Os09g0254600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MtN3 and saliva related transmembrane protein family protein.
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Os09g0254600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MtN3 and saliva related transmembrane protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.43 | 0.513 | 3.46 | -1.4 | 0.236 | 4.33 | -0.422 | -20.1 | 0.0265 | 9.61 | 998.8 | 336 | -- | -- |
| 123.2 | 0.521 | 3.29 | -0.464 | 0.24 | 0.722 | -0.411 | -- | 0.025 | 9.59 | 998.8 | 336 | -- | -- |
| 120.08 | 0.51 | 3.46 | -1.41 | 0.237 | 4.3 | -- | -19.9 | 0.026 | 9.84 | 998.8 | 335 | -- | -- |
| 121.34 | 0.513 | 3.29 | -0.48 | 0.235 | 0.91 | -- | -- | 0.0255 | 9.5 | 998.2 | 253 | -- | -- |
| 123.26 | 0.517 | 3.43 | -1.22 | -- | 4.04 | -- | -18.2 | 0.0269 | -- | 998.3 | 206 | -- | -- |
| 133.74 | 0.542 | 3.3 | -0.373 | 0.244 | -- | -0.412 | -- | -0.00958 | 9.5 | -- | -- | -- | -- |
| 134.36 | 0.543 | 3.3 | -0.388 | 0.245 | -- | -- | -- | -0.00996 | 9.62 | -- | -- | -- | -- |
| 124.57 | 0.52 | 3.3 | -0.482 | -- | 0.92 | -- | -- | 0.0275 | -- | 998.2 | 235 | -- | -- |
| 127.4 | 0.526 | 3.29 | -- | 0.253 | 0.839 | -- | -- | 0.0631 | 9.64 | 998.2 | 295 | -- | -- |
| 137.91 | 0.549 | 3.31 | -0.39 | -- | -- | -- | -- | -0.00947 | -- | -- | -- | -- | -- |
| 138.32 | 0.55 | 3.29 | -- | 0.246 | -- | -- | -- | 0.0332 | 9.74 | -- | -- | -- | -- |
| 130.61 | 0.532 | 3.29 | -- | -- | 0.836 | -- | -- | 0.0759 | -- | 998.2 | 235 | -- | -- |
| 141.92 | 0.556 | 3.3 | -- | -- | -- | -- | -- | 0.0338 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.42 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 19 |
| 23 | 118.52 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 16 | 20 |
| 37 | 118.93 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 39 | 118.95 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 44 | 119.01 | atmosphere | 1000 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 46 | 119.02 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 64 | 119.06 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 83 | 119.12 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 88 | 119.13 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 91 | 119.14 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 117 | 119.22 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 145 | 119.32 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 152 | 119.41 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 173 | 119.46 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 189 | 119.51 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 248 | 119.58 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 16 |
| 253 | 119.59 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 272 | 119.63 | temperature | 30 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 285 | 119.65 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 11 |
| 306 | 119.70 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 385 | 119.84 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 20 |
| 395 | 119.86 | temperature | 30 | 4320 | > th | dose dependent | sin | 9 | NA |
| 465 | 120.06 | temperature | 30 | 4320 | > th | dose independent | sin | 9 | NA |
| 472 | 120.07 | atmosphere | 1000 | 720 | < th | dose dependent | sin | 9 | NA |
| 494 | 120.16 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 12 |
| 499 | 120.17 | temperature | 30 | 4320 | < th | dose independent | sin | 9 | NA |
| 605 | 120.41 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 685 | 120.57 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 17 |
| 730 | 120.69 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 735 | 120.70 | atmosphere | 1000 | 720 | < th | dose independent | sin | 9 | NA |
| 762 | 120.73 | temperature | 30 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 835 | 120.89 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 989 | 121.16 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |