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Os12g0136200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0169) R2 : 0.102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.256 (0.0357) R2dN8 : 0.131 R2N8 : 0.102
σ : 0.319
deviance : 46.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.5 0.242 10.6 0.139 0.582 0.0412 0.695 0.646 0.273 4.05 20.61 11 -- --
28.07 0.247 10.7 -0.00331 0.579 0.0677 0.344 -- 0.218 4.15 24 41 -- --
27.61 0.247 10.7 0.0986 0.579 0.0157 -- 0.468 0.265 4.05 20.6 13 -- --
28.35 0.248 10.7 -0.0203 0.597 0.0789 -- -- 0.208 3.98 23.97 19 -- --
45 0.312 10.7 0.129 -- -0.145 -- 0.306 0.301 -- 20.2 4 -- --
28.45 0.25 10.7 0.0151 0.572 -- 0.355 -- 0.247 4.14 -- -- -- --
28.81 0.251 10.7 0.0111 0.573 -- -- -- 0.245 4.07 -- -- -- --
35.69 0.278 10.7 0.116 -- -0.429 -- -- 0.312 -- 28.11 235 -- --
28.36 0.248 10.7 -- 0.595 0.0766 -- -- 0.212 3.98 23.9 19 -- --
46.67 0.319 10.7 0.0344 -- -- -- -- 0.26 -- -- -- -- --
28.81 0.251 10.7 -- 0.573 -- -- -- 0.243 4.07 -- -- -- --
35.96 0.279 10.7 -- -- -0.443 -- -- 0.292 -- 28.42 241 -- --
46.7 0.319 10.7 -- -- -- -- -- 0.256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.09 humidity 80.0 720 < th dose dependent rect. 18 13
11 25.31 humidity 90.0 4320 < th dose independent rect. 6 2
13 25.38 atmosphere 1015.0 270 < th dose dependent rect. 9 8
21 25.49 wind 1.0 10 > th dose dependent rect. 4 1
29 25.56 humidity 90.0 4320 > th dose independent rect. 6 2
33 25.58 wind 5.0 270 < th dose independent rect. 14 8
40 25.61 humidity 80.0 720 < th dose dependent rect. 18 1
52 25.64 humidity 90.0 720 < th dose dependent rect. 20 1
60 25.67 atmosphere 995.0 10 > th dose dependent rect. 5 18
64 25.69 wind 7.0 270 < th dose independent rect. 17 16
69 25.71 temperature 20.0 90 > th dose independent rect. 4 1
70 25.72 atmosphere 1005.0 270 > th dose independent rect. 3 18
77 25.74 humidity 80.0 720 < th dose dependent sin 12 NA
82 25.76 atmosphere 995.0 10 > th dose dependent rect. 7 16
83 25.77 humidity 70.0 720 > th dose independent rect. 18 9
88 25.79 temperature 20.0 10 > th dose independent rect. 2 4
93 25.82 temperature 15.0 270 > th dose independent rect. 17 16
96 25.82 atmosphere 1015.0 10 < th dose dependent rect. 10 8
98 25.83 wind 1.0 90 > th dose independent rect. 23 7
106 25.86 radiation 20.0 270 < th dose independent rect. 17 16
110 25.87 temperature 20.0 270 > th dose independent rect. 9 8
113 25.88 humidity 70.0 720 > th dose independent rect. 19 1
116 25.88 atmosphere 1005.0 10 > th dose independent rect. 5 18
132 25.91 humidity 90.0 30 < th dose independent rect. 18 16
135 25.91 atmosphere 1015.0 10 < th dose dependent rect. 10 10
142 25.92 temperature 20.0 90 > th dose independent rect. 1 5
143 25.92 humidity 50.0 720 > th dose dependent rect. 17 10
147 25.93 precipitation 0.1 4320 > th dose independent rect. 7 1
151 25.93 precipitation 0.1 4320 > th dose dependent rect. 7 1
155 25.94 temperature 25.0 90 > th dose dependent rect. 4 1
163 25.96 temperature 30.0 270 < th dose independent rect. 3 18
171 25.97 precipitation 0.1 4320 < th dose independent rect. 7 1
172 25.97 humidity 90.0 270 < th dose independent rect. 9 8
175 25.97 precipitation 0.1 4320 < th dose dependent rect. 7 1
183 25.99 humidity 90.0 10 < th dose independent rect. 4 1
188 25.99 humidity 90.0 30 < th dose independent rect. 20 14
190 25.99 humidity 70.0 720 > th dose dependent rect. 19 1
194 26.01 humidity 70.0 720 < th dose independent sin 13 NA
196 26.01 wind 1.0 270 > th dose independent rect. 9 8
208 26.02 radiation 40.0 270 < th dose dependent rect. 17 16
209 26.03 humidity 70.0 720 > th dose independent sin 13 NA
221 26.04 humidity 80.0 720 > th dose independent rect. 16 13
233 26.05 humidity 90.0 4320 > th dose dependent rect. 8 1
248 26.07 humidity 80.0 720 > th dose independent rect. 18 4
249 26.07 wind 1.0 90 > th dose independent rect. 1 16
250 26.07 wind 9.0 270 < th dose dependent rect. 14 8
274 26.10 humidity 90.0 30 < th dose independent rect. 18 10
280 26.10 temperature 20.0 10 > th dose independent rect. 5 18
297 26.12 temperature 30.0 270 < th dose independent rect. 3 8
298 26.12 temperature 30.0 270 < th dose independent rect. 3 10
311 26.12 temperature 10.0 270 > th dose dependent rect. 8 9
313 26.12 atmosphere 1015.0 10 < th dose dependent rect. 1 17
314 26.13 humidity 70.0 720 < th dose independent rect. 17 3
327 26.13 humidity 70.0 720 < th dose independent rect. 14 17
341 26.14 humidity 70.0 720 < th dose independent rect. 14 6
355 26.14 temperature 30.0 270 < th dose independent rect. 3 12
364 26.14 precipitation 0.1 270 < th dose independent rect. 17 16
368 26.14 precipitation 0.1 270 < th dose dependent rect. 17 16
379 26.15 humidity 90.0 30 < th dose independent rect. 18 8
391 26.15 radiation 40.0 270 < th dose independent rect. 3 19
392 26.15 temperature 10.0 270 > th dose dependent rect. 9 7
407 26.16 temperature 30.0 270 < th dose independent rect. 1 21
414 26.16 humidity 50.0 720 > th dose dependent rect. 16 13
425 26.17 radiation 10.0 10 < th dose dependent rect. 23 9
429 26.17 radiation 1.0 90 < th dose dependent rect. 23 17
433 26.18 temperature 15.0 270 > th dose independent rect. 16 6
437 26.18 radiation 40.0 270 < th dose independent rect. 3 8
450 26.18 radiation 10.0 720 < th dose dependent rect. 16 11
456 26.19 temperature 15.0 270 > th dose independent rect. 14 9
459 26.19 wind 7.0 270 < th dose independent rect. 4 17
463 26.19 humidity 80.0 720 > th dose independent rect. 12 19
485 26.20 atmosphere 1015.0 270 < th dose independent rect. 17 16
486 26.20 humidity 80.0 720 > th dose independent rect. 12 17
492 26.20 humidity 80.0 4320 > th dose dependent rect. 6 6
504 26.21 humidity 80.0 720 < th dose independent rect. 20 1
507 26.21 precipitation 0.1 270 < th dose independent rect. 9 8
519 26.21 temperature 10.0 270 > th dose dependent rect. 17 5
522 26.21 precipitation 0.1 270 < th dose dependent rect. 9 8
536 26.22 atmosphere 1005.0 10 < th dose independent rect. 12 19
550 26.23 humidity 90.0 30 > th dose independent rect. 4 1
555 26.23 atmosphere 1010.0 270 < th dose independent rect. 16 6
557 26.23 atmosphere 1010.0 10 < th dose independent rect. 18 7
559 26.23 atmosphere 1015.0 270 < th dose independent rect. 9 8
565 26.23 temperature 20.0 10 > th dose independent rect. 1 17
567 26.23 atmosphere 1005.0 270 < th dose independent rect. 22 19
569 26.23 atmosphere 1005.0 10 > th dose independent rect. 5 20
571 26.23 temperature 20.0 10 > th dose dependent rect. 2 4
584 26.24 atmosphere 995.0 10 > th dose independent rect. 7 16
586 26.24 radiation 40.0 30 < th dose independent rect. 7 16
587 26.24 radiation 1.0 90 < th dose independent rect. 23 17
607 26.25 humidity 90.0 270 < th dose independent rect. 17 6
619 26.25 radiation 1.0 90 < th dose dependent rect. 23 9
624 26.25 radiation 1.0 90 < th dose dependent rect. 23 14
632 26.26 temperature 30.0 720 < th dose independent rect. 18 9
650 26.26 temperature 10.0 90 > th dose dependent rect. 24 17
653 26.27 radiation 1.0 720 > th dose independent rect. 18 1
685 26.27 temperature 10.0 270 > th dose dependent rect. 16 7
707 26.28 wind 7.0 270 < th dose independent rect. 3 19
709 26.28 wind 3.0 10 < th dose dependent rect. 4 1
722 26.29 radiation 1.0 90 < th dose independent rect. 23 8
723 26.29 radiation 40.0 270 < th dose independent rect. 3 10
744 26.30 temperature 25.0 30 < th dose independent rect. 4 1
756 26.30 humidity 90.0 30 < th dose independent rect. 20 8
765 26.30 radiation 1.0 90 < th dose independent rect. 23 14
784 26.31 humidity 90.0 30 < th dose independent sin 10 NA
786 26.31 humidity 90.0 30 < th dose independent rect. 20 4
812 26.31 atmosphere 1010.0 30 < th dose dependent rect. 4 1
820 26.31 radiation 10.0 720 < th dose dependent rect. 14 15
824 26.32 temperature 30.0 720 < th dose independent rect. 18 1
825 26.32 humidity 90.0 30 > th dose independent rect. 23 5
826 26.32 wind 9.0 270 < th dose independent rect. 9 8
842 26.32 radiation 10.0 10 < th dose dependent rect. 23 13
846 26.33 radiation 1.0 1440 > th dose independent rect. 8 3
850 26.33 atmosphere 1005.0 270 < th dose independent rect. 11 6
857 26.33 humidity 50.0 270 > th dose independent rect. 17 16
858 26.33 atmosphere 995.0 270 > th dose independent rect. 17 16
868 26.33 humidity 50.0 720 > th dose dependent sin 14 NA
881 26.34 radiation 40.0 4320 > th dose independent rect. 15 1
889 26.34 temperature 30.0 270 > th dose independent rect. 9 7
910 26.34 temperature 30.0 720 > th dose dependent rect. 18 1
947 26.35 humidity 80.0 270 > th dose independent rect. 21 8
972 26.35 atmosphere 1005.0 270 > th dose independent rect. 14 19
975 26.35 atmosphere 1005.0 270 > th dose independent rect. 13 21
994 26.36 wind 7.0 1440 < th dose independent rect. 5 1
996 26.36 temperature 10.0 1440 > th dose independent rect. 5 1
999 26.36 temperature 30.0 1440 < th dose independent rect. 5 1