 | -0.535 | -- | -- | -- | -- | 0.0576 | -- | -- | -- | -- | -- |
| 117.87 | 0.508 | 7.72 | -- | 0.64 | -- | -- | -- | 0.122 | 20.8 | -- | -- | -- | -- |
| 118.1 | 0.506 | 7.73 | -- | -- | -0.794 | -- | -- | -0.00692 | -- | 29.86 | 4327 | -- | -- |
| 141.22 | 0.555 | 7.7 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.65 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 8 | 84.81 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 27 | 86.08 | temperature | 30 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 31 | 86.10 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 35 | 86.17 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 39 | 86.20 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 58 | 86.42 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 136 | 86.86 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 137 | 86.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 142 | 86.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 149 | 87.11 | wind | 1 | 4320 | > th | dose independent | rect. | 2 | 3 |
| 150 | 87.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 158 | 87.20 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 174 | 87.37 | temperature | 30 | 4320 | < th | dose independent | sin | 9 | NA |
| 175 | 87.37 | wind | 1 | 4320 | < th | dose independent | rect. | 2 | 3 |
| 178 | 87.43 | temperature | 30 | 4320 | > th | dose independent | sin | 9 | NA |
| 197 | 87.48 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 18 |
| 239 | 87.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 273 | 87.82 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 274 | 87.83 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 6 |
| 335 | 88.18 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 424 | 88.39 | temperature | 30 | 4320 | > th | dose dependent | sin | 8 | NA |
| 427 | 88.41 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 13 |
| 534 | 88.70 | temperature | 10 | 720 | > th | dose dependent | sin | 9 | NA |
| 548 | 88.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 560 | 88.80 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 563 | 88.82 | temperature | 30 | 270 | < th | dose dependent | sin | 7 | NA |
| 668 | 88.98 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 14 |
| 677 | 89.00 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 738 | 89.08 | wind | 1 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 751 | 89.11 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |
| 850 | 89.12 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 854 | 89.13 | temperature | 30 | 4320 | < th | dose independent | no | NA | NA |
| 897 | 89.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 21 |