Os10g0457000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RNA-binding region RNP-1 (RNA recognition motif) domain containing protein.
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Os10g0457000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RNA-binding region RNP-1 (RNA recognition motif) domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.52 | 0.292 | 11 | 1.07 | 0.839 | 0.672 | 0.234 | -1.18 | 0.146 | 17.9 | 79.21 | 1296 | -- | -- |
| 39.67 | 0.293 | 11 | 0.99 | 0.824 | 0.652 | 0.158 | -- | 0.117 | 17.9 | 78 | 1285 | -- | -- |
| 38.45 | 0.289 | 11 | 1.08 | 0.84 | 0.686 | -- | -1.16 | 0.137 | 17.9 | 79 | 1271 | -- | -- |
| 39.73 | 0.294 | 11 | 0.986 | 0.835 | 0.625 | -- | -- | 0.118 | 17.9 | 78 | 1285 | -- | -- |
| 74.29 | 0.401 | 11 | 1.1 | -- | 0.909 | -- | -1.24 | 0.144 | -- | 78 | 1285 | -- | -- |
| 44.72 | 0.314 | 11 | 0.954 | 0.878 | -- | 0.179 | -- | 0.0862 | 17.6 | -- | -- | -- | -- |
| 44.8 | 0.313 | 11 | 0.953 | 0.879 | -- | -- | -- | 0.087 | 17.6 | -- | -- | -- | -- |
| 75.4 | 0.404 | 11 | 0.971 | -- | 0.842 | -- | -- | 0.108 | -- | 78.23 | 1303 | -- | -- |
| 64.81 | 0.375 | 11 | -- | 0.83 | 0.56 | -- | -- | 0.0126 | 17.7 | 79.02 | 1355 | -- | -- |
| 84.96 | 0.431 | 11 | 0.925 | -- | -- | -- | -- | 0.0658 | -- | -- | -- | -- | -- |
| 68.73 | 0.388 | 11 | -- | 0.864 | -- | -- | -- | -0.0192 | 17.6 | -- | -- | -- | -- |
| 98.9 | 0.465 | 11 | -- | -- | -0.276 | -- | -- | -0.0403 | -- | 79.02 | 1355 | -- | -- |
| 107.51 | 0.484 | 11 | -- | -- | -- | -- | -- | -0.0368 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.88 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 3 | 37.18 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 4 | 37.20 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 5 | 37.21 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 7 | 37.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 8 | 37.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 11 | 37.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 14 | 37.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 15 | 37.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 19 | 37.51 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 20 | 37.51 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 24 | 37.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 27 | 37.54 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 30 | 37.56 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 40 | 37.62 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 55 | 37.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 66 | 37.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 68 | 37.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 80 | 37.82 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 93 | 37.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 94 | 37.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 105 | 37.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 110 | 37.90 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 111 | 37.90 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 118 | 37.92 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 123 | 37.93 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 124 | 37.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 128 | 37.95 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 133 | 37.96 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 141 | 37.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 144 | 37.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 147 | 37.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 150 | 37.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 153 | 37.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 154 | 37.98 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 156 | 37.98 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 164 | 37.99 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 176 | 38.00 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 177 | 38.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 188 | 38.02 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 194 | 38.03 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 197 | 38.03 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 198 | 38.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 16 |
| 201 | 38.04 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 216 | 38.07 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 223 | 38.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 224 | 38.08 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 245 | 38.10 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 247 | 38.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 248 | 38.11 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 252 | 38.11 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 256 | 38.12 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 259 | 38.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 260 | 38.13 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 262 | 38.13 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 269 | 38.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 272 | 38.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 275 | 38.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 277 | 38.14 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 281 | 38.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 302 | 38.17 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 306 | 38.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 314 | 38.18 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 315 | 38.18 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 336 | 38.20 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 368 | 38.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 370 | 38.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 376 | 38.23 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 390 | 38.24 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 393 | 38.25 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 399 | 38.26 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 400 | 38.26 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 410 | 38.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 411 | 38.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 412 | 38.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 415 | 38.27 | wind | 7.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 428 | 38.28 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 446 | 38.29 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 456 | 38.30 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 458 | 38.30 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 5 |
| 465 | 38.30 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 480 | 38.32 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 491 | 38.32 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 514 | 38.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 524 | 38.36 | temperature | 15.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 536 | 38.37 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 560 | 38.38 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 565 | 38.39 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 13 |
| 573 | 38.40 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 582 | 38.40 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 590 | 38.41 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 612 | 38.43 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 652 | 38.46 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 687 | 38.47 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 723 | 38.48 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 725 | 38.49 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 726 | 38.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 752 | 38.50 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 5 |
| 757 | 38.50 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 768 | 38.50 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 773 | 38.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 775 | 38.51 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 791 | 38.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 794 | 38.52 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 16 |
| 804 | 38.52 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 828 | 38.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 848 | 38.55 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 857 | 38.55 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 866 | 38.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 874 | 38.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 881 | 38.57 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 900 | 38.58 | wind | 9.0 | 10 | < th | dose independent | rect. | 8 | 19 |
| 901 | 38.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 904 | 38.58 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 913 | 38.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 949 | 38.61 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |