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Os01g0881300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MtN3 and saliva related transmembrane protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.03) R2 : 0.544
β1 : -0.872 (0.11) R2dD : 0.0659 R2D : 0.00609
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.92 (0.0848) R2dE : 0.527 R2E : 0.433
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.458 (0.0649) R2dN8 : 0.0674 R2N8 : -0.0279
σ : 0.56
deviance : 144.32
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_____
C
peak time of C : --
E
wheather : radiation
threshold : 1.09
memory length : 1105
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 9.31
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
139 0.554 13.3 -0.854 2.09 2.04 1.78 -0.881 -0.351 3.89 0.62 368 8.47 --
139.03 0.549 13.3 -0.78 2.18 2.14 2.16 -- -0.365 4.11 0.5801 375 8.9 --
146.09 0.563 13.3 -0.923 2.22 2.21 -- -1.66 -0.35 4.2 1.159 395 8.88 --
152.47 0.575 13.3 -0.775 2.15 2.02 -- -- -0.344 3.92 0.84 383 8.74 --
146.67 0.564 13.4 -1.01 -- 1.85 -- -0.2 -0.464 -- 0.9803 1088 8.82 --
195.91 0.656 13.3 -0.672 1.32 -- 0.698 -- -0.205 1.45 -- -- -- --
197.74 0.659 13.3 -0.694 1.32 -- -- -- -0.208 1.31 -- -- -- --
144.32 0.56 13.4 -0.872 -- 1.92 -- -- -0.458 -- 1.09 1105 9.31 --
168 0.604 13.3 -- 2.12 1.95 -- -- -0.281 3.95 1.46 401 8.7 --
304.73 0.816 13.3 -0.643 -- -- -- -- -0.181 -- -- -- -- --
210.44 0.679 13.3 -- 1.3 -- -- -- -0.131 1.29 -- -- -- --
161.37 0.592 13.4 -- -- 1.9 -- -- -0.406 -- 2.14 1131 9.33 --
315.63 0.829 13.3 -- -- -- -- -- -0.11 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 131.35 temperature 10.0 270 > th dose dependent rect. 7 7
4 133.74 precipitation 0.1 270 < th dose independent rect. 1 8
5 133.74 precipitation 0.1 270 < th dose dependent rect. 1 8
6 133.79 temperature 15.0 270 > th dose independent rect. 21 16
7 134.05 precipitation 0.1 270 < th dose independent rect. 14 17
8 134.05 precipitation 0.1 270 < th dose dependent rect. 14 17
9 134.24 temperature 20.0 270 > th dose independent rect. 7 7
13 134.58 temperature 10.0 10 > th dose dependent rect. 9 7
15 134.69 temperature 15.0 270 > th dose independent rect. 9 16
16 134.82 temperature 15.0 270 > th dose independent rect. 20 18
19 135.11 precipitation 0.1 270 < th dose independent rect. 13 8
20 135.11 precipitation 0.1 270 < th dose dependent rect. 13 8
21 135.14 wind 1.0 270 > th dose independent rect. 13 8
22 135.37 radiation 30.0 270 < th dose independent rect. 1 8
30 135.99 precipitation 0.1 270 < th dose independent rect. 14 6
31 135.99 precipitation 0.1 270 < th dose dependent rect. 14 6
33 136.16 wind 7.0 270 < th dose independent rect. 1 8
34 136.21 temperature 30.0 270 < th dose independent rect. 1 8
38 136.54 wind 9.0 270 < th dose independent rect. 9 16
39 136.62 wind 9.0 270 < th dose independent rect. 21 16
40 136.75 humidity 60.0 270 > th dose independent rect. 1 8
43 136.87 wind 1.0 270 > th dose independent rect. 14 6
49 137.00 radiation 1.0 270 > th dose independent rect. 8 6
50 137.01 temperature 10.0 270 > th dose independent rect. 1 8
53 137.01 atmosphere 995.0 270 > th dose independent rect. 1 8
54 137.01 atmosphere 1015.0 270 < th dose independent rect. 1 8
56 137.16 humidity 90.0 270 < th dose independent rect. 8 6
60 137.28 temperature 10.0 270 > th dose independent rect. 13 8
62 137.28 atmosphere 995.0 270 > th dose independent rect. 21 16
71 137.57 wind 9.0 270 < th dose independent rect. 20 18
72 137.66 atmosphere 1015.0 270 < th dose independent rect. 13 8
73 137.72 wind 9.0 270 < th dose independent rect. 13 8
76 137.90 wind 7.0 270 < th dose independent rect. 8 6
85 138.21 temperature 10.0 270 > th dose independent rect. 14 6
86 138.21 atmosphere 1015.0 270 < th dose independent rect. 14 6
88 138.21 atmosphere 995.0 270 > th dose independent rect. 20 18
89 138.29 wind 9.0 270 < th dose independent rect. 14 6
91 138.39 temperature 10.0 270 > th dose dependent rect. 14 6
98 138.65 precipitation 0.1 270 < th dose independent rect. 7 7
99 138.65 precipitation 0.1 270 < th dose dependent rect. 7 7
106 138.89 radiation 40.0 90 < th dose independent rect. 3 8
110 139.03 atmosphere 995.0 270 > th dose independent rect. 7 7
111 139.03 atmosphere 1015.0 270 < th dose independent rect. 7 7
112 139.03 temperature 10.0 270 > th dose independent rect. 14 17
113 139.09 radiation 40.0 270 < th dose independent rect. 14 17
118 139.15 temperature 10.0 270 > th dose dependent rect. 15 16
125 139.25 wind 9.0 270 < th dose independent rect. 14 17
136 139.43 wind 9.0 270 < th dose dependent rect. 1 8
137 139.44 radiation 40.0 270 < th dose dependent rect. 1 8
151 140.07 radiation 40.0 270 < th dose independent rect. 14 6
205 141.09 precipitation 0.1 270 < th dose independent rect. 20 18
206 141.09 precipitation 0.1 270 < th dose dependent rect. 20 18
213 141.30 humidity 50.0 270 > th dose independent rect. 21 16
216 141.32 temperature 10.0 90 > th dose independent rect. 16 17
217 141.34 precipitation 0.1 270 < th dose independent rect. 21 16
218 141.34 precipitation 0.1 270 < th dose dependent rect. 21 16
219 141.36 wind 9.0 90 < th dose independent rect. 16 17
227 141.47 precipitation 0.1 270 < th dose independent rect. 3 16
228 141.47 precipitation 0.1 270 < th dose dependent rect. 3 16
230 141.49 humidity 90.0 270 < th dose independent rect. 14 6
246 141.60 wind 9.0 270 < th dose dependent rect. 8 6
247 141.61 humidity 50.0 270 > th dose independent rect. 20 18
260 141.77 temperature 10.0 270 > th dose dependent rect. 15 4
268 141.89 precipitation 0.1 10 < th dose independent rect. 16 17
269 141.89 precipitation 0.1 10 < th dose dependent rect. 16 17
270 141.91 atmosphere 995.0 90 > th dose independent rect. 16 17
271 141.92 atmosphere 995.0 270 > th dose independent rect. 14 6
278 142.06 precipitation 0.1 90 < th dose independent rect. 3 6
279 142.06 precipitation 0.1 90 < th dose dependent rect. 3 6
284 142.22 wind 1.0 270 > th dose independent rect. 8 6
307 142.56 radiation 1.0 270 > th dose independent rect. 15 15
333 142.81 humidity 50.0 270 > th dose independent rect. 8 6
340 142.89 atmosphere 995.0 270 > th dose independent rect. 14 18
358 143.10 humidity 90.0 10 < th dose independent rect. 9 7
381 143.20 humidity 50.0 270 > th dose dependent rect. 19 7
388 143.31 atmosphere 1015.0 270 < th dose independent rect. 14 17
389 143.31 radiation 40.0 90 < th dose dependent rect. 15 18
407 143.45 humidity 50.0 270 > th dose dependent rect. 1 8
427 143.66 radiation 40.0 90 < th dose independent rect. 3 17
455 144.03 temperature 15.0 270 > th dose independent rect. 19 7
456 144.03 humidity 70.0 90 > th dose independent rect. 3 8
458 144.03 wind 9.0 90 < th dose dependent rect. 3 6
474 144.18 temperature 10.0 270 > th dose dependent rect. 20 17
476 144.27 temperature 20.0 10 > th dose independent rect. 9 7
496 144.44 temperature 10.0 90 > th dose independent rect. 3 6
498 144.44 humidity 50.0 90 > th dose independent rect. 3 6
499 144.44 atmosphere 995.0 90 > th dose independent rect. 3 6
500 144.44 atmosphere 1015.0 90 < th dose independent rect. 3 6
512 144.57 precipitation 0.1 270 < th dose independent rect. 9 16
513 144.57 precipitation 0.1 270 < th dose dependent rect. 9 16
519 144.62 humidity 50.0 90 > th dose dependent rect. 3 8
525 144.66 atmosphere 995.0 270 > th dose independent rect. 9 16
564 144.96 wind 9.0 10 < th dose independent rect. 9 7
565 144.96 radiation 1.0 10 > th dose independent rect. 9 7
617 145.38 wind 9.0 90 < th dose dependent rect. 16 17
634 145.47 atmosphere 1015.0 270 < th dose independent rect. 21 16
636 145.50 temperature 10.0 10 > th dose independent rect. 9 7
638 145.50 atmosphere 1015.0 10 < th dose independent rect. 9 7
639 145.50 precipitation 0.1 10 < th dose independent rect. 9 7
640 145.50 temperature 10.0 10 > th dose independent rect. 16 17
642 145.50 precipitation 0.1 10 < th dose dependent rect. 9 7
657 145.53 temperature 30.0 270 < th dose independent rect. 19 8
658 145.53 humidity 50.0 270 > th dose independent rect. 19 8
659 145.53 atmosphere 995.0 270 > th dose independent rect. 19 8
660 145.53 radiation 1.0 270 < th dose independent rect. 19 8
665 145.53 temperature 10.0 270 > th dose independent rect. 3 16
666 145.53 atmosphere 1015.0 270 < th dose independent rect. 3 16
667 145.53 radiation 1.0 270 < th dose dependent rect. 19 8
690 145.64 wind 9.0 270 < th dose independent rect. 19 8
728 145.77 temperature 10.0 270 > th dose dependent rect. 1 7
733 145.80 wind 9.0 10 < th dose independent rect. 16 17
738 145.86 temperature 10.0 90 > th dose dependent rect. 3 6
750 145.93 radiation 40.0 10 < th dose independent rect. 16 17
768 146.03 atmosphere 995.0 10 > th dose independent rect. 16 17
796 146.21 humidity 50.0 90 > th dose independent rect. 16 17
803 146.25 wind 1.0 270 > th dose independent rect. 14 17
814 146.33 atmosphere 1015.0 270 < th dose independent rect. 20 18
836 146.55 radiation 40.0 10 < th dose dependent rect. 16 18
843 146.56 temperature 10.0 90 > th dose dependent rect. 23 16
861 146.67 radiation 40.0 90 < th dose dependent rect. 13 22
863 146.71 radiation 1.0 270 < th dose dependent rect. 17 9
865 146.74 humidity 50.0 10 > th dose independent rect. 16 17
883 146.88 precipitation 0.1 10 < th dose independent rect. 3 7
884 146.88 precipitation 0.1 10 < th dose dependent rect. 3 7
887 146.90 radiation 1.0 270 < th dose dependent rect. 5 22
898 147.05 wind 1.0 270 > th dose independent rect. 9 4
919 147.12 wind 9.0 270 < th dose independent rect. 2 17
927 147.20 atmosphere 995.0 10 > th dose independent rect. 9 7
971 147.45 radiation 1.0 270 > th dose independent rect. 15 4