BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0294300 Os09g0294300|AK107258
(433 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain contai... 869 0.0
Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain contai... 501 e-142
Os01g0677500 361 e-100
Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 346 2e-95
Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain contai... 343 1e-94
Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain contai... 339 2e-93
Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain contai... 305 6e-83
Os05g0153100 263 1e-70
Os01g0229900 Similar to Shaggy-related protein kinase dzeta... 130 3e-30
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 75 1e-13
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 74 3e-13
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 72 6e-13
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 72 1e-12
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 71 1e-12
Os03g0791800 Rad6 (Ubiquitin carrier protein) 69 6e-12
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 69 7e-12
Os07g0166800 Rad6 (Ubiquitin carrier protein) 69 9e-12
Os05g0182500 Rad6 (Ubiquitin carrier protein) 66 6e-11
>Os09g0294300 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 433
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/433 (96%), Positives = 417/433 (96%)
Query: 1 MAEGEGSSSRRWALGDPDVVEVSPEXXXXXXXXXXXXXXXXTTVAHEIIDLDANDDPDGV 60
MAEGEGSSSRRWALGDPDVVEVSPE TTVAHEIIDLDANDDPDGV
Sbjct: 1 MAEGEGSSSRRWALGDPDVVEVSPEAAAAARWSSARLKRKRTTVAHEIIDLDANDDPDGV 60
Query: 61 MIICEKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPGTSTVLPWGCTTPGRPRKH 120
MIICEKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPGTSTVLPWGCTTPGRPRKH
Sbjct: 61 MIICEKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPGTSTVLPWGCTTPGRPRKH 120
Query: 121 KEIKTVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVL 180
KEIKTVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVL
Sbjct: 121 KEIKTVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVL 180
Query: 181 EKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGG 240
EKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGG
Sbjct: 181 EKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGG 240
Query: 241 LRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYA 300
LRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYA
Sbjct: 241 LRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYA 300
Query: 301 ASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAY 360
ASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAY
Sbjct: 301 ASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAY 360
Query: 361 MNGAQVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNP 420
MNGAQVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNP
Sbjct: 361 MNGAQVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNP 420
Query: 421 GSTRAKADTTLRL 433
GSTRAKADTTLRL
Sbjct: 421 GSTRAKADTTLRL 433
>Os05g0557600 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 509
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/345 (71%), Positives = 272/345 (78%), Gaps = 1/345 (0%)
Query: 90 LAEDVPGPSHQPGTSTVLPWGCTTPGR-PRKHKEIKTVDNKIDEKYKAFKQFDTVTDHSD 148
LA G PG LPW TT K K + +D+KIDEKY AFKQFDTV DHSD
Sbjct: 165 LASKFDGLDIPPGVEAPLPWLQTTAAEMANKTKPVNMMDDKIDEKYSAFKQFDTVDDHSD 224
Query: 149 HYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPA 208
HYYS V VKKPSK+W +RIQHEWKVLEKDLP TIFVR YEDRM+LLRAVI GPA
Sbjct: 225 HYYSKPDLRKVQVVKKPSKEWAKRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPA 284
Query: 209 GTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEK 268
GTPYHDGLFFFD+YFP YP PPLVNYRSGGLRLNPNLY GKVCLSLLNTWSG GCE+
Sbjct: 285 GTPYHDGLFFFDIYFPPHYPSVPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCER 344
Query: 269 WNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTML 328
W+PSNSTMLQVLVS+QALVLNAKPYFNEPGYA ANTP GEK S+ YNE TFLLSCRTML
Sbjct: 345 WSPSNSTMLQVLVSVQALVLNAKPYFNEPGYAMHANTPHGEKSSLTYNEDTFLLSCRTML 404
Query: 329 YSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDKSCSANF 388
YSLRNPPKHFEDF HF KYG++IL+ C+AY++GAQVGCL GNGVQDVDEGDKSCSA F
Sbjct: 405 YSLRNPPKHFEDFIAGHFRKYGQSILIACRAYLDGAQVGCLVGNGVQDVDEGDKSCSARF 464
Query: 389 KGSLKTLFDELIKEFTRIGVHCHEFQPQRVNPGSTRAKADTTLRL 433
K +LK LF+EL+ EFT G C +F ++ ++RA ADTTLRL
Sbjct: 465 KSALKRLFEELLMEFTVKGAECDKFLAEKAKAAASRAPADTTLRL 509
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 6 GSSSRRWALGDPDVVEVSPEXXXXXXXXXXXXXXXXTTVA-HEIIDLDANDDPDGVMIIC 64
GSSS DPDVVEV+P + V HE+I+LDA+DDPDGV+II
Sbjct: 13 GSSS----FDDPDVVEVTPAAAAAGGWSSGHQKRKRSQVVPHEVIELDADDDPDGVVIIG 68
Query: 65 EKASSHKSNHSVSHPSDWPKHPKSGLAEDVPGPSHQPGTSTVLPWGCTTPGRPRKHKEIK 124
EK+S K+ +V +P DW KH KS LA ++ GPS P + + G + +E
Sbjct: 69 EKSSVDKNKQAVGYPIDWLKHAKSSLAGEIAGPSSYPSKNPDILLGGL-----KIFQENP 123
Query: 125 TVDNKIDEKYKAF 137
+N D Y+AF
Sbjct: 124 FYNNIDDYAYEAF 136
>Os01g0677500
Length = 389
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/235 (73%), Positives = 194/235 (82%), Gaps = 1/235 (0%)
Query: 102 GTSTVLPWGCTTPGRPRKHKEIKTVDNKIDEKYKAFKQFDTVTDHSDHYYSMSGKGNVPE 161
G ++ G T+ +P +HK++K VD KIDEKY FKQFD V DHSDH+YS + V
Sbjct: 148 GEGGIVVEGQTSAEKPHQHKQMKHVDPKIDEKYVEFKQFDIVGDHSDHFYSNPRERKVQV 207
Query: 162 VKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDV 221
V +P KDWV+RIQHEWKVLEKDLP IFVRVYEDR+ELLRAVI+GP+GTPYHDGLFFFDV
Sbjct: 208 VNEPGKDWVKRIQHEWKVLEKDLPDNIFVRVYEDRLELLRAVIIGPSGTPYHDGLFFFDV 267
Query: 222 YFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLV 281
YFP QYP+ P LV Y SGG+RLNPNLY GKVCLSLLNTW G GCEKWNPSNST LQVLV
Sbjct: 268 YFPPQYPRNPLLVIYHSGGMRLNPNLYACGKVCLSLLNTWPGDGCEKWNPSNST-LQVLV 326
Query: 282 SIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPK 336
SIQALVLNAKPYFNEPG+ + ANTP+ EK S+AYN+ TFLLSC+TMLYSLRNPPK
Sbjct: 327 SIQALVLNAKPYFNEPGFESYANTPRAEKKSIAYNQETFLLSCKTMLYSLRNPPK 381
>Os01g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 485
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 223/352 (63%), Gaps = 37/352 (10%)
Query: 101 PGTSTVLPWGCTTPGRPRKHKEIKTVD----NKIDEKYKAFKQFDTVTDHSDHYYSMSGK 156
PG +PW + TV+ NK K + FKQFDTV + SDH+Y+ +
Sbjct: 118 PGVEATVPWLQKIITNEEQSSSKLTVEDESANKSANKSQLFKQFDTVKNFSDHHYAAT-S 176
Query: 157 GNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGL 216
G+V + +DWV+RIQH+WK+LEKDLP +I+VRV EDRM+LLRA I+GP GTPYHDGL
Sbjct: 177 GDVTK-----RDWVKRIQHDWKLLEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGL 231
Query: 217 FFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTM 276
FFFD+ F + YP PP V Y SGGLR+NPNLY++GKVCLSLL TW+G GCE WNPS STM
Sbjct: 232 FFFDIQFSNSYPANPPSVYYHSGGLRINPNLYNNGKVCLSLLGTWAGSGCETWNPSQSTM 291
Query: 277 LQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPK 336
LQVLVSIQAL+LN KPYFNEPGYA+ AN+ GE+++M YN++TFL SCRTMLYSLR PP+
Sbjct: 292 LQVLVSIQALILNEKPYFNEPGYASYANSVSGERIAMEYNDNTFLHSCRTMLYSLRRPPE 351
Query: 337 HFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNGVQDVDEGDK-------------- 382
HF D HF + G IL C+ YM G +VG + ++ + GD
Sbjct: 352 HFADLVTSHFRERGHTILAACRYYMEGHKVGSVVPE-EKEPEYGDAGASTSSASASAAAA 410
Query: 383 ------------SCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRVNPGS 422
S F +LKTLF+EL+ EF G +F ++V S
Sbjct: 411 ALKPRPDKVDSVSRRPTFNDNLKTLFEELLMEFNVKGADTAKFLAEKVKKSS 462
>Os01g0233900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 374
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/269 (62%), Positives = 202/269 (75%), Gaps = 8/269 (2%)
Query: 134 YKAFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVY 193
Y F QFD V D SDHYY+ + G K SKDWV+ IQ+EWK+L+KDLP +I+VR Y
Sbjct: 85 YNLFNQFDVVQDFSDHYYAKNSPG------KTSKDWVKTIQNEWKLLQKDLPESIYVRAY 138
Query: 194 EDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKV 253
EDR++LLRA IVGPAGTPYHDGLFFFDV FPS+YP+ PP V+Y SGGLRLNPNLY+SGKV
Sbjct: 139 EDRIDLLRAAIVGPAGTPYHDGLFFFDVRFPSEYPQSPPKVHYHSGGLRLNPNLYESGKV 198
Query: 254 CLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSM 313
CLSLLNTW G GCEKW S ST+LQVLVSIQ LVLN KPYFNEPG SANT GEK S+
Sbjct: 199 CLSLLNTWWGTGCEKWGKSKSTILQVLVSIQGLVLNDKPYFNEPGNKNSANTAPGEKYSL 258
Query: 314 AYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGNG 373
AYN++ FLLSCRTM+YSLR PPKHFE HF + R IL C AY++GA VG + G
Sbjct: 259 AYNQTAFLLSCRTMMYSLRKPPKHFESLVARHFHERERVILDACDAYISGAVVGSSSAKG 318
Query: 374 VQDVDEGDKSCSANFKGSLKTLFDELIKE 402
+ + ++S A+FK SL+ + EL+++
Sbjct: 319 TKHPRDNNRSF-ADFKKSLEK-YSELLRK 345
>Os05g0232500 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 467
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 220/355 (61%), Gaps = 32/355 (9%)
Query: 90 LAEDVPGPSHQPGTSTVLPW--GCTTPGRPRKHKEIKTVDNKIDEKYKAFKQFDTVTDHS 147
LA+ G PG +PW P K + +D I +KY+ FKQFD V + S
Sbjct: 108 LADKFDGLDLPPGVEATVPWLQKKDIADGPSTFKSMAELDADITKKYEFFKQFDVVENFS 167
Query: 148 DHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGP 207
DH+Y+ + P V K KDW +RIQ++WK+LEKDLP +I+VRV E+RM+LLRAVI+GP
Sbjct: 168 DHHYA-----DKP-VGKTGKDWTKRIQYDWKLLEKDLPASIYVRVSENRMDLLRAVIIGP 221
Query: 208 AGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCE 267
GTPYHDGLFFFD F S YP PP+V Y SGGLRLNPNLY GKVCLSLL TWSG GCE
Sbjct: 222 QGTPYHDGLFFFDAQFTSTYPSTPPVVYYHSGGLRLNPNLYACGKVCLSLLGTWSGSGCE 281
Query: 268 KWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASANTPQGEKMSMAYNESTFLLSCRTM 327
KWN ++STMLQVLVSIQALVLN PYFNEPGY AN+ G+K +M YN++TF SCRTM
Sbjct: 282 KWNSAHSTMLQVLVSIQALVLNENPYFNEPGYETYANSATGQKSAMDYNDTTFQYSCRTM 341
Query: 328 LYSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGAQVGCLAGN-GVQDVDEGD----- 381
LYSLR P+HF+ HF G IL CK YM G +VG + N +D + D
Sbjct: 342 LYSLRRSPQHFDALVAGHFRHRGHAILAACKYYMEGHKVGSVVPNEDEEDAKQQDDTDAG 401
Query: 382 ------------------KSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQPQRV 418
K +A+FK ++ LF+EL+ EF G +F +++
Sbjct: 402 GSGSSSGAKPQPEKPDLCKGRAASFKTNMAVLFEELLMEFNVKGADTKKFCDEKL 456
>Os01g0125900 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 1063
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 146/297 (49%), Positives = 193/297 (64%), Gaps = 14/297 (4%)
Query: 124 KTVDNKIDEK---YKAFKQFDTVTDHSDHYY---SMSGKGNVPEVKKPSKDWVRRIQHEW 177
K+VD + +K FK FD DH+Y G G + WV+++Q EW
Sbjct: 764 KSVDVDMADKPGDSDGFKHFDVQQCPPDHHYLENMAQGTG--------GRKWVKKVQQEW 815
Query: 178 KVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYR 237
+LEK+LP I+VRV+EDRM+L+RAVI+G +GTPY DGLFFFD + P ++P+ PP Y
Sbjct: 816 NILEKNLPDYIYVRVFEDRMDLIRAVIIGASGTPYQDGLFFFDFHLPPEFPQVPPSAYYH 875
Query: 238 SGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEP 297
SGGLR+NPNLY GKVCLSLLNTW+G G E W+PS+S++LQVLVS+Q LVLN KPYFNE
Sbjct: 876 SGGLRVNPNLYVDGKVCLSLLNTWTGRGNEVWDPSSSSILQVLVSLQGLVLNEKPYFNEA 935
Query: 298 GYAASANTPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGC 357
GY T +GEK ++ YNE+T+LLS ++MLY LR PP HFEDFA+ HF K G+ IL C
Sbjct: 936 GYEKQVGTVEGEKNALPYNENTYLLSLKSMLYILRRPPMHFEDFAKSHFSKRGKYILKAC 995
Query: 358 KAYMNGAQVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVHCHEFQ 414
+AY+ G VG L + ++ CS FK +L + LI G +C +++
Sbjct: 996 EAYLQGNGVGTLTDDACTTERSKEQPCSVGFKLALAKIMPRLITALKDAGANCDQYE 1052
>Os05g0153100
Length = 1045
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 180/290 (62%), Gaps = 16/290 (5%)
Query: 129 KIDEKYKAFKQFDTVTDHSDHYY---SMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKD-L 184
K+++ FD V DH++ + G + WV+R+Q EW++L D L
Sbjct: 743 KVEDDSLGVAHFDVVQCPPDHHFLDCKLEGAAH-------GNKWVKRVQKEWQILGNDNL 795
Query: 185 PGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKKPPLVNYRSGGLRLN 244
PGTI+VR +EDRM+LLRA +VG AG+PYHDGLF FD++ P+ YP PP V Y S GLR+N
Sbjct: 796 PGTIYVRAFEDRMDLLRAAMVGAAGSPYHDGLFLFDLHLPATYPAAPPEVYYHSFGLRVN 855
Query: 245 PNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNAKPYFNEPGYAASAN 304
PNLY SG VCLSLLNT+ G G E W+P+ ST+LQVLVSIQ LVL A PY+NE GY A A
Sbjct: 856 PNLYPSGTVCLSLLNTFDGEGVEVWSPARSTLLQVLVSIQGLVLTADPYYNEAGYDAYAG 915
Query: 305 TPQGEKMSMAYNESTFLLSCRTMLYSLRNPPKHFEDFARVHFCKYGRNILVGCKAYMNGA 364
TP G + + +Y E+ LL+ R+ L+ LR PP+ FE HF + G ++L C++Y+ G
Sbjct: 916 TPGGRRNAASYAENACLLTLRSALHLLRRPPRGFEGVVGAHFRRRGAHVLAACESYLRGT 975
Query: 365 QVGCLAGNGVQDVDEGDKSCSANFKGSLKTLFDELIKEFTRIGVH-CHEF 413
+V D G+++CSA F+ +L+ + L F IGV C F
Sbjct: 976 RVAGDG----GDGGGGERTCSAGFRLALRNVVPVLAAAFAEIGVEGCERF 1021
>Os01g0229900 Similar to Shaggy-related protein kinase dzeta (EC 2.7.1.-)
(ASK-dzeta)
Length = 258
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 81/111 (72%), Gaps = 15/111 (13%)
Query: 136 AFKQFDTVTDHSDHYYSMSGKGNVPEVKKPSKDWVRRIQHEWKVLEKDLPGTIFVRVYED 195
+F FD V D SDHYY+ + G K SKDWV+ IQ+EW++L+KDLP +I+VRVYED
Sbjct: 135 SFSHFD-VQDFSDHYYAKNSPG------KTSKDWVKTIQNEWRLLQKDLPESIYVRVYED 187
Query: 196 RMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK--------PPLVNYRS 238
R++LLRA IVGPA TPYHDGLFFFDV+FPS+YP+ P L++Y S
Sbjct: 188 RIDLLRAAIVGPAETPYHDGLFFFDVHFPSEYPQSHRLTHVHIPSLMSYES 238
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+RIQ E L KD P + + + +A I+GP+ +PY G+FF +++FP YP K
Sbjct: 4 KRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFK 63
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP VN+++ +PN+ +G +CL +L E+W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVNFQTK--VYHPNINSNGSICLDILK-------EQWSPA-LTISKVLLSISSLLTDP 113
Query: 291 K---PYFNEPGYAASANTPQGEKMSMAYNE 317
P E + + P+ E+ + A+ +
Sbjct: 114 NPDDPLVPEIAHVYKSQRPRYEETARAWTQ 143
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+RIQ E K L+KD P + + M +A I+GP+ +PY G+F ++FP YP K
Sbjct: 4 KRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V +R+ +PN+ +G +CL +L ++W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVAFRTK--VFHPNINSNGSICLDILK-------DQWSPA-LTISKVLLSICSLLTDP 113
Query: 291 KP 292
P
Sbjct: 114 NP 115
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+RI E K L+KD P + + M +A I+GP+ +P+ G+F +++FP YP K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFK 63
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V++R+ +PN+ +G +CL +L E+W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVSFRTK--VFHPNINSNGSICLDILK-------EQWSPA-LTISKVLLSICSLLTDP 113
Query: 291 KP 292
P
Sbjct: 114 NP 115
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 170 VRRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPK 229
+RRI E K L++D P + D M +A I+GP +PY G+F ++FP YP
Sbjct: 3 LRRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPF 62
Query: 230 KPPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLN 289
KPP V +++ +PN+ +G +CL +L ++W+P+ T+ +VL+SI +L+ +
Sbjct: 63 KPPKVAFKTK--VFHPNINSNGNICLDILK-------DQWSPA-LTISKVLLSICSLLTD 112
Query: 290 AKP 292
P
Sbjct: 113 PNP 115
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+RI E K L+KD P + + M +A I+GP +PY G+F +++FP YP K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFK 63
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V++++ +PN+ +G +CL +L E+W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVSFKTK--VFHPNINSNGSICLDILK-------EQWSPA-LTISKVLLSICSLLTDP 113
Query: 291 KP 292
P
Sbjct: 114 NP 115
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+R+ ++K L++D P I +++ + L AVI GP TP+ G F + F YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP+V + S +PN+Y G +CL +L +W+P + +L SIQ+L+ +
Sbjct: 67 PPVVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 291 KPYFNEPGYAASA 303
P N P + +A
Sbjct: 117 NP--NSPANSEAA 127
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+RI E K L+KD P + + M +A ++GP+ +PY G+F ++FP YP K
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V ++ +PN+ +G +CL +L E+W+P+ T+ +VL+SI +L+ +
Sbjct: 64 PPKVALKTK--VFHPNINSNGSICLDILK-------EQWSPA-LTISKVLLSICSLLTDP 113
Query: 291 KP 292
P
Sbjct: 114 NP 115
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+R+ ++K L++D P I +++ + L AVI GP TP+ G F + F YP K
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V + S +PN+Y G +CL +L +W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 291 KPYFNEPGYAASA 303
P N P + +A
Sbjct: 117 NP--NSPANSEAA 127
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 171 RRIQHEWKVLEKDLPGTIFVRVYEDRMELLRAVIVGPAGTPYHDGLFFFDVYFPSQYPKK 230
+R+ ++K L +D P I ++ + L AVI GP TP+ G F + F YP K
Sbjct: 7 KRLMRDFKRLMQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 231 PPLVNYRSGGLRLNPNLYDSGKVCLSLLNTWSGHGCEKWNPSNSTMLQVLVSIQALVLNA 290
PP V + S +PN+Y G +CL +L +W+P + +L SIQ+L+ +
Sbjct: 67 PPTVRFVSR--MFHPNIYADGSICLDILQN-------QWSPIYD-VAAILTSIQSLLCDP 116
Query: 291 KPYFNEPGYAASA 303
P N P + +A
Sbjct: 117 NP--NSPANSEAA 127
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,658,983
Number of extensions: 738592
Number of successful extensions: 1761
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 1750
Number of HSP's successfully gapped: 21
Length of query: 433
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 329
Effective length of database: 11,605,545
Effective search space: 3818224305
Effective search space used: 3818224305
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)