Os12g0174100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os12g0174100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.97 | 0.248 | 11.8 | -1.31 | 1.26 | -1.48 | 0.516 | -1.44 | -0.317 | 6.06 | 21.1 | 5834 | -- | -- |
| 28.21 | 0.247 | 11.8 | -1.32 | 1.26 | -0.884 | 0.537 | -- | -0.346 | 6.07 | 23.1 | 5703 | -- | -- |
| 28.6 | 0.249 | 11.8 | -1.31 | 1.27 | -1.44 | -- | -1.35 | -0.321 | 6.06 | 21.2 | 6061 | -- | -- |
| 28.84 | 0.25 | 11.8 | -1.32 | 1.27 | -0.88 | -- | -- | -0.352 | 6.06 | 23.21 | 6046 | -- | -- |
| 111.4 | 0.492 | 11.8 | -1.3 | -- | -1.46 | -- | -1.25 | -0.31 | -- | 21.4 | 5636 | -- | -- |
| 37.31 | 0.286 | 11.8 | -0.865 | 1.28 | -- | 0.462 | -- | -0.145 | 6.04 | -- | -- | -- | -- |
| 37.84 | 0.288 | 11.8 | -0.861 | 1.28 | -- | -- | -- | -0.147 | 6.04 | -- | -- | -- | -- |
| 111.11 | 0.491 | 11.9 | -1.35 | -- | -0.922 | -- | -- | -0.386 | -- | 24.2 | 4224 | -- | -- |
| 56.68 | 0.353 | 11.8 | -- | 1.27 | -0.227 | -- | -- | -0.0762 | 5.97 | 23.21 | 6046 | -- | -- |
| 122.58 | 0.517 | 11.8 | -0.824 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 57.38 | 0.354 | 11.8 | -- | 1.27 | -- | -- | -- | -0.0506 | 6.07 | -- | -- | -- | -- |
| 124.2 | 0.519 | 11.8 | -- | -- | 1 | -- | -- | 0.0893 | -- | 45.21 | 356 | -- | -- |
| 140.5 | 0.553 | 11.8 | -- | -- | -- | -- | -- | -0.0261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.72 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 16 | 25.92 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 37 | 26.00 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 46 | 26.05 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 47 | 26.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 48 | 26.12 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 49 | 26.15 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 51 | 26.19 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 52 | 26.20 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 54 | 26.20 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 56 | 26.23 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 57 | 26.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 63 | 26.29 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 64 | 26.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 66 | 26.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 67 | 26.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 70 | 26.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 71 | 26.37 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 74 | 26.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 75 | 26.38 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 84 | 26.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 85 | 26.41 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 87 | 26.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 91 | 26.42 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 95 | 26.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 97 | 26.42 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 111 | 26.46 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 115 | 26.46 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 17 |
| 116 | 26.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 119 | 26.47 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 134 | 26.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 141 | 26.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 143 | 26.49 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 17 |
| 146 | 26.50 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 147 | 26.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 148 | 26.50 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 154 | 26.50 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 162 | 26.51 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 187 | 26.54 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 203 | 26.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 207 | 26.55 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 208 | 26.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 236 | 26.55 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 267 | 26.57 | radiation | 1.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 268 | 26.57 | radiation | 1.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 298 | 26.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 308 | 26.58 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 329 | 26.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 484 | 26.69 | humidity | 60.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 508 | 26.69 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 520 | 26.70 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 20 |
| 527 | 26.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 536 | 26.71 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 539 | 26.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 616 | 26.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 634 | 26.78 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 674 | 26.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 685 | 26.80 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 703 | 26.81 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 732 | 26.82 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 776 | 26.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 785 | 26.83 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 792 | 26.84 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 816 | 26.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 832 | 26.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 844 | 26.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 852 | 26.87 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 917 | 26.87 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 935 | 26.88 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 936 | 26.88 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 944 | 26.89 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 982 | 26.90 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 4 |