FiT-DB / Search/ Help/ Sample detail

Os09g0462700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RNA Binding Protein 47.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0273) R2 : 0.572
β1 : -1.94 (0.1) R2dD : 0.367 R2D : 0.133
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.09 (0.0583) R2dN8 : 0.439 R2N8 : 0.206
σ : 0.513
deviance : 120.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.7 0.476 10.1 -1.8 0.0144 0.321 -0.836 2.14 -1.09 11.4 36.11 748 -- --
108.39 0.485 10.1 -1.94 0.0367 0.404 1.02 -- -1.14 22.2 35.02 614 -- --
105.22 0.478 10.1 -1.81 0.0272 0.317 -- 2.32 -1.1 10.6 35.23 800 -- --
112.69 0.494 10.1 -1.96 0.0311 0.447 -- -- -1.13 22.1 39.95 611 -- --
105.24 0.478 10.1 -1.82 -- 0.313 -- 2.39 -1.1 -- 36.08 800 -- --
112.54 0.497 10.1 -1.9 0.182 -- 1.43 -- -1.09 20 -- -- -- --
117.91 0.508 10.1 -1.94 0.219 -- -- -- -1.09 18 -- -- -- --
112.73 0.495 10.1 -1.96 -- 0.457 -- -- -1.13 -- 40 614 -- --
157.03 0.584 10.1 -- 0.0968 0.996 -- -- -0.842 23.2 57.5 47520 -- --
120.39 0.513 10.1 -1.94 -- -- -- -- -1.09 -- -- -- -- --
216.64 0.689 10 -- 0.249 -- -- -- -0.87 17.6 -- -- -- --
136.65 0.544 9.93 -- -- 1.51 -- -- -0.498 -- 58.1 47520 -- --
219.85 0.692 10 -- -- -- -- -- -0.875 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.48 temperature 20.0 270 > th dose independent rect. 5 1
2 90.87 temperature 20.0 270 > th dose independent rect. 3 5
3 91.54 temperature 20.0 90 > th dose independent rect. 5 4
10 93.51 temperature 10.0 270 > th dose dependent rect. 5 1
12 93.69 temperature 30.0 90 < th dose independent rect. 9 20
17 94.01 atmosphere 1010.0 90 < th dose independent rect. 5 4
18 94.01 atmosphere 1015.0 90 < th dose dependent rect. 5 4
19 94.08 humidity 70.0 270 > th dose independent rect. 3 5
20 94.09 humidity 80.0 270 > th dose independent rect. 5 1
21 94.15 humidity 60.0 270 > th dose dependent rect. 5 1
25 94.30 radiation 30.0 270 < th dose independent rect. 3 5
26 94.32 radiation 20.0 270 < th dose dependent rect. 5 1
27 94.32 temperature 10.0 270 > th dose dependent rect. 3 5
28 94.36 humidity 50.0 270 > th dose dependent rect. 3 5
29 94.40 radiation 40.0 90 < th dose independent rect. 5 4
31 94.44 radiation 10.0 270 < th dose independent rect. 5 1
32 94.47 humidity 80.0 270 > th dose independent rect. 4 3
34 94.47 temperature 10.0 270 > th dose dependent rect. 4 3
36 94.51 atmosphere 1010.0 270 < th dose independent rect. 3 5
37 94.51 humidity 60.0 270 > th dose dependent rect. 4 3
39 94.55 atmosphere 995.0 90 > th dose independent rect. 9 20
40 94.56 humidity 60.0 90 > th dose independent rect. 5 4
48 94.68 radiation 40.0 270 < th dose dependent rect. 3 5
49 94.69 atmosphere 1015.0 270 < th dose dependent rect. 3 5
52 94.74 wind 9.0 90 < th dose independent rect. 5 4
53 94.74 temperature 10.0 90 > th dose independent rect. 5 4
56 94.74 atmosphere 995.0 90 > th dose independent rect. 5 4
58 94.74 temperature 10.0 90 > th dose independent rect. 9 20
59 94.76 wind 7.0 270 < th dose independent rect. 5 1
61 94.76 temperature 10.0 270 > th dose independent rect. 5 1
63 94.76 temperature 30.0 270 < th dose independent rect. 5 1
64 94.76 humidity 50.0 270 > th dose independent rect. 5 1
67 94.76 atmosphere 995.0 270 > th dose independent rect. 5 1
68 94.76 atmosphere 1015.0 270 < th dose independent rect. 5 1
72 94.76 temperature 10.0 270 > th dose independent rect. 6 23
73 94.82 precipitation 0.1 90 < th dose independent rect. 5 4
74 94.82 precipitation 0.1 90 < th dose dependent rect. 5 4
78 94.90 atmosphere 1015.0 270 < th dose dependent rect. 5 1
81 94.94 precipitation 0.1 270 < th dose independent rect. 5 1
82 94.94 wind 9.0 270 < th dose independent rect. 3 5
83 94.94 temperature 10.0 270 > th dose independent rect. 3 5
85 94.94 temperature 30.0 270 < th dose independent rect. 3 5
86 94.94 humidity 50.0 270 > th dose independent rect. 3 5
88 94.94 atmosphere 995.0 270 > th dose independent rect. 3 5
91 94.94 precipitation 0.1 270 < th dose dependent rect. 5 1
95 95.03 temperature 30.0 90 < th dose independent rect. 5 4
96 95.03 temperature 10.0 90 > th dose dependent rect. 21 8
99 95.06 temperature 15.0 10 > th dose independent rect. 10 19
102 95.09 temperature 10.0 270 > th dose dependent rect. 19 8
103 95.10 radiation 40.0 270 < th dose dependent rect. 4 3
110 95.17 atmosphere 995.0 270 > th dose independent rect. 7 21
122 95.22 temperature 10.0 270 > th dose independent rect. 7 21
125 95.25 precipitation 0.1 90 < th dose independent rect. 9 20
127 95.25 precipitation 0.1 90 < th dose dependent rect. 9 20
135 95.36 precipitation 0.1 270 < th dose independent rect. 3 5
136 95.36 precipitation 0.1 270 < th dose dependent rect. 3 5
138 95.38 temperature 10.0 10 > th dose dependent rect. 5 5
140 95.40 precipitation 0.1 270 < th dose independent rect. 6 23
141 95.40 precipitation 0.1 270 < th dose dependent rect. 6 23
148 95.45 temperature 30.0 270 < th dose independent rect. 8 7
156 95.54 humidity 50.0 270 > th dose independent rect. 8 19
158 95.56 wind 9.0 90 < th dose independent rect. 9 20
159 95.56 precipitation 0.1 270 < th dose independent rect. 7 21
162 95.56 precipitation 0.1 270 < th dose dependent rect. 7 21
172 95.63 radiation 40.0 270 < th dose independent rect. 2 7
179 95.70 radiation 40.0 90 < th dose dependent rect. 5 5
201 95.85 temperature 30.0 270 < th dose independent rect. 21 17
207 95.91 radiation 40.0 10 < th dose independent rect. 5 5
208 95.92 temperature 15.0 90 > th dose independent rect. 21 8
209 95.92 wind 1.0 270 > th dose independent rect. 7 21
212 95.94 atmosphere 1015.0 90 < th dose dependent rect. 5 16
215 95.95 atmosphere 1015.0 90 < th dose independent rect. 9 20
225 96.04 wind 9.0 90 < th dose dependent rect. 5 4
241 96.15 temperature 10.0 1440 > th dose independent rect. 6 5
244 96.15 atmosphere 995.0 1440 > th dose independent rect. 6 5
245 96.15 temperature 10.0 1440 > th dose independent rect. 11 19
256 96.25 wind 1.0 270 > th dose independent rect. 8 19
259 96.26 wind 9.0 270 < th dose independent rect. 7 21
261 96.26 atmosphere 1015.0 10 < th dose dependent rect. 5 5
263 96.29 humidity 50.0 270 > th dose independent rect. 7 21
268 96.34 wind 1.0 10 > th dose independent rect. 5 5
270 96.34 wind 9.0 270 < th dose dependent rect. 5 1
294 96.47 wind 9.0 10 < th dose independent rect. 5 5
295 96.47 temperature 10.0 10 > th dose independent rect. 5 5
298 96.47 atmosphere 995.0 10 > th dose independent rect. 5 5
299 96.47 atmosphere 1015.0 10 < th dose independent rect. 5 5
308 96.51 temperature 15.0 270 > th dose independent rect. 19 8
317 96.59 precipitation 0.1 10 < th dose independent rect. 10 19
319 96.59 precipitation 0.1 10 < th dose dependent rect. 10 19
354 96.84 humidity 50.0 270 > th dose independent rect. 9 17
402 97.05 atmosphere 995.0 270 > th dose independent rect. 6 23
409 97.08 atmosphere 1015.0 270 < th dose dependent rect. 3 16
425 97.18 humidity 50.0 1440 > th dose independent rect. 6 5
484 97.34 temperature 15.0 90 > th dose independent rect. 5 16
494 97.42 wind 9.0 90 < th dose independent rect. 5 16
520 97.57 wind 1.0 90 > th dose independent rect. 5 4
529 97.60 atmosphere 995.0 90 > th dose dependent rect. 9 20
533 97.65 atmosphere 1000.0 270 > th dose independent rect. 7 8
546 97.67 radiation 1.0 90 > th dose independent rect. 17 16
561 97.72 atmosphere 1015.0 1440 < th dose independent rect. 6 4
586 97.89 wind 1.0 270 > th dose independent rect. 13 8
587 97.89 wind 9.0 270 < th dose dependent rect. 3 5
589 97.91 wind 9.0 270 < th dose independent rect. 13 8
591 97.92 wind 9.0 270 < th dose independent rect. 3 16
599 97.99 radiation 1.0 90 > th dose independent sin 11 NA
604 98.00 radiation 1.0 90 < th dose dependent rect. 21 8
606 98.02 wind 1.0 270 > th dose independent rect. 5 1
609 98.04 precipitation 0.1 270 < th dose independent rect. 21 16
613 98.04 precipitation 0.1 270 < th dose dependent rect. 21 16
614 98.05 atmosphere 1000.0 90 > th dose independent rect. 9 7
627 98.10 wind 9.0 270 < th dose independent rect. 6 23
633 98.13 radiation 1.0 90 < th dose independent rect. 21 8
646 98.16 temperature 30.0 90 < th dose independent rect. 21 8
647 98.16 humidity 50.0 90 > th dose independent rect. 21 8
650 98.16 atmosphere 995.0 90 > th dose independent rect. 21 8
655 98.16 atmosphere 1015.0 90 < th dose independent rect. 5 16
661 98.18 atmosphere 995.0 90 > th dose dependent rect. 9 7
673 98.23 wind 9.0 90 < th dose independent rect. 21 8
680 98.26 wind 9.0 90 < th dose dependent rect. 9 20
682 98.27 radiation 1.0 90 > th dose independent rect. 4 5
692 98.28 precipitation 0.1 90 < th dose independent rect. 21 8
693 98.28 precipitation 0.1 90 < th dose dependent rect. 21 8
720 98.37 temperature 10.0 90 > th dose dependent rect. 5 16
721 98.38 temperature 10.0 270 > th dose independent rect. 13 8
722 98.38 temperature 15.0 270 > th dose independent rect. 3 16
723 98.38 temperature 10.0 270 > th dose independent rect. 21 16
724 98.38 atmosphere 995.0 270 > th dose independent rect. 21 16
727 98.39 precipitation 0.1 270 < th dose independent rect. 13 8
730 98.39 precipitation 0.1 270 < th dose dependent rect. 13 8
753 98.51 atmosphere 1015.0 90 < th dose independent rect. 21 8
759 98.54 precipitation 0.1 90 < th dose independent rect. 5 16
761 98.54 precipitation 0.1 90 < th dose dependent rect. 5 16
762 98.56 radiation 1.0 10 > th dose independent rect. 5 5
774 98.57 atmosphere 995.0 270 > th dose dependent rect. 7 8
806 98.67 humidity 50.0 270 > th dose independent rect. 21 16
835 98.72 radiation 20.0 90 < th dose independent rect. 5 16
840 98.74 radiation 1.0 10 > th dose independent rect. 17 17
862 98.81 wind 9.0 1440 < th dose independent rect. 6 3
866 98.81 humidity 50.0 1440 > th dose independent rect. 6 3
876 98.84 wind 1.0 270 > th dose independent rect. 19 9
881 98.86 wind 9.0 270 < th dose independent rect. 21 16
883 98.87 temperature 10.0 1440 > th dose independent rect. 22 8
886 98.87 temperature 30.0 1440 < th dose independent rect. 22 8
890 98.87 humidity 50.0 1440 > th dose independent rect. 22 8
897 98.87 atmosphere 995.0 1440 > th dose independent rect. 22 8
898 98.87 radiation 20.0 1440 < th dose independent rect. 22 8
907 98.87 temperature 10.0 1440 > th dose independent rect. 6 16
912 98.88 wind 9.0 270 < th dose independent rect. 15 16
919 98.90 atmosphere 1015.0 270 < th dose independent rect. 13 8
932 98.95 wind 1.0 270 > th dose independent rect. 21 16
955 98.96 atmosphere 1015.0 270 < th dose independent rect. 3 16
970 98.99 wind 9.0 1440 < th dose independent rect. 23 7
971 98.99 atmosphere 1015.0 270 < th dose independent rect. 22 15