Os02g0158800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os02g0158800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.35 | 0.471 | 5.28 | -0.627 | 0.956 | 1 | -0.0189 | -1.87 | 0.448 | 21.6 | 29.6 | 11 | -- | -- |
| 104.68 | 0.48 | 5.32 | -0.961 | 0.95 | 1 | -0.429 | -- | 0.359 | 21.6 | 29.6 | 11 | -- | -- |
| 100.35 | 0.467 | 5.28 | -0.627 | 0.956 | 1 | -- | -1.87 | 0.448 | 21.6 | 29.6 | 11 | -- | -- |
| 105.17 | 0.478 | 5.32 | -0.949 | 0.95 | 1.01 | -- | -- | 0.366 | 21.6 | 28.5 | 9 | -- | -- |
| 150.31 | 0.574 | 5.24 | -0.531 | -- | 1.42 | -- | -1.87 | 0.522 | -- | 29.6 | 11 | -- | -- |
| 118.84 | 0.511 | 5.37 | -1.2 | 1.12 | -- | -0.457 | -- | 0.16 | 22.7 | -- | -- | -- | -- |
| 119.71 | 0.512 | 5.37 | -1.18 | 1.12 | -- | -- | -- | 0.161 | 22.6 | -- | -- | -- | -- |
| 155.17 | 0.58 | 5.27 | -0.835 | -- | 1.43 | -- | -- | 0.457 | -- | 28.5 | 5 | -- | -- |
| 126.19 | 0.523 | 5.3 | -- | 0.96 | 1.39 | -- | -- | 0.522 | 21.1 | 28.5 | 14 | -- | -- |
| 196.98 | 0.656 | 5.34 | -1.16 | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
| 156.63 | 0.585 | 5.34 | -- | 1.11 | -- | -- | -- | 0.293 | 22.6 | -- | -- | -- | -- |
| 172.38 | 0.611 | 5.24 | -- | -- | 1.66 | -- | -- | 0.588 | -- | 28.42 | 3 | -- | -- |
| 232.63 | 0.712 | 5.31 | -- | -- | -- | -- | -- | 0.296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.13 | temperature | 30 | 10 | < th | dose dependent | sin | 5 | NA |
| 3 | 91.02 | temperature | 10 | 10 | > th | dose dependent | sin | 5 | NA |
| 44 | 94.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 13 |
| 79 | 95.62 | temperature | 15 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 90 | 95.89 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 11 |
| 107 | 96.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 150 | 97.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 4 | 8 |
| 215 | 98.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 20 |
| 222 | 98.22 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 224 | 98.23 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 13 |
| 242 | 98.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 311 | 99.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 16 |
| 318 | 99.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 395 | 99.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 10 |
| 427 | 99.69 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 443 | 99.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 471 | 99.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 473 | 99.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 552 | 100.22 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 581 | 100.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 606 | 100.37 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 619 | 100.43 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 659 | 100.56 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 681 | 100.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 3 |
| 687 | 100.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 693 | 100.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 716 | 100.76 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 756 | 100.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 879 | 101.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 920 | 101.34 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 953 | 101.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 973 | 101.45 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 990 | 101.49 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |