BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0254600 Os09g0254600|Os09g0254600
(206 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0254600 MtN3 and saliva related transmembrane protein ... 338 2e-93
Os12g0178500 266 8e-72
Os09g0254050 257 5e-69
Os01g0606000 MtN3 and saliva related transmembrane protein ... 172 1e-43
Os01g0605700 MtN3 and saliva related transmembrane protein ... 171 4e-43
Os09g0259650 156 9e-39
Os05g0588500 MtN3 and saliva related transmembrane protein ... 150 5e-37
Os02g0301100 MtN3 and saliva related transmembrane protein ... 149 2e-36
Os09g0258700 MtN3 and saliva related transmembrane protein ... 103 9e-23
Os05g0426000 MtN3 and saliva related transmembrane protein ... 96 2e-20
Os01g0881300 MtN3 and saliva related transmembrane protein ... 91 7e-19
Os03g0341300 MtN3 and saliva related transmembrane protein ... 89 2e-18
Os01g0314600 84 6e-17
Os05g0214300 MtN3 and saliva related transmembrane protein ... 80 7e-16
Os01g0541800 MtN3 and saliva related transmembrane protein ... 80 9e-16
Os03g0347500 Similar to Senescence-associated protein (SAG29) 76 2e-14
Os11g0508600 Similar to MtN3 protein precursor 75 3e-14
Os02g0513100 Similar to MtN3 protein precursor 71 5e-13
Os01g0700100 MtN3 and saliva related transmembrane protein ... 68 4e-12
Os08g0535200 Similar to MtN3-like protein 68 4e-12
>Os09g0254600 MtN3 and saliva related transmembrane protein family protein
Length = 206
Score = 338 bits (866), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/206 (83%), Positives = 172/206 (83%)
Query: 1 MVSPDMIRXXXXXXXXXXSFGLFLSPVPTFWQIIXXXXXXXXXMEXXXXXXXXXXXXXXX 60
MVSPDMIR SFGLFLSPVPTFWQII ME
Sbjct: 1 MVSPDMIRNVVGIVGNVISFGLFLSPVPTFWQIIKNKNKNKKKMEVVLAAEALFMAAVAL 60
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL
Sbjct: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
Query: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTS 180
YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTS
Sbjct: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTS 180
Query: 181 VGPISKDNDLNGSTASHVTIDITIQP 206
VGPISKDNDLNGSTASHVTIDITIQP
Sbjct: 181 VGPISKDNDLNGSTASHVTIDITIQP 206
>Os12g0178500
Length = 240
Score = 266 bits (680), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 157/242 (64%), Gaps = 38/242 (15%)
Query: 1 MVSPDMIRXXXXXXXXXXSFGLFLSPVPTFWQIIXXXXXX-------------------- 40
MVSPD+IR SFGLFLSPVP FW+II
Sbjct: 1 MVSPDLIRNVVGIVGNVISFGLFLSPVPIFWRIIKNKNVQNFKADPILVVTINGISLVIE 60
Query: 41 ---------------XXXMEXXXXXXXXXXXXXXXGVLLGVHTHQRRSLIVGILCVIFDT 85
M GVLLG HTHQRRSLIVGILCVIF T
Sbjct: 61 AVYLTIFFLFSDKKNKKKMGVVLATEALFMAAVAVGVLLGAHTHQRRSLIVGILCVIFGT 120
Query: 86 IMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIRFDIFITIPNGLGVLFA 145
IMYSSPLT+M VVKTKSVEYMPLLLSVVSFLNGL WT Y LIRFDIFITIPNGLGVLFA
Sbjct: 121 IMYSSPLTIM--VVKTKSVEYMPLLLSVVSFLNGLCWTLYALIRFDIFITIPNGLGVLFA 178
Query: 146 AVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTS-VGPISKDNDLNGSTASHVTIDITI 204
+QLILY IYYRTTPKKQ+KNLELPTV P+AKDTS V P+S D+D+NGSTASH TI+ITI
Sbjct: 179 IMQLILYAIYYRTTPKKQDKNLELPTVAPIAKDTSIVAPVSNDDDVNGSTASHATINITI 238
Query: 205 QP 206
+P
Sbjct: 239 EP 240
>Os09g0254050
Length = 164
Score = 257 bits (656), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 125/147 (85%), Positives = 135/147 (91%), Gaps = 1/147 (0%)
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
GVLLG HTHQRRSL+VGILCVIF TIMYSSPLT+MSQVVKTKSVEYMPLLLSVVSFLNG+
Sbjct: 18 GVLLGAHTHQRRSLVVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSVVSFLNGI 77
Query: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTS 180
W SY LIRFDIFITIPNGLGVLFA +QLILY IYYRT PKKQ+KNLELPTV PVAKDT+
Sbjct: 78 CWMSYALIRFDIFITIPNGLGVLFALIQLILYAIYYRTIPKKQDKNLELPTVAPVAKDTN 137
Query: 181 -VGPISKDNDLNGSTASHVTIDITIQP 206
V PISKD+D+NGSTASHVTI+ TI+P
Sbjct: 138 IVAPISKDDDVNGSTASHVTINTTIEP 164
>Os01g0606000 MtN3 and saliva related transmembrane protein family protein
Length = 259
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 96/114 (84%), Gaps = 2/114 (1%)
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
GVLLG HTH++RS+IVGILCV F +IMY SPLT+M +V+KTKSVEYMP LS+V FLNG+
Sbjct: 119 GVLLGAHTHEKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGV 178
Query: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQN--KNLELPTV 172
WT+Y LIRFDI++TIPNGLG LF A+QLILY YYRTTPKK K++E+P+V
Sbjct: 179 CWTAYALIRFDIYVTIPNGLGALFGAIQLILYACYYRTTPKKTKAAKDVEMPSV 232
>Os01g0605700 MtN3 and saliva related transmembrane protein family protein
Length = 254
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 100/126 (79%), Gaps = 4/126 (3%)
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
GVLL HTH++RS+IVGILCV F +IMY SPLT+M +V+KTKSVEYMP LS+V FLNG+
Sbjct: 119 GVLLSAHTHKKRSMIVGILCVFFGSIMYFSPLTIMGKVIKTKSVEYMPFFLSLVCFLNGV 178
Query: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQN--KNLELPTV--TPVA 176
WT+Y LIRFDI++TIPNGLG +F A+QLILY YYRTTPKK K++E+P+V P A
Sbjct: 179 CWTAYALIRFDIYVTIPNGLGAIFGAIQLILYACYYRTTPKKTKAAKDVEMPSVISGPGA 238
Query: 177 KDTSVG 182
T+ G
Sbjct: 239 AATASG 244
>Os09g0259650
Length = 103
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/113 (74%), Positives = 92/113 (81%), Gaps = 11/113 (9%)
Query: 95 MSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVI 154
MSQVVKTKSVEYMPLLLSVVSFLNGL WTSY LIRFDIFITIPNGL A I
Sbjct: 1 MSQVVKTKSVEYMPLLLSVVSFLNGLCWTSYALIRFDIFITIPNGLDHTQEA-------I 53
Query: 155 YYRTTPKKQNKNLELPTVTPVAKDTS-VGPISKDNDLNGSTASHVTIDITIQP 206
YYRTTPKKQ+KNL+LPTV PVAK TS V P+SKD+D+NG SHVTI+IT++P
Sbjct: 54 YYRTTPKKQDKNLKLPTVAPVAKGTSIVAPVSKDDDING---SHVTINITVEP 103
>Os05g0588500 MtN3 and saliva related transmembrane protein family protein
Length = 237
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 82/110 (74%)
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGL 120
GVLLG HT+ +RSLIVG LCV F T+MY++PLT+M QV+ TKSVEYMP LS+VSF+NG+
Sbjct: 120 GVLLGAHTYDKRSLIVGTLCVFFGTLMYAAPLTIMKQVIATKSVEYMPFTLSLVSFINGI 179
Query: 121 YWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELP 170
WT Y IRFDI ITIPNG+G L A QLILY YY + K LELP
Sbjct: 180 CWTIYAFIRFDILITIPNGMGTLLGAAQLILYFCYYDGSTAKNKGALELP 229
>Os02g0301100 MtN3 and saliva related transmembrane protein family protein
Length = 259
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 97/130 (74%), Gaps = 9/130 (6%)
Query: 67 HTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYT 126
HTH+RRS+IVGILCV+F T MY++PL+VM V++TKSVEYMPL LS+ S +NG+ WT+Y
Sbjct: 125 HTHERRSMIVGILCVLFGTGMYAAPLSVMKMVIQTKSVEYMPLFLSLASLVNGICWTAYA 184
Query: 127 LIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPK----KQNKNLELPTVTPVAKDTSVG 182
LIRFD++ITIPNGLGV+FA QLILY IYY++T + ++ K + +T V D+
Sbjct: 185 LIRFDLYITIPNGLGVMFAVAQLILYAIYYKSTQQIIEARKRKEADHVAMTDVVVDS--- 241
Query: 183 PISKDNDLNG 192
+K+N +G
Sbjct: 242 --AKNNPSSG 249
>Os09g0258700 MtN3 and saliva related transmembrane protein family protein
Length = 375
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Query: 61 GVLLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSV 113
GVLLG HTHQRRSLIVGILCVIF TIMYSSPLT+MSQVVKTKSVEYMPLLLSV
Sbjct: 119 GVLLGAHTHQRRSLIVGILCVIFGTIMYSSPLTIMSQVVKTKSVEYMPLLLSV 171
>Os05g0426000 MtN3 and saliva related transmembrane protein family protein
Length = 261
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 63 LLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYW 122
LL +H Q R L+ G+ + MY+SPL++M V+KTKSVEYMP L+S+ FL G W
Sbjct: 120 LLALH-GQHRKLLCGVAATVCSICMYASPLSIMRLVIKTKSVEYMPFLMSLAVFLCGTSW 178
Query: 123 TSYTLIRFDIFITIPNGLGVLFAAVQLILYVIY 155
Y L+ D F+TIPNG G AVQL+LY IY
Sbjct: 179 FIYGLLGRDPFVTIPNGCGSFLGAVQLVLYAIY 211
>Os01g0881300 MtN3 and saliva related transmembrane protein family protein
Length = 273
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 63 LLGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYW 122
LL +H Q R L G+ IF MY+SPL++M V+KTKSVE+MP LLS+ FL G W
Sbjct: 119 LLALH-GQGRKLFCGLAATIFSICMYASPLSIMRLVIKTKSVEFMPFLLSLSVFLCGTSW 177
Query: 123 TSYTLIRFDIFITIPNGLGVLFAAVQLILYVIY 155
Y L+ D FI IPNG G +QLILY IY
Sbjct: 178 FIYGLLGRDPFIAIPNGCGSFLGLMQLILYAIY 210
>Os03g0341300 MtN3 and saliva related transmembrane protein family protein
Length = 328
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 53/87 (60%)
Query: 72 RSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIRFD 131
R +VG+LC MY++P+ M VVKT+SVEYMP LS FLNG W+ Y+L+ D
Sbjct: 125 RLFVVGVLCAALTIGMYAAPMAAMRTVVKTRSVEYMPFSLSFFLFLNGGVWSVYSLLVKD 184
Query: 132 IFITIPNGLGVLFAAVQLILYVIYYRT 158
FI IPN +G QL LY+ Y RT
Sbjct: 185 YFIGIPNAIGFALGTAQLALYMAYRRT 211
>Os01g0314600
Length = 154
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 61 GVLLGVHTH-----QRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVS 115
G +L V T Q R ++GI+C F+ +MY+SPLT + V++ ++V+ MP LS
Sbjct: 19 GAVLAVATFAISQLQLRIRVIGIICACFNVLMYASPLTAVINVIQHENVDAMPFWLSFFL 78
Query: 116 FLNGLYWTSYTLIRFDIFITIPNGLGVLFAAVQLILYVIY 155
FLNG W Y +I D+ I IPNG+G L +QLI+Y IY
Sbjct: 79 FLNGGVWLVYGIIDRDMLIGIPNGIGFLLGTIQLIVYAIY 118
>Os05g0214300 MtN3 and saliva related transmembrane protein family protein
Length = 211
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 64 LGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWT 123
+H H R + VG + ++ MY SPL M QV++TKSVE+MP LS+ + L W
Sbjct: 87 FSIHNHHIRKVFVGSVGLVSSISMYGSPLVAMKQVIRTKSVEFMPFYLSLFTLFTSLTWM 146
Query: 124 SYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRT--TPK-----KQNKNLELPT 171
+Y +I D FI PN +G + +QL++Y IY + PK +Q +++PT
Sbjct: 147 AYGVIGRDPFIATPNCIGSIMGILQLVVYCIYSKCKEAPKVLHDIEQANVVKIPT 201
>Os01g0541800 MtN3 and saliva related transmembrane protein family protein
Length = 243
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 64 LGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWT 123
L + HQ R L VG L V M++SPL++++ V++TKSVEYMP LS+ FL + +
Sbjct: 136 LALFDHQTRQLFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFYLSLSMFLMSVSFF 195
Query: 124 SYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQN 164
+Y ++ D FI IPNG+G + +QL+LY Y+R ++ +
Sbjct: 196 AYGVLLHDFFIYIPNGIGTVLGVIQLVLYG-YFRKGSREDS 235
>Os03g0347500 Similar to Senescence-associated protein (SAG29)
Length = 300
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 64 LGVHTHQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWT 123
L V RR + G + F ++ +PLT++ QV++TKSVE+MP LS L+ + W
Sbjct: 118 LLVKATDRRVTLAGGIGASFALAVFVAPLTIIRQVIRTKSVEFMPFWLSFFLTLSAVVWF 177
Query: 124 SYTLIRFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLE 168
Y L+ D F+ PN LG+LF Q++LYV+Y PKK + E
Sbjct: 178 FYGLLMKDFFVATPNVLGLLFGLAQMVLYVVY--KNPKKNSAVSE 220
>Os11g0508600 Similar to MtN3 protein precursor
Length = 303
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 70 QRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIR 129
RR +++G +CV F ++ +PL+++ VV+TKSVE+MP LS ++ + W Y L+
Sbjct: 129 DRRIVVLGWVCVGFSVSVFVAPLSIIRLVVRTKSVEFMPFSLSFSLTISAVVWFLYGLLI 188
Query: 130 FDIFITIPNGLGVLFAAVQLILYVIYYRTTPKK-QNKNLELPTVTPVAKDTSVG 182
D ++ +PN LG F +Q+ LY +Y +TPK K +E T T ++ G
Sbjct: 189 KDKYVALPNVLGFSFGVIQMGLYAMYRNSTPKAVLTKEVEAATATGDDDHSAAG 242
>Os02g0513100 Similar to MtN3 protein precursor
Length = 319
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 70 QRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIR 129
+ R ++G +CV ++++PL+++ V++TKSVE+MP LS L+ + W Y L++
Sbjct: 130 ELRVHVLGWICVAVSLSVFAAPLSIIRLVIRTKSVEFMPFSLSFFLVLSAVIWFLYGLLK 189
Query: 130 FDIFITIPNGLGVLFAAVQLILYVIYYRTTP 160
D+F+ +PN LG +F Q+ LY+ Y P
Sbjct: 190 KDVFVALPNVLGFVFGVAQMALYMAYRSKKP 220
>Os01g0700100 MtN3 and saliva related transmembrane protein family protein
Length = 230
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 87 MYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLIRFDIFITIPNGLGVLFAA 146
M++SPL VM V++++SVE+MP LS+ +FL + Y L+ D FI PNGLG++ A
Sbjct: 146 MFASPLAVMGVVIRSESVEFMPFYLSLSTFLMSASFALYGLLLRDFFIYFPNGLGLILGA 205
Query: 147 VQLILYVIYYRTTPKKQNKN 166
+QL LY YY + Q+ +
Sbjct: 206 MQLALYA-YYSRKWRGQDSS 224
>Os08g0535200 Similar to MtN3-like protein
Length = 307
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 69 HQRRSLIVGILCVIFDTIMYSSPLTVMSQVVKTKSVEYMPLLLSVVSFLNGLYWTSYTLI 128
HQ + L G +C+ F ++ +PL+++ +V+KTKSVE+MP+ LSV L+ + W Y L
Sbjct: 132 HQVKFL--GSVCLAFSMAVFVAPLSIIFKVIKTKSVEFMPIGLSVCLTLSAVAWFCYGLF 189
Query: 129 RFDIFITIPNGLGVLFAAVQLILYVIYYRTTPKKQNKNLELPTVTPVAKDTSVGPISKDN 188
D ++ PN G F+ VQ+ LY Y +K LPT + S +
Sbjct: 190 TKDPYVMYPNVGGFFFSCVQMGLYFWY-----RKPRNTAVLPTTSDSMSPISAAAAATQR 244
Query: 189 DLNGSTASHVTIDITIQP 206
+ +H +++ P
Sbjct: 245 VIELPAGTHAFTILSVSP 262
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,220,363
Number of extensions: 169918
Number of successful extensions: 606
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 598
Number of HSP's successfully gapped: 20
Length of query: 206
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 110
Effective length of database: 12,023,257
Effective search space: 1322558270
Effective search space used: 1322558270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)