Os05g0214300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MtN3 and saliva related transmembrane protein family protein.
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Os05g0214300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MtN3 and saliva related transmembrane protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 623.43 | 1.17 | 7.7 | -3.74 | 1.5 | 5.78 | 1.51 | -13.1 | -0.463 | 9.42 | 26.9 | 7046 | -- | -- |
| 775.97 | 1.3 | 7.47 | -3.68 | 1.1 | 7.09 | 1.81 | -- | -0.357 | 10 | 20.56 | 16966 | -- | -- |
| 629.1 | 1.17 | 7.72 | -3.71 | 1.45 | 5.85 | -- | -13.2 | -0.537 | 9.22 | 26.87 | 7204 | -- | -- |
| 765.74 | 1.29 | 7.44 | -3.94 | 1.49 | 7.62 | -- | -- | -0.309 | 9.29 | 20.5 | 18014 | -- | -- |
| 749.49 | 1.28 | 7.76 | -3.71 | -- | 5.81 | -- | -13.3 | -0.538 | -- | 26.86 | 7214 | -- | -- |
| 1676.86 | 1.92 | 6.79 | 2.82 | 1.39 | -- | 1.61 | -- | 2.41 | 8.61 | -- | -- | -- | -- |
| 1685.1 | 1.92 | 6.79 | 2.88 | 1.39 | -- | -- | -- | 2.41 | 8.78 | -- | -- | -- | -- |
| 886.05 | 1.39 | 7.47 | -4.2 | -- | 7.73 | -- | -- | -0.429 | -- | 20.5 | 17534 | -- | -- |
| 725.24 | 1.25 | 7.33 | -- | 1.55 | 5.36 | -- | -- | 0.0487 | 9.63 | 23.25 | 9287 | -- | -- |
| 1794.26 | 1.98 | 6.82 | 2.88 | -- | -- | -- | -- | 2.42 | -- | -- | -- | -- | -- |
| 1903.05 | 2.04 | 6.86 | -- | 1.39 | -- | -- | -- | 2.09 | 8.63 | -- | -- | -- | -- |
| 843.32 | 1.35 | 7.35 | -- | -- | 5.33 | -- | -- | 0.108 | -- | 23.28 | 8639 | -- | -- |
| 2012.64 | 2.09 | 6.9 | -- | -- | -- | -- | -- | 2.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 649.81 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 4 | 657.02 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 7 | 659.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 9 | 660.00 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 12 | 661.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 14 | 662.53 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 29 | 671.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 40 | 673.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 46 | 675.49 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 71 | 680.39 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 79 | 681.30 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 81 | 681.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 87 | 682.69 | wind | 7 | 43200 | < th | dose independent | sin | 23 | NA |
| 88 | 682.94 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 91 | 683.18 | wind | 7 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 94 | 683.36 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 105 | 684.05 | wind | 7 | 43200 | > th | dose independent | sin | 23 | NA |
| 107 | 684.13 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 11 |
| 115 | 684.62 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 124 | 685.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 125 | 685.23 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 8 |
| 137 | 685.95 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 148 | 686.07 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 150 | 686.23 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 172 | 687.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 182 | 688.02 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 13 |
| 228 | 689.91 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 246 | 690.35 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 305 | 692.30 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 338 | 693.07 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 380 | 694.09 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 404 | 694.56 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 421 | 695.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 463 | 696.15 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 470 | 696.37 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 477 | 696.58 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 509 | 697.36 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 532 | 698.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 542 | 698.49 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 546 | 698.56 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 568 | 699.37 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 17 |
| 594 | 700.32 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 601 | 700.69 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 608 | 700.83 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 631 | 701.25 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 642 | 701.55 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 656 | 701.97 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 671 | 702.42 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 704 | 703.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 706 | 703.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 17 |
| 777 | 705.21 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 877 | 707.81 | wind | 7 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 879 | 707.85 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 12 |
| 917 | 709.26 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 943 | 710.10 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 960 | 710.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 995 | 711.43 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 997 | 711.49 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 4 |