BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0314800 Os08g0314800|AK098867
(660 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0314800 Similar to Poly(A)-binding protein 1176 0.0
Os09g0115400 Similar to Poly(A)-binding protein 924 0.0
Os04g0504800 Similar to Poly(A)-binding protein 795 0.0
AK108879 415 e-116
AK119744 395 e-110
Os03g0278500 Polyadenylate binding protein, human types 1, ... 373 e-103
Os06g0589700 Similar to Poly(A)-binding protein (Fragment) 201 1e-51
Os04g0682400 RNA-binding region RNP-1 (RNA recognition moti... 132 1e-30
Os10g0457000 RNA-binding region RNP-1 (RNA recognition moti... 120 4e-27
Os09g0462700 Similar to RNA Binding Protein 47 107 2e-23
Os04g0625800 Similar to RNA Binding Protein 45 105 1e-22
Os04g0449900 Similar to RNA Binding Protein 47 101 2e-21
Os03g0569900 Similar to RNA Binding Protein 45 99 1e-20
Os07g0615400 Similar to Oligouridylate binding protein 98 2e-20
Os03g0174100 Similar to RNA Binding Protein 45 97 5e-20
Os07g0631900 RNA-binding region RNP-1 (RNA recognition moti... 95 2e-19
Os03g0376600 Similar to 29 kDa ribonucleoprotein, chloropla... 92 1e-18
Os08g0520300 Similar to Oligouridylate binding protein 89 1e-17
Os12g0136200 WD40-like domain containing protein 82 2e-15
Os09g0279500 Similar to Plastid-specific 30S ribosomal prot... 77 3e-14
Os09g0565200 Similar to Nucleic acid-binding protein precursor 75 1e-13
Os08g0557100 Similar to Nucleic acid-binding protein precursor 74 5e-13
Os10g0151800 RNA-binding region RNP-1 (RNA recognition moti... 74 5e-13
Os04g0611500 RNA-binding region RNP-1 (RNA recognition moti... 73 8e-13
Os02g0815200 Similar to 29 kDa ribonucleoprotein, chloropla... 70 4e-12
Os08g0320100 RNA-binding region RNP-1 (RNA recognition moti... 70 7e-12
Os07g0158300 Similar to RNA binding protein 69 1e-11
Os07g0180800 RNA-binding region RNP-1 (RNA recognition moti... 68 2e-11
Os02g0788300 Similar to Eukaryotic translation initiation f... 68 3e-11
Os02g0221500 Paraneoplastic encephalomyelitis antigen famil... 67 5e-11
Os02g0567900 Similar to RNA Binding Protein 47 67 6e-11
>Os08g0314800 Similar to Poly(A)-binding protein
Length = 660
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/620 (93%), Positives = 581/620 (93%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML
Sbjct: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT
Sbjct: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV 220
EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV
Sbjct: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV 220
Query: 221 YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG
Sbjct: 221 YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
Query: 281 KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE 340
KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE
Sbjct: 281 KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE 340
Query: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK
Sbjct: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
Query: 401 EERRARLQAQFSQMRPMVMPPSVAPRMPMYXXXXXXXXXXLFYGQPPPAFVNPQPGFGFQ 460
EERRARLQAQFSQMRPMVMPPSVAPRMPMY LFYGQPPPAFVNPQPGFGFQ
Sbjct: 401 EERRARLQAQFSQMRPMVMPPSVAPRMPMYPPGVPGVGQQLFYGQPPPAFVNPQPGFGFQ 460
Query: 461 QHLIPGMRPSVGPIPNFVMPMVXXXXXXXXXXXXXXXTGGIQQPMPMGHQQMLPXXXXXX 520
QHLIPGMRPSVGPIPNFVMPMV TGGIQQPMPMGHQQMLP
Sbjct: 461 QHLIPGMRPSVGPIPNFVMPMVQQGQQPQRPAGRRAGTGGIQQPMPMGHQQMLPRGSRGG 520
Query: 521 XXXXXXXXMPDNAFRGVGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQQRL 580
MPDNAFRGVGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQQRL
Sbjct: 521 YRYASGRGMPDNAFRGVGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQQRL 580
Query: 581 MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQ 640
MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQ
Sbjct: 581 MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQ 640
Query: 641 QANTPTDQLAALTLSDGVVS 660
QANTPTDQLAALTLSDGVVS
Sbjct: 641 QANTPTDQLAALTLSDGVVS 660
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 18/289 (6%)
Query: 126 AANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGE-SKGYGFVQFELEEAAQNAI 184
A ++++ +LD S+ + L+D FS G+++S +V +++ S GY +V F A A+
Sbjct: 38 ATSLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARAL 97
Query: 185 SKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPI 244
LN +N K + + R+ S N+++KNL +S L + F FG I
Sbjct: 98 EMLNFTPINGKPIR----IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNI 153
Query: 245 TSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELK 304
S V E G+S+ +GFV FE + A A+ LNG +DK+ YV +K ERE
Sbjct: 154 LSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERE---- 209
Query: 305 EKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGS 364
N+ N N+Y+KNL +S +D LKEIF FG ITS VMR+ +G S+
Sbjct: 210 -----NVSGNPKFN---NVYVKNLSESTTED-NLKEIFGKFGPITSVVVMREGDGKSRCF 260
Query: 365 GFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQ 413
GFV F++ +DA+RA+ +NGK K YV AQ+K ER L+ +F +
Sbjct: 261 GFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEK 309
>Os09g0115400 Similar to Poly(A)-binding protein
Length = 662
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/636 (74%), Positives = 526/636 (82%), Gaps = 32/636 (5%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVGDLDVSVQDAQLFDVF+QVG VVSVRVCRDVNTR SLGYAYVN+SSPADAARALEML
Sbjct: 42 LYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEML 101
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
NFTPINGKPIRIMYSNRDPS RKSG ANIFIKNLDKSIDNKALYDTF VFGNILSCKVAT
Sbjct: 102 NFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVAT 161
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV 220
+ SGESKGYGFVQ+E +EAAQ AI KLNGML+NDKKVYVGPF+RKQER+N G KFNNV
Sbjct: 162 DASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPGQVKFNNV 221
Query: 221 YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
YVKNLSE+TTED+LKEIFGKFG ITS VVMREGDG+S+CFGFVNFE+PDDAA+AV++LNG
Sbjct: 222 YVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNG 281
Query: 281 KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE 340
KKFDDKEWYV RAQKKSEREMELKEKFEKN++EAADK Q TNLYLKNLDDS+DDD KL+E
Sbjct: 282 KKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSVDDD-KLRE 340
Query: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
+FA++GTITSCKVMRD NGVS+GSGFVAFKSAEDASRAL MN KM+GSKPLYVALAQRK
Sbjct: 341 LFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMNSKMVGSKPLYVALAQRK 400
Query: 401 EERRARLQAQFSQMRPMVMPPSVAPRMPMYXXXXXXXXXXLFYGQPPPAFVNPQPGFGFQ 460
E+R+ARLQAQFSQ+RP+ + PSV PRMPM+ LFYGQPPPAF+N QPGFGFQ
Sbjct: 401 EDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGVPGVGQQLFYGQPPPAFINTQPGFGFQ 460
Query: 461 QHLIPGMRPSVGPIPNFVMPMVXXXXXXXXXXXXXXXTGGIQQPMPMGHQ---------- 510
Q L+PGMRP GP+PNF+MPMV G Q P G +
Sbjct: 461 QPLMPGMRPGAGPMPNFIMPMVQQ---------------GQQPQRPAGRRAGAGGMQQPM 505
Query: 511 ----QMLPXXXXXXXXXXXXXXMPDNAFRGV-GGLVPSPYEMGRMPLSDAGAPPQVPIGA 565
Q + MPD A GV GG++PSPYEMG MP+ DA A VPIGA
Sbjct: 506 PMGQQQMMARGGRGYRYPTGRGMPDPAMHGVGGGVMPSPYEMGGMPMRDAAASQPVPIGA 565
Query: 566 LASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKA 625
LA+ALAN+ PDQQR+MLGE+LYPLVDQLEH+QAAKVTGMLLEMDQTEVLHL+ESP+ALKA
Sbjct: 566 LATALANAAPDQQRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKA 625
Query: 626 KVAEAMEVLRNAQQQQAN-TPTDQLAALTLSDGVVS 660
KVAEAMEVLR AQQ Q N TP QLA+L+L+DGVVS
Sbjct: 626 KVAEAMEVLRTAQQIQTNATPEQQLASLSLNDGVVS 661
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 28/294 (9%)
Query: 126 AANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEM-SGESKGYGFVQFELEEAAQNAI 184
A ++++ +LD S+ + L+D F+ G ++S +V ++ + S GY +V + A A+
Sbjct: 39 ATSLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARAL 98
Query: 185 SKLNGMLLNDKKVYV-----GPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFG 239
LN +N K + + P +RK SG N+++KNL +S L + F
Sbjct: 99 EMLNFTPINGKPIRIMYSNRDPSLRK------SGTA---NIFIKNLDKSIDNKALYDTFC 149
Query: 240 KFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSER 299
FG I S V + G+S+ +GFV +E + A A++ LNG +DK+ YV +K ER
Sbjct: 150 VFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQER 209
Query: 300 EMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNG 359
+ + + + N+Y+KNL ++ +D+ LKEIF FGTITS VMR+ +G
Sbjct: 210 D------------NSPGQVKFNNVYVKNLSENTTEDD-LKEIFGKFGTITSAVVMREGDG 256
Query: 360 VSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQ 413
SK GFV F+S +DA++A+ +NGK K YV AQ+K ER L+ +F +
Sbjct: 257 RSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEK 310
>Os04g0504800 Similar to Poly(A)-binding protein
Length = 659
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/624 (64%), Positives = 487/624 (78%), Gaps = 9/624 (1%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVGDL+ SV D+QL+++FSQ G V+SVRVCRD+++R SLGYAYVNF++P DAARALE+L
Sbjct: 41 LYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELL 100
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
NF P+NGKPIR+MYSNRDPSSR+SG+ANIFIKNLDK+ID+K L+DTFS FGNILSCKVAT
Sbjct: 101 NFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAFGNILSCKVAT 160
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV 220
+ G+SKG+GFVQ++ EAAQ+AI LNGML+NDK VYVGPF+RKQEREN KFNNV
Sbjct: 161 DEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNV 220
Query: 221 YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
+VKNLSESTT+++L +IFG +G ITS V+M DGKSRCFGF+NF++PDDAARAVE+LNG
Sbjct: 221 FVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNG 280
Query: 281 KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE 340
KK +DKEWYV RAQKKSERE+ELK +FE+++K+AADK QG NLY+KNLDDSI DD+ L E
Sbjct: 281 KKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQ-LCE 339
Query: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
+F+++G ITSCK+MRD NGVSKGSGFVAF + E+AS+AL MNGKMI KPLYVA AQRK
Sbjct: 340 LFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRK 399
Query: 401 EERRARLQAQFSQMRPMVMPPSVAPRMPMYXXXXXXXXXXLFYGQPPPAFVNPQPGFGFQ 460
E+R+A LQAQFSQ+RP+ M PS+APR+PMY LFYGQ PPA + PQPGFGFQ
Sbjct: 400 EDRKAMLQAQFSQVRPVPMTPSMAPRLPMY-PPMAPLGQQLFYGQAPPAIMPPQPGFGFQ 458
Query: 461 QHLIPGMRPSVGPIPNFVMPMVXXXXXXXXXXXXXXXTGGIQ--QPMPMGHQQMLPXXXX 518
Q L+PGMRP +PN+ +P+V G Q Q QQMLP
Sbjct: 459 QQLVPGMRPGGAHMPNYFVPVVQQGQQGPRPGIRRSGAGSAQGQQSAQPFQQQMLP--RG 516
Query: 519 XXXXXXXXXXMPD-NAFRGVGGLVPSPYEMGRMPLSDAGAPPQVPIGALASALANSPPDQ 577
MPD GV G + Y+MG P+ DAG P PIG L SALAN+ P+Q
Sbjct: 517 RVYRYPPAHNMPDVPPMPGVAGGMIQSYDMGGFPVRDAGLSP-APIGTLTSALANANPEQ 575
Query: 578 QRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRN- 636
QR +LGESLYPLV+ LE + AAKVTGMLLEMDQTEVLHL+ESP+ALK+KVAEAM+VLRN
Sbjct: 576 QRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNV 635
Query: 637 AQQQQANTPTDQLAALTLSDGVVS 660
AQQ ANTPT QLAAL+L D ++S
Sbjct: 636 AQQHNANTPTSQLAALSLGDAIIS 659
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 100/186 (53%), Gaps = 18/186 (9%)
Query: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMRE-GDGKSRCFGFVNFENPDDAARAVED 277
++YV +L S T+ L E+F + G + SV V R+ +S + +VNF NP DAARA+E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
LN + K V + N ++ ++ N+++KNLD +I D +
Sbjct: 100 LNFAPLNGKPIRVMYS----------------NRDPSSRRSGSANIFIKNLDKAI-DHKT 142
Query: 338 LKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALA 397
L + F+ FG I SCKV D G SKG GFV + E A A+ ++NG +I KP+YV
Sbjct: 143 LHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPF 202
Query: 398 QRKEER 403
RK+ER
Sbjct: 203 LRKQER 208
>AK108879
Length = 670
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 272/377 (72%), Gaps = 7/377 (1%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVG+L V +A L+++FSQ+G V S+RVCRD TR SLGYAYVNF SPAD RA+E L
Sbjct: 46 LYVGELHPDVTEAMLYEIFSQIGPVSSIRVCRDAITRRSLGYAYVNFHSPADCERAIESL 105
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
N+ I G+P R+M+S RDP+ R+SG NIFIKNLDK+IDNKAL+DTFS FGNILSCKV T
Sbjct: 106 NYALIKGQPCRLMWSQRDPALRRSGVGNIFIKNLDKTIDNKALHDTFSAFGNILSCKVVT 165
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQER----ENVSGNPK 216
+ G S+G+GFV +E EAA AI K+NGMLLN KV+VG + ++ER E + +
Sbjct: 166 DDQGASRGFGFVHYETREAADLAIDKVNGMLLNGIKVFVGHHISRKERISHLEELKA--Q 223
Query: 217 FNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVE 276
F NV++KNL E+ T++ L+ +F FG I S ++ R+ GKSR FGF+NF +DA +AVE
Sbjct: 224 FTNVFIKNLDEAVTDEELQALFEPFGEIQSAILQRDESGKSRGFGFINFVEHEDAQKAVE 283
Query: 277 DLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDE 336
LN + + K +V RAQKKSER EL+ +FE E K G NLY+KNLD+ + +D+
Sbjct: 284 ALNDVEVNGKRIFVGRAQKKSERTEELRRQFEALKLERMSKFHGVNLYVKNLDEMVTEDQ 343
Query: 337 KLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVAL 396
L+ F FG+I+S +VM D GVS+G GFV F + E+A+RA+ MNG+M+ KPLYVAL
Sbjct: 344 -LRMEFTPFGSISSLRVMVDEKGVSRGFGFVCFSAPEEAARAISEMNGRMVNGKPLYVAL 402
Query: 397 AQRKEERRARLQAQFSQ 413
AQR++ERRA+L+AQF+Q
Sbjct: 403 AQRRDERRAQLEAQFAQ 419
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 21/199 (10%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDL 278
+YV L TE L EIF + GP++S+ V R+ +S + +VNF +P D RA+E L
Sbjct: 46 LYVGELHPDVTEAMLYEIFSQIGPVSSIRVCRDAITRRSLGYAYVNFHSPADCERAIESL 105
Query: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
N + CR S+R+ L+ ++ N+++KNLD +I D++ L
Sbjct: 106 NYALIKGQP---CRLM-WSQRDPALR------------RSGVGNIFIKNLDKTI-DNKAL 148
Query: 339 KEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
+ F+ FG I SCKV+ D G S+G GFV +++ E A A+ +NG ++ ++V
Sbjct: 149 HDTFSAFGNILSCKVVTDDQGASRGFGFVHYETREAADLAIDKVNGMLLNGIKVFVGHHI 208
Query: 399 RKEERRARLQ---AQFSQM 414
++ER + L+ AQF+ +
Sbjct: 209 SRKERISHLEELKAQFTNV 227
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 576 DQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLR 635
+QQ+ +LGE LYPLV + + A+K+TGMLLEMD E+LHL+ESPDAL +K+ EA EVLR
Sbjct: 595 EQQKRILGERLYPLVAMRDAEHASKITGMLLEMDNGELLHLLESPDALASKIGEAQEVLR 654
Query: 636 NAQQQQ 641
QQ Q
Sbjct: 655 QHQQSQ 660
>AK119744
Length = 746
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/426 (50%), Positives = 271/426 (63%), Gaps = 60/426 (14%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVG+LD SV +A LF++FS +G V S+RVCRD TR SLGYAYVN++S D +ALE L
Sbjct: 50 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEEL 109
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
N+T I GKP RIM+S RDP+ RK+G N+FIKNLD +IDNKAL+DTF+ FGNILSCKVA
Sbjct: 110 NYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQ 169
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQER----ENVSGNPK 216
+ G SKGYGFV +E EAA NAI +NGMLLN+KKV+VG + K+ER E V N
Sbjct: 170 DELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEVKAN-- 227
Query: 217 FNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVE 276
F N+YVKN+ T+D +E+F K G ITS + R+ GKSR FGFVN+ + A+ AVE
Sbjct: 228 FTNIYVKNIDLDVTDDEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHEAASAAVE 287
Query: 277 DLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDE 336
LN +F ++ YV RAQKK ERE EL++++E E K QG NLY+KNL+D +DD E
Sbjct: 288 ALNDTEFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDD-E 346
Query: 337 KLKEIFADFGTITSCKVM--------------------------------------RDLN 358
KL+++F FGTITS KVM +D N
Sbjct: 347 KLRDMFTPFGTITSAKVMRDAMPAERSETPADEKKEESKEESKEESEKTEEGAEEKKDEN 406
Query: 359 ---------------GVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEER 403
G SKG GFV F + ++A++A+ MN KMI KPLYVALAQRK+ R
Sbjct: 407 KPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVR 466
Query: 404 RARLQA 409
+ +L+A
Sbjct: 467 KNQLEA 472
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 150/296 (50%), Gaps = 26/296 (8%)
Query: 126 AANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEEAAQNAI 184
+A++++ LD S+ L++ FS G + S +V + ++ S GY +V + E + A+
Sbjct: 47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKAL 106
Query: 185 SKLNGMLLNDKKVYV-----GPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFG 239
+LN ++ K + P +RK + NV++KNL + L + F
Sbjct: 107 EELNYTVIKGKPCRIMWSQRDPALRKTGQ---------GNVFIKNLDHAIDNKALHDTFA 157
Query: 240 KFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSER 299
FG I S V ++ G S+ +GFV++E + A A++ +NG ++K+ +V K ER
Sbjct: 158 AFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKER 217
Query: 300 EMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNG 359
M E+ + N TN+Y+KN+D + DDE +E+F G ITS + RD G
Sbjct: 218 -MSKFEEVKANF---------TNIYVKNIDLDVTDDE-FRELFEKHGDITSASIARDEQG 266
Query: 360 VSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQMR 415
S+G GFV + E AS A+ A+N + LYV AQ+K ER L+ Q+ R
Sbjct: 267 KSRGFGFVNYIKHEAASAAVEALNDTEFRGQKLYVGRAQKKHEREEELRKQYEAAR 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 568 SALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKV 627
SAL+ + P QQ+ MLGE+LYP + +++ + A K+TGMLLEMD +E+++L AL+AKV
Sbjct: 655 SALSGAAPGQQKQMLGEALYPKIAEMQPELAGKITGMLLEMDNSELINLTTDEAALRAKV 714
Query: 628 AEAMEV 633
EAM V
Sbjct: 715 EEAMSV 720
>Os03g0278500 Polyadenylate binding protein, human types 1, 2, 3, 4 family
protein
Length = 647
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 279/450 (62%), Gaps = 20/450 (4%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVGDL SV++ L +VF ++G++ SVRVCRD T SL Y YVN+ S ADAA ALE L
Sbjct: 40 LYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIALEKL 99
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
N + I KPIR+M+SNRDP +R+SG N+F+KNL+ +DN +L + F FG+ILSCKVA
Sbjct: 100 NHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAK 159
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNV 220
G S+GYGFVQF L+E+A +I LN ++++V F++K ER + + + K+ N+
Sbjct: 160 NEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSER-STNNDDKYTNL 218
Query: 221 YVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
Y+KNL + TE+ +K F ++G + SV +M+ DG S+ FGFV+F+NP+ A RA E +NG
Sbjct: 219 YMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNG 278
Query: 281 KKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKE 340
K YV RAQKK+ER+ L+ E+ E K+ G+N+Y+KN++D + DD L+E
Sbjct: 279 MLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNINDEVGDD-ALRE 337
Query: 341 IFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRK 400
F +FG ITS K+MRD G+SKG GFV + + E+A A+ M G M KPLYVA+AQRK
Sbjct: 338 RFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRK 397
Query: 401 EERRARLQAQFSQMRPMVMPPSVAPRMPMYXXXXXXXXXXLFYGQPPPAFVNPQPG---- 456
EERRA+L+ +F+++ MV + +P +P FY P + PG
Sbjct: 398 EERRAKLEQRFAELATMV--GATSPVIP--------TGYPQFYFAHPSTHLPQSPGRQGF 447
Query: 457 ----FGFQQHLIPGMRPSVGPIPNFVMPMV 482
G Q M PS I P++
Sbjct: 448 MYPPIGISQEWRHNMFPSSHNIQQIHSPIM 477
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Query: 565 ALASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALK 624
A + LA +PP++Q+ MLG LYPLV++ D A+K+TGMLLE+ +EV+ L+ S + L
Sbjct: 551 AFNNLLATAPPEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLS 610
Query: 625 AKVAEAMEVLRNAQQQQANTPTDQLA 650
AK+ E +++L Q+ P DQ A
Sbjct: 611 AKIEECVKLL----QEVKPKPEDQEA 632
>Os06g0589700 Similar to Poly(A)-binding protein (Fragment)
Length = 399
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 130/179 (72%), Gaps = 2/179 (1%)
Query: 250 MREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEK 309
MR+ +G SRCFGFVNFE + A AV++LNGK D YV RAQKKSER+ ELK KFE
Sbjct: 1 MRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEH 60
Query: 310 NIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAF 369
+ + +K Q NLYLKNLDD I+D E L+++F FG + SCKVM D +G SKG GFV+F
Sbjct: 61 DKNQKFEKLQTVNLYLKNLDDDIND-EHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSF 119
Query: 370 KSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQMRPM-VMPPSVAPRM 427
+ EDA+ A++ MNGKM+G KPLYVA+AQRKEER+A L A F+++R + M P++ P +
Sbjct: 120 ATVEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHFARVRALATMAPTLGPNI 178
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 163 SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERE-------NVSGNP 215
+G S+ +GFV FE E A+NA+ LNG + D +YV +K ER+ N
Sbjct: 5 NGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQ 64
Query: 216 KFN-----NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDD 270
KF N+Y+KNL + +++L+++F FG + S VM + G+S+ GFV+F +D
Sbjct: 65 KFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVED 124
Query: 271 AARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEK 309
A A+ +NGK K YV AQ+K ER+ L F +
Sbjct: 125 ANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHFAR 163
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 63/75 (84%)
Query: 560 QVPIGALASALANSPPDQQRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIES 619
Q P L ++LA++ P+QQR +LG+ L+PLV+QL +++A KVTGMLLE+D+TEVL+L+ES
Sbjct: 294 QAPSNNLQTSLASANPEQQREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVES 353
Query: 620 PDALKAKVAEAMEVL 634
PD L+ KVAEAM+VL
Sbjct: 354 PDTLRDKVAEAMKVL 368
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 72 RDVNTRLSLGYAYVNFSSPADAARALEMLNFTPINGKPIRIMYSNRDPSSR--------- 122
RD N LS + +VNF A A++ LN I + + + + +
Sbjct: 2 RDANG-LSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEH 60
Query: 123 -------KSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFE 175
K N+++KNLD I+++ L F FG + SCKV + G SKG GFV F
Sbjct: 61 DKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFA 120
Query: 176 LEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERE 209
E A NAI K+NG ++ K +YV RK+ER+
Sbjct: 121 TVEDANNAILKMNGKMVGKKPLYVAVAQRKEERK 154
>Os04g0682400 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 1008
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 180/384 (46%), Gaps = 46/384 (11%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVG+L SV +L ++F G +V RV D T LS GY +V +S P A+ A++ +
Sbjct: 295 LYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKRM 354
Query: 101 NFTPINGKPIRIMYS-------NRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNI 153
N + G +++ + N S+++ A +++ NL S++ L F FG +
Sbjct: 355 NGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGEV 414
Query: 154 LSCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV------------- 199
+ KVA + +G SKGYGFVQ+ A A+ LNG L++ +K+ V
Sbjct: 415 TNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSA 474
Query: 200 --GPFVRKQ---ERENVSGNPK---FNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMR 251
P + E + + K +N+YV N+ S L E+F FG IT V+
Sbjct: 475 VESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVA 534
Query: 252 EGDG-KSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKN 310
+ D ++ +GF+ F + + A +A+ +NG E + R S + ++
Sbjct: 535 DPDTFSAKGYGFIKFTDSESATKAIAAMNG-ALVGGEMIIVRVAGLSPSASISAVQTTQD 593
Query: 311 IKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFK 370
I + + LY+ NL S+ D K+ +FA FG IT KV+ +L V +
Sbjct: 594 INK-------SRLYITNLPRSMTAD-KMVNLFAPFGQIT--KVLMNLE-----YSLVWYA 638
Query: 371 SAEDASRALVAMNGKMIGSKPLYV 394
A A++A+ M+G M+ K L V
Sbjct: 639 DAPSATKAVQHMDGYMVEGKRLVV 662
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 186/408 (45%), Gaps = 58/408 (14%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYV +L +S+ +L +F G V + +V +D T LS GY +V +SSP AA A+ L
Sbjct: 390 LYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHL 449
Query: 101 NFTPINGKPIRIMYSN----------RDPSSRKSGA---------------ANIFIKNLD 135
N ++G+ I + S PS+ ++ A +N+++ N+
Sbjct: 450 NGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMP 509
Query: 136 KSIDNKALYDTFSVFGNILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLND 194
SID K L + F FG I +V + + +KGYGF++F E+A AI+ +NG L+
Sbjct: 510 SSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGG 569
Query: 195 KKVYV--------GPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITS 246
+ + V Q ++++ + +Y+ NL S T D + +F FG IT
Sbjct: 570 EMIIVRVAGLSPSASISAVQTTQDINK----SRLYITNLPRSMTADKMVNLFAPFGQITK 625
Query: 247 VVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEK 306
V++ E + V + + A +AV+ ++G + K V R++ + + K
Sbjct: 626 VLMNLE-------YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSELCTTNASQAGGK 678
Query: 307 FEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKGSGF 366
K I A NLY+ + S+ +D+ + ++F FG + ++ R + G
Sbjct: 679 PIKEIDMA-------NLYVGRVPSSLTEDQFI-DLFRPFGRVVQARMFR-----FQRYGM 725
Query: 367 VAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQM 414
V F + A+ A+ ++G IG L V +A E A A SQM
Sbjct: 726 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQM 773
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 16/285 (5%)
Query: 128 NIFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEEAAQNAISK 186
N+++ NL S+ + L + F FG I+ +V + +G S+GYGFV++ A AI +
Sbjct: 294 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 353
Query: 187 LNGMLLNDK--KVYVGPFVRKQER-ENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGP 243
+NG L+ KV V F ++ + S +YV NLS S D L +F FG
Sbjct: 354 MNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFGE 413
Query: 244 ITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREME 302
+T+ V ++ G S+ +GFV + +P AA AV LNG+ D ++ V + S
Sbjct: 414 VTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNS 473
Query: 303 LKEKFEKNIKEAADKNQGT---------NLYLKNLDDSIDDDEKLKEIFADFGTITSCKV 353
E A + T NLY+ N+ SI D +KL E+F FG IT +V
Sbjct: 474 AVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSI-DTKKLVELFLPFGKITHARV 532
Query: 354 MRDLNGVS-KGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALA 397
+ D + S KG GF+ F +E A++A+ AMNG ++G + + V +A
Sbjct: 533 VADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIVRVA 577
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 178/409 (43%), Gaps = 41/409 (10%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYV ++ S+ +L ++F G + RV D +T + GY ++ F+ A +A+ +
Sbjct: 503 LYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATKAIAAM 562
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGA--------ANIFIKNLDKSIDNKALYDTFSVFGN 152
N + G+ I + + PS+ S + ++I NL +S+ + + F+ FG
Sbjct: 563 NGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQ 622
Query: 153 ILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQE----- 207
I + E Y V + +A A+ ++G ++ K++ V++ E
Sbjct: 623 ITKVLMNLE-------YSLVWYADAPSATKAVQHMDGYMVEGKRL----VVKRSELCTTN 671
Query: 208 RENVSGNP----KFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFV 263
G P N+YV + S TED ++F FG + + R + +G V
Sbjct: 672 ASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMFR-----FQRYGMV 726
Query: 264 NFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREME---LKEKFEKNIKEAADKNQG 320
F+NP AA A++ L+G + V A +E L + N + D
Sbjct: 727 RFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDM--- 783
Query: 321 TNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRD-LNGVSKGSGFVAFKSAEDASRAL 379
TNLY+ +L +++ E+L ++F G IT KV+ + GVSKG GFV F A A+ AL
Sbjct: 784 TNLYVSHLPSYVNN-ERLIDLFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVAL 842
Query: 380 VAMNGKMIGSKPLYVALAQRKEERRARLQAQFSQMRPMVMPPSVAPRMP 428
MNG + L V +A + + A F M P A +P
Sbjct: 843 THMNGYPLDGHVLEVRIAGVHPDAMSSYMAHFYSHFTMHDPAKAAVGIP 891
>Os10g0457000 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 355
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Query: 42 YVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEMLN 101
YVG+LD V + L+++F Q G VV+V V +D T L GY +V F S DA A+++LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 102 FTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSC-KVAT 160
+ GKPIR+ +++D S G AN+FI NLD +D K LYDTFS FG I++ K+
Sbjct: 88 MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 146
Query: 161 E-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNP 215
+ +G S+G+GFV ++ E++ AI +N L ++ + V +K + G P
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERHGTP 202
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 102/190 (53%), Gaps = 21/190 (11%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDL 278
YV NL +E+ L E+F + GP+ +V V ++ + +GFV F + +DA A++ L
Sbjct: 27 TYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIL 86
Query: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
N K K R K S+ + L + G NL++ NLD +D+ + L
Sbjct: 87 NMIKLYGKP---IRVNKASQDKKSL--------------DVGANLFIGNLDPDVDE-KLL 128
Query: 339 KEIFADFGTI-TSCKVMRDL-NGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVAL 396
+ F+ FG I T+ K+MRD G S+G GFV++ S E + +A+ AMN + + ++P+ V+
Sbjct: 129 YDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSY 188
Query: 397 AQRKEERRAR 406
A +K+ + R
Sbjct: 189 AYKKDTKGER 198
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 120 SSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEE 178
S+ ++ A ++ NLD + + L++ F G +++ V + ++ +GYGFV+F EE
Sbjct: 18 SAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEE 77
Query: 179 AAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIF 238
A AI LN + L K + V + ++ +V N+++ NL E L + F
Sbjct: 78 DADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTF 132
Query: 239 GKFGPI-TSVVVMREGD-GKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQK- 295
FG I T+ +MR+ + G SR FGFV++++ + + +A+E +N + ++ V A K
Sbjct: 133 SAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
Query: 296 --KSEREMELKEKFEKNIKEAADKNQGTNLY 324
K ER E+ + KN+ ++
Sbjct: 193 DTKGERHGTPAERLLAANNPGSQKNRPHTMF 223
>Os09g0462700 Similar to RNA Binding Protein 47
Length = 441
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 133/256 (51%), Gaps = 21/256 (8%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
++VGDL + + L F G VV+++V R+ T S GY +V F S A A + LE
Sbjct: 117 IWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGF 176
Query: 101 --NFTPINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSV-FGNIL 154
+ P +P RI +++ R+S A +IF+ +L +++ L +TFS + ++
Sbjct: 177 AGHIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVK 236
Query: 155 SCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVS- 212
KV + +G SKGYGFV+F + +A++++NG+ + + + +GP ++
Sbjct: 237 GAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGP 296
Query: 213 --------GNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVN 264
G+ V+V L + +ED+L++ F ++G I+SV + GK +C GFV
Sbjct: 297 TGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPV---GK-QC-GFVQ 351
Query: 265 FENPDDAARAVEDLNG 280
F +A A++ LNG
Sbjct: 352 FVQRKNAEDALQGLNG 367
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQ-VGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
++VGDL V D L + FS+ SV +V D NT S GY +V F + A+
Sbjct: 210 IFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTE 269
Query: 100 LNFTPINGKPIRIMYSNRDPSSRKSGAA-------------NIFIKNLDKSIDNKALYDT 146
+N + +P+RI + +S SG +F+ LD ++ L T
Sbjct: 270 MNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPNVSEDDLRQT 329
Query: 147 FSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKV 197
FS +G I S K+ K GFVQF + A++A+ LNG + + V
Sbjct: 330 FSQYGEISSVKIPV-----GKQCGFVQFVQRKNAEDALQGLNGSTIGKQTV 375
>Os04g0625800 Similar to RNA Binding Protein 45
Length = 425
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 129/255 (50%), Gaps = 20/255 (7%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
L++GDL + ++ +++ F+ G V SV++ RD + GY +V F+S A A R L+
Sbjct: 92 LWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQTY 151
Query: 101 N--FTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSV-FGNILSCK 157
N P R+ +++ + IF+ +L + + L +TF V + ++ K
Sbjct: 152 NGQMMPNVEMVFRLNWASAGEKRDDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAK 211
Query: 158 VATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRK-----QER-EN 210
V T+ M+ SKGYGFV+F A++++NGML + + + +GP K QER N
Sbjct: 212 VVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQERVPN 271
Query: 211 VSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNF 265
G +P ++V L + TED LK++F +G + V + GK RC GFV +
Sbjct: 272 AQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPV---GK-RC-GFVQY 326
Query: 266 ENPDDAARAVEDLNG 280
N A +A+ L G
Sbjct: 327 VNRPSAEQALAVLQG 341
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 128 NIFIKNLDKSIDNKALYDTFSVFGNILSCK-VATEMSGESKGYGFVQFELEEAAQNAISK 186
++I +L +D +Y+ F+ G + S K + + SG+ +GYGFV+F AA +
Sbjct: 91 TLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQT 150
Query: 187 LNG-MLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPIT 245
NG M+ N + V+ + E+ + + P + ++V +L+ T+ L+E F P
Sbjct: 151 YNGQMMPNVEMVFRLNWASAGEKRDDT--PDYT-IFVGDLAADVTDYLLQETFRVHYPSV 207
Query: 246 --SVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMEL 303
+ VV + +S+ +GFV F +P + ARA+ ++NG + + A K ++
Sbjct: 208 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 267
Query: 304 KEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVSKG 363
+ + + D N T +++ LD ++ +D LK++FA +G + K+ V K
Sbjct: 268 RVPNAQGAQSENDPNN-TTIFVGGLDPNVTED-VLKQVFAPYGEVVHVKIP-----VGKR 320
Query: 364 SGFVAFKSAEDASRALVAMNGKMIGSK 390
GFV + + A +AL + G +IG +
Sbjct: 321 CGFVQYVNRPSAEQALAVLQGTLIGGQ 347
>Os04g0449900 Similar to RNA Binding Protein 47
Length = 387
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 133/257 (51%), Gaps = 24/257 (9%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
++VGDL + + L F G VV+++V R+ T S GY +V F S A +AL+
Sbjct: 67 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ-- 124
Query: 101 NFT----PINGKPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFS-VFGN 152
NFT P +P ++ +++ ++S A +IF+ +L + ++ L + F+ + +
Sbjct: 125 NFTGHVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYRS 184
Query: 153 ILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERE-- 209
+ KV + +G S+GYGFV+F + +A++++NG + + + +GP ++
Sbjct: 185 VKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDS 244
Query: 210 ------NVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFV 263
+ G+ VYV L + +ED L++ F K+G + SV + GK +C GFV
Sbjct: 245 GSSTPGHSDGDSTNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPL---GK-QC-GFV 299
Query: 264 NFENPDDAARAVEDLNG 280
F + DA A++ LNG
Sbjct: 300 QFVSRTDAEEALQGLNG 316
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 141/285 (49%), Gaps = 20/285 (7%)
Query: 129 IFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISKL 187
I++ +L +D L+ F G +++ KV +G+S+GYGFV+F +A+ A+
Sbjct: 67 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQNF 126
Query: 188 NGMLLNDK----KVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFG-KFG 242
G ++ + K+ + ++R V+ + +++V +L+ T++ L E+F K+
Sbjct: 127 TGHVMPNTDRPFKLNWASYSMGEKRSEVASD---YSIFVGDLAADVTDEMLMELFANKYR 183
Query: 243 PITSV-VVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREM 301
+ V++ G+SR +GFV F + +D + A+ ++NG + + A +
Sbjct: 184 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGD 243
Query: 302 ELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGVS 361
+ ++ ++ +Y+ LD ++ +DE L++ FA +G + S K+ +
Sbjct: 244 SGSSTPGHSDGDSTNRT----VYVGGLDPNVSEDE-LRKAFAKYGDVASVKIP-----LG 293
Query: 362 KGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQRKEERRAR 406
K GFV F S DA AL +NG +IG + + ++ + +++R
Sbjct: 294 KQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPSHKQSR 338
>Os03g0569900 Similar to RNA Binding Protein 45
Length = 402
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 27/265 (10%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
L++GDL +++ L++ FSQ G ++S ++ R+ T GY ++ F S A A + L+
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 101 N--FTPINGKPIRIMYSNRDPSSRKSGAAN---IFIKNLDKSIDNKALYDTFSV-FGNIL 154
N P + ++ ++ ++ + IF+ +L + + L DTF + ++
Sbjct: 129 NGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVK 188
Query: 155 SCKVATEMS-GESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQE------ 207
KV + S G SKGYGFV+F + A++++NG + + + +GP K+
Sbjct: 189 GAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQ 248
Query: 208 ----RENVSG-----NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSR 258
+N G +P V+V L S T++ LK+ F +G + V + GK R
Sbjct: 249 PSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPV---GK-R 304
Query: 259 CFGFVNFENPDDAARAVEDLNGKKF 283
C GFV + N A A+ LNG +
Sbjct: 305 C-GFVQYSNRASAEEAIRMLNGSQL 328
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 132/278 (47%), Gaps = 15/278 (5%)
Query: 129 IFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISKL 187
++I +L ++ LY+ FS G ++S K+ + +G+ +GYGF++F A+ +
Sbjct: 69 LWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVLQGY 128
Query: 188 NG-MLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIF-GKFGPIT 245
NG M+ N +V+ + E + ++V +L+ T+ L++ F + +
Sbjct: 129 NGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVK 188
Query: 246 SV-VVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKK----SERE 300
VV G+S+ +GFV F + D+ RA+ ++NG+ + + A K +++
Sbjct: 189 GAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQ 248
Query: 301 MELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCKVMRDLNGV 360
+ + +D N T +++ LD S+ DE LK+ F+ +G + K+ V
Sbjct: 249 PSATYQNTQGTDSDSDPNN-TTVFVGGLDPSV-TDEVLKQAFSPYGELVYVKIP-----V 301
Query: 361 SKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
K GFV + + A A+ +NG +G + + ++ +
Sbjct: 302 GKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGR 339
>Os07g0615400 Similar to Oligouridylate binding protein
Length = 427
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 39/277 (14%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+YVG++ V V +A L +VF G V ++ R + Y +V++ AA ++ L
Sbjct: 67 VYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSS----YGFVDYYDRRSAALSILTL 122
Query: 101 NFTPINGKPIRIMYSNRDPSSR-KSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA 159
N I G+ IR+ ++ + NIF+ +L + + AL+ FS + + +V
Sbjct: 123 NGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDARVM 182
Query: 160 TEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVR--------KQEREN 210
+ +G S+GYGFV F ++ AQ+AI+ LNG L +++ + + +N
Sbjct: 183 WDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQTSDSKN 242
Query: 211 VS--------------------GNPKFNNVYVKNLSESTTEDNLKEIFGKFGP-ITSVVV 249
V+ NP++ VYV NL+ T+D L +F G V
Sbjct: 243 VADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEEVR 302
Query: 250 MREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDK 286
++ G G FGFV + N +AA A++ NG+ K
Sbjct: 303 IQLGKG----FGFVRYSNHAEAALAIQMGNGRILGGK 335
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 133/306 (43%), Gaps = 29/306 (9%)
Query: 112 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGF 171
I+ N P S ++++ N+ + L + F G + CK+ + E YGF
Sbjct: 50 ILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRK---EKSSYGF 106
Query: 172 VQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTE 231
V + +A +I LNG + + + V +RE+ + + N++V +LS T+
Sbjct: 107 VDYYDRRSAALSILTLNGKQIFGQLIRVNWAYASGQREDTTDHF---NIFVGDLSPEVTD 163
Query: 232 DNLKEIFGKFGPITSVVVMR-EGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYV 290
L F + + VM + G+SR +GFV+F N DA A+ DLNG+ ++
Sbjct: 164 SALFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQ-IR 222
Query: 291 CRAQKKSEREMELKEKFEKNI-----------KEAADKN------QGTNLYLKNLDDSID 333
C K E + KN+ KE A+++ Q +Y+ NL +
Sbjct: 223 CNWATKGASNGEQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVT 282
Query: 334 DDEKLKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLY 393
D L +F G +V L KG GFV + + +A+ A+ NG+++G KP+
Sbjct: 283 QD-VLHRLFHALGAGAIEEVRIQL---GKGFGFVRYSNHAEAALAIQMGNGRILGGKPIK 338
Query: 394 VALAQR 399
+ +
Sbjct: 339 CSWGNK 344
>Os03g0174100 Similar to RNA Binding Protein 45
Length = 416
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 37/272 (13%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
L++GDL + L++ F+ G + SV++ R+ T L GY ++ F S A + L+
Sbjct: 18 LWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQTY 77
Query: 101 NFTPING--KPIRIMYSNRDPSSRKSGAA---NIFIKNLDKSIDNKALYDTFSV-FGNIL 154
N T + G R+ +++ R+ A +IF+ +L + + L +TF V + ++
Sbjct: 78 NGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVK 137
Query: 155 SCKVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENV-- 211
KV T+ +G SKGYGFV+F E A++++NGM + + + + + K+ +
Sbjct: 138 GAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQ 197
Query: 212 -----------------------SGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVV 248
+P +++ NL ++ TED L++I +FG + V
Sbjct: 198 YGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDELRQICVQFGELIYVK 257
Query: 249 VMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
+ ++ GFV + + A AV+ L+G
Sbjct: 258 I-----PANKACGFVQYASRASAEEAVQRLHG 284
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 129/283 (45%), Gaps = 29/283 (10%)
Query: 128 NIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISK 186
++I +L D LY+ F+ G + S K+ +++ +GYGF++F E A+ +
Sbjct: 17 TLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVLQT 76
Query: 187 LNGMLL----NDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFG 242
NG + + ++ F + R + + ++++V +L+ T+ L+E F
Sbjct: 77 YNGTQMPGTEHTFRLNWASFSSGERRPDAGPD---HSIFVGDLAPDVTDYLLQETFRVSY 133
Query: 243 PIT--SVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSERE 300
P + VV G+S+ +GFV F + ++ RA+ ++NG + + A K
Sbjct: 134 PSVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTG 193
Query: 301 MELKEKFEKNIKEAA------------DKN-QGTNLYLKNLDDSIDDDEKLKEIFADFGT 347
+L+ K + AA D + T +++ NLD ++ +DE L++I FG
Sbjct: 194 SQLQYGAAKAMYPAAGYAVPQVQPVLPDSDPTNTTIFIGNLDQNVTEDE-LRQICVQFGE 252
Query: 348 ITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSK 390
+ K+ +K GFV + S A A+ ++G IG +
Sbjct: 253 LIYVKI-----PANKACGFVQYASRASAEEAVQRLHGTTIGQQ 290
>Os07g0631900 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 264
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
++VG+L SV AQL +F Q GSV V V D T S G+ +V S+ +A A+E
Sbjct: 82 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 141
Query: 101 NFTPINGKPIRIMYS---NRD---PSSRKSGAAN------IFIKNLDKSIDNKALYDTFS 148
N G+P+R+ RD P S + G +N +++ NL +DN L + FS
Sbjct: 142 NGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFS 201
Query: 149 VFGNILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
G +L KV + SG S+G+GFV + E NAIS L+G+ L+ +++ V
Sbjct: 202 EQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRV 253
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 129 IFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEEAAQNAISKL 187
+F+ NL S+D+ L F G++ +V + +G S+G+GFV E A A+ +
Sbjct: 82 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 141
Query: 188 NGMLLNDK--KVYVGP------FVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFG 239
NG + +V GP F + R S N +YV NL+ L+ +F
Sbjct: 142 NGYTFQGRPLRVNSGPPPPRDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDNSTLENLFS 201
Query: 240 KFGPI--TSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKS 297
+ G + V+ RE G+SR FGFV + + ++ A+ +L+G D ++ V A+ K
Sbjct: 202 EQGTVLDAKVIYDRE-SGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKP 260
Query: 298 EREM 301
R+
Sbjct: 261 RRQF 264
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSV-VVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
V+V NL S L +F + G + V VV G+SR FGFV ++A AVE
Sbjct: 82 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQF 141
Query: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKN--QGTNLYLKNLDDSIDDDE 336
NG F + V ++ F N LY+ NL +D+
Sbjct: 142 NGYTFQGRPLRVNSGPPPP------RDDFAPRSPRGGGSNFDSSNKLYVGNLAWGVDN-S 194
Query: 337 KLKEIFADFGTITSCKVMRDL-NGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
L+ +F++ GT+ KV+ D +G S+G GFV + SAE+ + A+ ++G + + + V
Sbjct: 195 TLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVT 254
Query: 396 LAQRKEERR 404
+A+ K R+
Sbjct: 255 VAESKPRRQ 263
>Os03g0376600 Similar to 29 kDa ribonucleoprotein, chloroplast precursor
(RNA-binding protein cp29)
Length = 265
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
++VG+L SV AQL +F Q GSV V V D T S G+ +V SS + A+E
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQF 147
Query: 101 NFTPINGKPIRIMYS---NRDPSSRKS--GAAN-IFIKNLDKSIDNKALYDTFSVFGNIL 154
N ++G+ +R+ R+ SS+++ G AN +++ NL +DN AL + FS G +L
Sbjct: 148 NGYILDGRSLRVNSGPPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVL 207
Query: 155 SCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
KV + SG S+G+GFV + E +NA+S L+G ++ +++ V
Sbjct: 208 EAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRV 253
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 129 IFIKNLDKSIDNKALYDTFSVFGNILSCKVATE-MSGESKGYGFVQFELEEAAQNAISKL 187
+F+ NL S+D+ L F G++ +V + ++G S+G+GFV E + A+ +
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQF 147
Query: 188 NGMLLNDKKVYV--GPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPI- 244
NG +L+ + + V GP +++ + + N VYV NLS L +F G +
Sbjct: 148 NGYILDGRSLRVNSGPPPPREQSSQRAPRGEANRVYVGNLSWGVDNAALANLFSGEGEVL 207
Query: 245 -TSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSER 299
V+ RE G+SR FGFV + + ++ AV +L+G D ++ V A+ K R
Sbjct: 208 EAKVIYDRE-SGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVTVAESKPPR 262
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSV-VVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
V+V NL S L +F + G + V V+ + G+SR FGFV + ++ AVE
Sbjct: 88 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQF 147
Query: 279 NGKKFDDKEWYVCRA-----QKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSID 333
NG D + V ++ S+R A + + +Y+ NL +D
Sbjct: 148 NGYILDGRSLRVNSGPPPPREQSSQR---------------APRGEANRVYVGNLSWGVD 192
Query: 334 DDEKLKEIFADFGTITSCKVMRDL-NGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPL 392
+ L +F+ G + KV+ D +G S+G GFV + SAE+ A+ ++G + + +
Sbjct: 193 N-AALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQI 251
Query: 393 YVALAQRKEERR 404
V +A+ K RR
Sbjct: 252 RVTVAESKPPRR 263
>Os08g0520300 Similar to Oligouridylate binding protein
Length = 447
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+YVG++ +V ++ L +VF G V ++ R + + +V++ AA A+ L
Sbjct: 75 VYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMTL 130
Query: 101 NFTPINGKPIRIMYSNRDPSSR-KSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA 159
+ I G+ I++ ++ SG +IF+ +L +++ LY FS + + +V
Sbjct: 131 HGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVM 190
Query: 160 TE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVR-----KQE------ 207
+ +G S+GYGFV F ++ A+ AI+++ G L +++ + KQE
Sbjct: 191 WDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAEEKQETDNHNA 250
Query: 208 ---------------------RENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKF--GPI 244
+EN NP VYV NL D L F G I
Sbjct: 251 VVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAI 310
Query: 245 TSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
V V ++ + FGFV + N +AA A++ NG
Sbjct: 311 EEVRVQQD-----KGFGFVRYSNHGEAALAIQMANG 341
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 37/304 (12%)
Query: 118 DPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELE 177
DPS+ +S +++ N+ ++ L + F G + CK+ + E +GFV +
Sbjct: 68 DPSTCRS----VYVGNVHPNVTESLLIEVFQSSGLVERCKL---IRKEKSSFGFVDYYDR 120
Query: 178 EAAQNAISKLNGMLLNDKKVYVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEI 237
+A AI L+G + + + V +RE+ SG+ +++V +LS + L
Sbjct: 121 RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHF---HIFVGDLSSEVNDATLYAC 177
Query: 238 FGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKK 296
F + + VM + G+SR +GFV+F N +A A+ ++ GK ++ A K
Sbjct: 178 FSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKN 237
Query: 297 SEREME---------LKEKFEKNIKEAADKNQG-----------TNLYLKNLDDSIDDDE 336
+ E + L N A ++ G T +Y+ NL ++ DE
Sbjct: 238 NAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDE 297
Query: 337 KLKEIF-ADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVA 395
+ + G I +V +D KG GFV + + +A+ A+ NG ++ KP+ +
Sbjct: 298 LHRHFYNLGVGAIEEVRVQQD-----KGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCS 352
Query: 396 LAQR 399
+
Sbjct: 353 WGNK 356
>Os12g0136200 WD40-like domain containing protein
Length = 515
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+YVG + V L + VG VV VR+ R + S GYA+VNF + A +A++ L
Sbjct: 126 VYVGGISSDVSSEDLKRLCEPVGEVVEVRMMRGKDD--SRGYAFVNFRTKGLALKAVKEL 183
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG-NILSCKV- 158
N + GK IR+ S +FI N+ S + G +L +
Sbjct: 184 NNAKLKGKRIRV--------SSSQAKNKLFIGNVPHSWTDDDFRKVVEEVGPGVLKADLM 235
Query: 159 ATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLN-DKKVYVGPFVRKQERENVSGNPKF 217
+ ++GYGFV++ A+ A +++ D + + ++ S + +
Sbjct: 236 KVSSANRNRGYGFVEYYNHACAEYARQEMSSPTFKLDSNAPTVSWADPKNNDSASTS-QV 294
Query: 218 NNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVE- 276
+VYVKNL ++ T+ LK +F G I VV+ G +GFV+F++ A RA++
Sbjct: 295 KSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRGGHDNRYGFVHFKDRSMAMRALQN 354
Query: 277 ----DLNGKKFDDKEWYVCRAQKKSER 299
+L+G+ D A KK +R
Sbjct: 355 TERYELDGQVLDCSLAKPPAADKKDDR 381
>Os09g0279500 Similar to Plastid-specific 30S ribosomal protein 2, chloroplast
precursor (PSRP- 2)
Length = 245
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 12/171 (7%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LYVG++ +V + +L +F+ G+V V D T S + +V S+P +A A+E L
Sbjct: 72 LYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIESL 131
Query: 101 NFTPINGKPIRIMYS-----NRDPSSRK------SGAANIFIKNLDKSIDNKALYDTFSV 149
N T + G+ I++ + N D S+ + +++ NL KS+ + L + FS
Sbjct: 132 NETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKNFFSE 191
Query: 150 FGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
G +LS V+ + +SKGYGFV F EE Q A+S N L + + V
Sbjct: 192 KGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRV 242
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVEDL 278
+YV N+ + T D L +F G + VM + G+SR FGFV P++A A+E L
Sbjct: 72 LYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIESL 131
Query: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADK------NQGTNLYLKNLDDSI 332
N + ++ V + E F NI +A + + +Y+ NL S+
Sbjct: 132 NETEVGGRKIKV-----------NVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSV 180
Query: 333 DDDEKLKEIFADFGTITSCKVMRDLNGV--SKGSGFVAFKSAEDASRALVAMNGKMIGSK 390
E LK F++ G + S V R + G SKG GFV F S E+ A+ N + +
Sbjct: 181 -TTEMLKNFFSEKGEVLSATVSR-IPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQ 238
Query: 391 PLYV 394
P+ V
Sbjct: 239 PIRV 242
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 9/178 (5%)
Query: 125 GAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVA-TEMSGESKGYGFVQFELEEAAQNA 183
A +++ N+ +++ N L F+ G + +V + +G S+ +GFV E A A
Sbjct: 68 AARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAA 127
Query: 184 ISKLNGMLLNDKKVYVG---PFVRKQERENVSGNPKFNN----VYVKNLSESTTEDNLKE 236
I LN + +K+ V F+ +R P F + VYV NL++S T + LK
Sbjct: 128 IESLNETEVGGRKIKVNVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKN 187
Query: 237 IFGKFGPITSVVVMR-EGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA 293
F + G + S V R G KS+ +GFV F + ++ AV N + + + V +A
Sbjct: 188 FFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQPIRVNKA 245
>Os09g0565200 Similar to Nucleic acid-binding protein precursor
Length = 322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 215 PKFNNVYVKNLSESTTEDNLKEIFGKFG--PITSVVVMREGDGKSRCFGFVNFENPDDAA 272
P+ VYV NL + L ++F + G ++ V+ RE D +SR FGFV ++A
Sbjct: 140 PEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETD-RSRGFGFVTMSTVEEAE 198
Query: 273 RAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSI 332
+AVE + D + V +A + R +F + + +Y+ NL +
Sbjct: 199 KAVEMFHRYDVDGRLLTVNKAAPRGARVERPPRQFGPSFR----------IYVGNLPWQV 248
Query: 333 DDDEKLKEIFADFGTITSCKVMRDL-NGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKP 391
DD +L ++F++ G + +V+ D G S+G GFV + E+ A+ A++G+ + +
Sbjct: 249 DDS-RLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRA 307
Query: 392 LYVALAQRKEERR 404
L V +A+ + RR
Sbjct: 308 LRVNVAEERPPRR 320
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+YVG+L + +L +F Q G V V + T S G+ +V S+ +A +A+EM
Sbjct: 145 VYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 204
Query: 101 NFTPINGKPIRIMYS-------NRDPSSRKSGAA-NIFIKNLDKSIDNKALYDTFSVFGN 152
+ ++G+ + + + R P R+ G + I++ NL +D+ L FS G
Sbjct: 205 HRYDVDGRLLTVNKAAPRGARVERPP--RQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGK 262
Query: 153 ILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
++ +V + +G S+G+GFV +E +AI+ L+G L+ + + V
Sbjct: 263 VVDARVVYDRETGRSRGFGFVTMATQEELDDAIAALDGQSLDGRALRV 310
>Os08g0557100 Similar to Nucleic acid-binding protein precursor
Length = 194
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+YVG+L V L +F Q G V V + T S G+ +V S+ +A +A+EML
Sbjct: 18 VYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIEML 77
Query: 101 NFTPINGKPIRIMYSNR---------DPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG 151
N ING R++ NR P + + A ++ NL +D+ L FS G
Sbjct: 78 NRYDING---RLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDDSRLLQLFSEHG 134
Query: 152 NILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
+++ V + SG S+G+GFV +E +AIS L+G L+ + + V
Sbjct: 135 EVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRV 183
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 15/187 (8%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFG--PITSVVVMREGDGKSRCFGFVNFENPDDAARAVED 277
VYV NL + L ++F + G + V+ RE G+SR FGFV ++A +A+E
Sbjct: 18 VYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRE-TGQSRGFGFVTMSTIEEADKAIEM 76
Query: 278 LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEK 337
LN + + V RA + R +F + Y+ NL +DD +
Sbjct: 77 LNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRA----------YVGNLPWQVDDS-R 125
Query: 338 LKEIFADFGTITSCKVMRDL-NGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVAL 396
L ++F++ G + + V+ D +G S+G GFV+ S E+ A+ A++G+ + +PL V +
Sbjct: 126 LLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNV 185
Query: 397 AQRKEER 403
A + +R
Sbjct: 186 AAERPQR 192
>Os10g0151800 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 472
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
+++G L + L ++ G + VR+ +D T+ + G+A+V F+ A RA+E L
Sbjct: 111 VFIGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTFTGKDGAQRAIEDL 170
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG-NILSCKVA 159
+ G+ +R S +F+ N+ K + L + G +++ ++
Sbjct: 171 HDKEHKGRTLRCSLSQ--------AKHRLFVGNVPKGLSEDELRNIIQGKGPGVVNIEMF 222
Query: 160 TEMSGESK--GYGFVQFELEEAAQNAISKLNG--MLLNDKKVYVGPFVRK--QERENVSG 213
++ S+ G+ FV++ A A KL+ ++ ++ V K ++ S
Sbjct: 223 KDLHDPSRNRGFLFVEYYNHACADYAKQKLSAPNFKVDGSQLTVSWAEPKGSSSSDSSSA 282
Query: 214 NPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAAR 273
+ +YVKNL E+ +++ +KEIF G +T VV+ G R FGFV+F A +
Sbjct: 283 AAQVKTIYVKNLPENASKEKIKEIFEIHGEVTKVVLPPAKAGNKRDFGFVHFAERSSALK 342
Query: 274 AVE 276
AV+
Sbjct: 343 AVK 345
>Os04g0611500 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 536
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 172/416 (41%), Gaps = 81/416 (19%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
L+ +L + + L ++ SQ G V R+ D T+LS G YV FS P A RALE+
Sbjct: 4 LFFCNLPYATTEGDLVELCSQYGDVDQARIVVDKTTKLSTGRGYVLFSLPDSAVRALELD 63
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFGNILSCKVAT 160
N + G+ +R+ A + K ++ S + K + S+ L + A+
Sbjct: 64 N-SSFQGRLLRV-----------KAAKPLNNKKIESSYEEKKM----SLKQQKLDQRKAS 107
Query: 161 EMSGESKGYGFVQFELEEAAQNAISKLNGM-----------------------LLNDKKV 197
E+SG+++ + + A+N I++ NG+ ++ + K
Sbjct: 108 EISGDTRAWNSFYMRQDTVAEN-IARKNGISKSELLDREADDLAVRIALGETHVIAETKK 166
Query: 198 YV---GPFVRKQERENVSGNPKFNN----VYVKNLSESTTEDNLKEIFGKFGPITSVVVM 250
Y+ G V E N KF + VKNL S+ E++L +F K G + +++
Sbjct: 167 YLSRSGVNVAALEELASKRNEKFKRSNHVILVKNLPYSSCEEDLATMFRKHGSLDKIIL- 225
Query: 251 REGDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRA-----------QKKSER 299
+R F V F +A A + L ++ D Y+ A + E+
Sbjct: 226 ----PPTRVFALVVFVEATEARHAFKKLLYTRYKDTPLYLEWAPENILSPTSAPVEDDEK 281
Query: 300 EMELKEKFEKNIKEAA-----------DKNQGTNLYLKNLDDSIDDDEKLKEIFA---DF 345
++ K I E D+ + ++++KNL+ DE LK+ F+
Sbjct: 282 DVVGDRIVTKAIVEQTVEGVSAEEIDPDRVESRSVFVKNLNFKT-SDESLKQHFSTKLKS 340
Query: 346 GTITSCKVMRDL-NG--VSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
G++ S V + + NG VS G GFV F S E A+ + G ++ L + L
Sbjct: 341 GSLKSATVKKHIKNGKNVSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCH 396
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 167/384 (43%), Gaps = 64/384 (16%)
Query: 69 RVCRDVNTRLSLGYAYVNFSSPADAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAAN 128
R D+ R++LG +V A + L+ + +N + + S R+ ++S
Sbjct: 144 READDLAVRIALGETHV-------IAETKKYLSRSGVNVAALEELASKRNEKFKRSNHV- 195
Query: 129 IFIKNLDKSIDNKALYDTFSVFGNILSCKV-------------ATEMSGESKGYGFVQFE 175
I +KNL S + L F G++ + ATE K + +++
Sbjct: 196 ILVKNLPYSSCEEDLATMFRKHGSLDKIILPPTRVFALVVFVEATEARHAFKKLLYTRYK 255
Query: 176 -----LEEAAQNAISKLNGMLLNDKKVYVG-----PFVRKQERENVSGNP------KFNN 219
LE A +N +S + + +D+K VG + +Q E VS + +
Sbjct: 256 DTPLYLEWAPENILSPTSAPVEDDEKDVVGDRIVTKAIVEQTVEGVSAEEIDPDRVESRS 315
Query: 220 VYVKNLSESTTEDNLKEIFG---KFGPITSVVV---MREGDGKSRCFGFVNFENPDDAAR 273
V+VKNL+ T++++LK+ F K G + S V ++ G S FGFV F++ + A
Sbjct: 316 VFVKNLNFKTSDESLKQHFSTKLKSGSLKSATVKKHIKNGKNVSMGFGFVEFDSVETATS 375
Query: 274 AVEDLNGKKFDDKEWY--VCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDS 331
+DL G D +C +K + + K+K T L ++N+ +
Sbjct: 376 VCKDLQGTVLDGHALILQLCHGRKDGQTKKNEKDK------------SSTKLLVRNV--A 421
Query: 332 IDDDEK-LKEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSK 390
+ EK L+++F+ FG I S ++ G +G FV F + ++A AL A+ + +
Sbjct: 422 FEATEKDLRQLFSPFGQIKSLRLPMKF-GSHRGFAFVEFVTKQEAQNALQALASTHLYGR 480
Query: 391 PLYVALAQRK---EERRARLQAQF 411
L + A+ EE RAR AQF
Sbjct: 481 HLVIERAKEGETLEELRARTAAQF 504
>Os02g0815200 Similar to 29 kDa ribonucleoprotein, chloroplast precursor
(RNA-binding protein cp29)
Length = 316
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
LY G+L + AQL + + V V D T S G+A+V S+ D + ++ L
Sbjct: 147 LYFGNLPYNCDSAQLAGIVQDYATPEMVEVLYDRATGRSRGFAFVTMSTIEDCEQVIKNL 206
Query: 101 NFTPINGKPIRIMYSNRDPSSR----KSGAANIFIKNLDKSIDNKALYDTFSVFGNILSC 156
+ + +G+ +R+ ++++ P + +F+ NL ++ ++ L + F GN++
Sbjct: 207 DGSLYSGRTMRVNFADK-PKPKLPLYPETEHKLFVGNLSWTVTSEMLTEMFQKCGNVVGA 265
Query: 157 KVATE-MSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYV 199
+V + +G S+GYGFV + +E A+S LNG L +++ V
Sbjct: 266 RVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRV 309
>Os08g0320100 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 350
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 220 VYVKNLSESTTEDNLKEIFGKFGPITSVVVMREG-DGKSRCFGFVNFENPDDAARAVED- 277
+++ L + TT KE FGK+G I V+M++ K R FGF+ F +P R +ED
Sbjct: 17 IFIGGLPKDTTMGTFKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITFADPAVVDRVIEDN 76
Query: 278 --LNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDD 335
+NGK E+E+K K D +++ L ++ +D
Sbjct: 77 HVINGK------------------EVEIKRTIPKGAAPLKDFKT-KKIFVGGLPSALKED 117
Query: 336 EKLKEIFADFGTITSCKVMRDLN-GVSKGSGFVAFKSAEDASRALVAMNGKMI 387
E KE F+ FG + +++RD + S+G GFV F AE L+A G MI
Sbjct: 118 E-FKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVF-DAEKTVDELLAKKGNMI 168
>Os07g0158300 Similar to RNA binding protein
Length = 364
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
L+VG+L ++ ++ FS+ G V +V++ D T S G+A+V ++ +AA A++M
Sbjct: 136 LFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMF 195
Query: 101 NFTPINGKPIRIMY---------------SNRDPSSRKSGAANIFIKNLDKSIDNKALYD 145
N + G+ R+ Y + R+ + R G I+ NL + AL
Sbjct: 196 NGALLGGRTARVNYPEVPRGGERAVGSAAATRE-NRRDDGTFKIYAGNLGWGVRADALRA 254
Query: 146 TFSVFGNILSCKVATEM-SGESKGYGFVQFELEEAAQNAISKLNGMLLNDK 195
F +L +V E SG S+G+GFV F E AQ A+ L+G+ L +
Sbjct: 255 AFEGQPGLLDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGR 305
>Os07g0180800 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 650
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 23/253 (9%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEML 100
++VG L ++ + VF++ G + VR+ + + GY +V + A A +A+
Sbjct: 238 VFVGGLHRDAKEDDVRAVFAKAGEITEVRMIMNPLAGKNKGYCFVRYRHAAQAKKAIAEF 297
Query: 101 NFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG--NILSCKV 158
I GK R ++ G IF+ N++K + + G NI S +
Sbjct: 298 GNVKICGKLCR--------AAVPVGNDRIFLGNINKKWKKEDVIKQLKKIGIENIDSVTL 349
Query: 159 ATEMSGE--SKGYGFVQFELEEAAQNAISKLN-----GMLLNDKKVYVGPFVRKQERENV 211
++ + ++G+ F++ E A+ A KL+ G LN + + P E++
Sbjct: 350 KSDSNNPVCNRGFAFLELETSRDARMAYKKLSQKNAFGKGLNIRVAWAEPLNDPDEKDM- 408
Query: 212 SGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMRE-GDGKSRCFGFVNFENPDD 270
+ +++V + S LKEIF K G I SVV+ R+ K R F F+N+ +
Sbjct: 409 ----QVKSIFVDGIPTSWDHAQLKEIFKKHGKIESVVLSRDMPSAKRRDFAFINYITREA 464
Query: 271 AARAVEDLNGKKF 283
A +E + ++F
Sbjct: 465 AISCLESFDKEEF 477
>Os02g0788300 Similar to Eukaryotic translation initiation factor 3 p42
(Fragment)
Length = 289
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 8/100 (8%)
Query: 198 YVGPFVRKQERENVSGNPKFNNVYVKNLSESTTEDNLKEIFGKFGPIT-SVVVMREGDGK 256
YV P R+ E + N+V V NLSE T E++L+E+FG FGP+T + V + G+
Sbjct: 191 YVPPKPRESEMRRRNDE---NSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGE 247
Query: 257 SRCFGFVNFENPDDAARAVEDLNGKKFD----DKEWYVCR 292
SR FGF++F +DA RA+ LNG +D + EW R
Sbjct: 248 SRGFGFLSFVYREDAERAIAKLNGYGYDSLILNVEWAAPR 287
>Os02g0221500 Paraneoplastic encephalomyelitis antigen family protein
Length = 397
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 18/192 (9%)
Query: 213 GNPKFNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGK-SRCFGFVNFENPDDA 271
G ++V ++ TTE++ + F K+G IT V+M++ K R FGFV F +P
Sbjct: 61 GGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVI 120
Query: 272 ARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDS 331
+ +ED +V R +E+K + + D + +++ L S
Sbjct: 121 DKVLEDE----------HVIDG-----RTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSS 165
Query: 332 IDDDEKLKEIFADFGTITSCKVMRDLN-GVSKGSGFVAFKSAEDASRALVAMNGKMIGSK 390
+ +DE L+E F+ +G I ++M D + G S+G GFV F+S + R + + +G K
Sbjct: 166 LTEDE-LREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGK 224
Query: 391 PLYVALAQRKEE 402
+ + A+ K+
Sbjct: 225 QVEIKKAEPKKH 236
>Os02g0567900 Similar to RNA Binding Protein 47
Length = 257
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 28/175 (16%)
Query: 41 LYVGDLDVSVQDAQLFDVFSQ-VGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
++VGDL V V D L D+F++ SV +V D NT S GY +V F D A+
Sbjct: 30 IFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTE 89
Query: 100 LNFTPINGKPIRI-----------------MYSNRDPSSRKSGAANIFIKNLDKSIDNKA 142
+N + +PIRI S+ D ++R I++ LD +
Sbjct: 90 MNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTNR-----TIYVGGLDPNATEDE 144
Query: 143 LYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKV 197
L F+ +G++ S K+ K GFVQF A+ A+ LNG + + V
Sbjct: 145 LRKAFAKYGDLASVKIPV-----GKQCGFVQFVNRPDAEEALQGLNGSTIGKQAV 194
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 21/166 (12%)
Query: 128 NIFIKNLDKSIDNKALYDTFSV-FGNILSCKVATEM-SGESKGYGFVQFELEEAAQNAIS 185
+IF+ +L + ++ L D F+ + ++ KV + +G S+GYGFV+F + +A++
Sbjct: 29 SIFVGDLAVDVTDEMLMDLFAKKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMT 88
Query: 186 KLNGMLLNDKKVYVGPFV-----------RKQERENVSGNPKFNNVYVKNLSESTTEDNL 234
++NG + + + +GP ++ ++ S N +YV L + TED L
Sbjct: 89 EMNGAYCSTRPIRIGPATPRRSSGDSGSSPPRQSDSDSTN---RTIYVGGLDPNATEDEL 145
Query: 235 KEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDLNG 280
++ F K+G + SV + GK +C GFV F N DA A++ LNG
Sbjct: 146 RKAFAKYGDLASVKIPV---GK-QC-GFVQFVNRPDAEEALQGLNG 186
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,688,300
Number of extensions: 840741
Number of successful extensions: 3473
Number of sequences better than 1.0e-10: 38
Number of HSP's gapped: 3286
Number of HSP's successfully gapped: 78
Length of query: 660
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 553
Effective length of database: 11,448,903
Effective search space: 6331243359
Effective search space used: 6331243359
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 159 (65.9 bits)