Os09g0565200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nucleic acid-binding protein precursor.
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Os09g0565200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nucleic acid-binding protein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.38 | 0.323 | 15 | 0.327 | 1.39 | 0.605 | -0.00869 | -0.359 | -0.202 | 18.4 | 25.1 | 10 | -- | -- |
| 47.55 | 0.321 | 15 | 0.292 | 1.39 | 0.652 | -0.0088 | -- | -0.208 | 18.4 | 25.02 | 2 | -- | -- |
| 47.34 | 0.323 | 15 | 0.326 | 1.39 | 0.605 | -- | -0.352 | -0.202 | 18.4 | 25.1 | 10 | -- | -- |
| 47.27 | 0.32 | 15 | 0.285 | 1.37 | 0.68 | -- | -- | -0.246 | 18.5 | 23.11 | 2 | -- | -- |
| 145.33 | 0.561 | 14.9 | 0.252 | -- | 0.642 | -- | -0.304 | -0.258 | -- | 23.13 | 2 | -- | -- |
| 53.57 | 0.343 | 15 | 0.126 | 1.37 | -- | -0.0397 | -- | -0.338 | 18.7 | -- | -- | -- | -- |
| 53.58 | 0.343 | 15 | 0.127 | 1.37 | -- | -- | -- | -0.338 | 18.7 | -- | -- | -- | -- |
| 145.37 | 0.564 | 14.9 | 0.227 | -- | 0.661 | -- | -- | -0.279 | -- | 23.1 | 2 | -- | -- |
| 49.02 | 0.326 | 15 | -- | 1.37 | 0.674 | -- | -- | -0.289 | 18.5 | 22.4 | 5 | -- | -- |
| 151.44 | 0.575 | 15 | 0.0959 | -- | -- | -- | -- | -0.365 | -- | -- | -- | -- | -- |
| 54 | 0.344 | 15 | -- | 1.37 | -- | -- | -- | -0.352 | 18.7 | -- | -- | -- | -- |
| 146.63 | 0.566 | 14.9 | -- | -- | 0.581 | -- | -- | -0.313 | -- | 23.1 | 2 | -- | -- |
| 151.69 | 0.575 | 15 | -- | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.43 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 2 | 34.74 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 3 | 34.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 5 | 35.21 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 23 | 36.81 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 61 | 37.92 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 64 | 37.99 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 69 | 38.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 17 | 15 |
| 71 | 38.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 72 | 38.22 | temperature | 20.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 84 | 38.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 86 | 38.44 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 90 | 38.48 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 95 | 38.52 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 97 | 38.54 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 99 | 38.56 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 100 | 38.56 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 102 | 38.56 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 104 | 38.60 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 105 | 38.60 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 110 | 38.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 112 | 38.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 113 | 38.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 116 | 38.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 121 | 38.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 123 | 38.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 133 | 38.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 161 | 38.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 162 | 38.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 163 | 38.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 166 | 38.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 170 | 38.87 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 171 | 38.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 172 | 38.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 174 | 38.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 175 | 38.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 177 | 38.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 178 | 38.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 180 | 38.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 185 | 38.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 199 | 39.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 201 | 39.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 220 | 39.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 224 | 39.28 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 225 | 39.29 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 229 | 39.34 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 249 | 39.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 252 | 39.47 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 265 | 39.52 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 270 | 39.54 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 296 | 39.61 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 299 | 39.62 | radiation | 30.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 343 | 39.74 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 20 |
| 344 | 39.74 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 20 |
| 351 | 39.76 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 352 | 39.76 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 353 | 39.76 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 356 | 39.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 357 | 39.76 | radiation | 1.0 | 270 | < th | dose independent | rect. | 20 | 6 |
| 364 | 39.76 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 366 | 39.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 371 | 39.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 6 |
| 375 | 39.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 6 |
| 388 | 39.82 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 406 | 39.86 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 417 | 39.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 418 | 39.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 453 | 39.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 456 | 39.94 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 460 | 39.94 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 463 | 39.94 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 465 | 39.94 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 471 | 39.94 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 475 | 39.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 476 | 39.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 480 | 39.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 483 | 39.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 488 | 39.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 4 |
| 492 | 39.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 8 |
| 494 | 39.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 495 | 39.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 510 | 40.00 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 511 | 40.00 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 512 | 40.00 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 520 | 40.01 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 530 | 40.03 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 567 | 40.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 579 | 40.10 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 592 | 40.13 | wind | 1.0 | 270 | > th | dose independent | rect. | 20 | 6 |
| 598 | 40.14 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 599 | 40.14 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 615 | 40.19 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 622 | 40.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 666 | 40.25 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 670 | 40.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 671 | 40.27 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 672 | 40.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 673 | 40.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 674 | 40.27 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 8 |
| 684 | 40.27 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 691 | 40.28 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 17 |
| 709 | 40.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 712 | 40.33 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 17 |
| 715 | 40.33 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 720 | 40.34 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 19 | 13 |
| 736 | 40.35 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 737 | 40.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 18 |
| 745 | 40.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 18 |
| 756 | 40.36 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 776 | 40.40 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 784 | 40.42 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 18 |
| 785 | 40.43 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 787 | 40.43 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 790 | 40.43 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 792 | 40.43 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 793 | 40.43 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 798 | 40.43 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 828 | 40.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 831 | 40.52 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 835 | 40.52 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 844 | 40.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 845 | 40.52 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 858 | 40.52 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 864 | 40.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 867 | 40.55 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 898 | 40.58 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 905 | 40.60 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 907 | 40.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 981 | 40.72 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 982 | 40.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 983 | 40.72 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 986 | 40.72 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 987 | 40.72 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 4 |
| 992 | 40.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 4 |
| 995 | 40.72 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 4 |
| 1000 | 40.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 4 |