Os02g0513100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MtN3 protein precursor.
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Os02g0513100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MtN3 protein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 988.63 | 1.48 | 4.2 | -1.43 | 1.1 | 2.81 | -0.983 | -12.9 | -0.787 | 10.6 | 0.4854 | 2911 | -- | -- |
| 1103.89 | 1.55 | 3.99 | -1.63 | 1.32 | 1.08 | -0.617 | -- | -0.78 | 10.6 | 0.5 | 3520 | -- | -- |
| 992.54 | 1.47 | 4.2 | -1.48 | 1.1 | 2.88 | -- | -13.1 | -0.788 | 10.5 | 0.4767 | 2916 | -- | -- |
| 1108.93 | 1.55 | 3.99 | -1.58 | 1.26 | 1.02 | -- | -- | -0.834 | 10.6 | 0.4653 | 3528 | -- | -- |
| 1066.26 | 1.52 | 4.21 | -1.48 | -- | 3.15 | -- | -13.9 | -0.738 | -- | 0.5 | 2911 | -- | -- |
| 1108.97 | 1.56 | 4.01 | -1.36 | 1.24 | -- | -1.55 | -- | -0.907 | 10.8 | -- | -- | -- | -- |
| 1118.98 | 1.57 | 4.01 | -1.42 | 1.25 | -- | -- | -- | -0.912 | 10.8 | -- | -- | -- | -- |
| 1203.72 | 1.62 | 4.03 | -1.64 | -- | 1.09 | -- | -- | -0.839 | -- | 0.462 | 3528 | -- | -- |
| 1171.69 | 1.6 | 3.98 | -- | 1.26 | -0.705 | -- | -- | -0.758 | 10.8 | 0.4653 | 3528 | -- | -- |
| 1215.95 | 1.63 | 4.04 | -1.45 | -- | -- | -- | -- | -0.92 | -- | -- | -- | -- | -- |
| 1172.3 | 1.6 | 3.98 | -- | 1.26 | -- | -- | -- | -0.754 | 10.9 | -- | -- | -- | -- |
| 1244.16 | 1.64 | 4.03 | -- | -- | -1.06 | -- | -- | -0.866 | -- | 1.051 | 2863 | -- | -- |
| 1271.25 | 1.66 | 4.01 | -- | -- | -- | -- | -- | -0.759 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 989.44 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 5 | 1019.61 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 6 | 1019.64 | humidity | 70.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 14 | 1022.41 | wind | 7.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 16 | 1022.71 | wind | 7.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 24 | 1026.35 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 25 | 1026.41 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 29 | 1026.95 | wind | 7.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 32 | 1027.66 | wind | 7.0 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 36 | 1027.98 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 38 | 1028.01 | humidity | 70.0 | 30 | < th | dose independent | rect. | 7 | 5 |
| 72 | 1029.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 75 | 1030.16 | wind | 7.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 77 | 1030.54 | wind | 7.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 90 | 1031.83 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 94 | 1032.05 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 99 | 1032.20 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 103 | 1032.56 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 24 | 15 |
| 106 | 1032.62 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 115 | 1032.81 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 116 | 1032.82 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 119 | 1032.87 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 133 | 1033.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 141 | 1033.29 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 154 | 1033.62 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 157 | 1033.68 | humidity | 70.0 | 30 | > th | dose independent | rect. | 3 | 14 |
| 162 | 1033.80 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 165 | 1033.81 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 176 | 1033.98 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 178 | 1034.04 | wind | 7.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 197 | 1034.26 | wind | 7.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 198 | 1034.26 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 204 | 1034.33 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 217 | 1034.50 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 9 |
| 220 | 1034.52 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 234 | 1034.60 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 250 | 1034.68 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 254 | 1034.70 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 259 | 1034.72 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 19 | 15 |
| 265 | 1034.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 5 |
| 266 | 1034.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 5 |
| 272 | 1034.76 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 6 |
| 274 | 1034.78 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 281 | 1034.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 5 |
| 303 | 1034.85 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 19 | 18 |
| 304 | 1034.85 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 308 | 1034.87 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 321 | 1034.90 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 388 | 1035.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 7 |
| 401 | 1035.10 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 427 | 1035.17 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 493 | 1035.32 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 12 | 22 |
| 511 | 1035.36 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 24 | 21 |
| 571 | 1035.46 | atmosphere | 1015.0 | 14400 | < th | dose dependent | no | NA | NA |
| 579 | 1035.46 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 609 | 1035.52 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 610 | 1035.52 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 620 | 1035.52 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 630 | 1035.54 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 834 | 1036.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 9 |
| 835 | 1036.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 9 |
| 884 | 1036.14 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 918 | 1036.24 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 946 | 1036.28 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 947 | 1036.29 | wind | 9.0 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 981 | 1036.35 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 20 |
| 991 | 1036.37 | wind | 7.0 | 14400 | > th | dose independent | sin | 2 | NA |