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Os02g0567900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RNA Binding Protein 47.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0286) R2 : 0.0064
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.103 (0.0603) R2dN8 : 0.00826 R2N8 : 0.0064
σ : 0.539
deviance : 133.56
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.13 0.465 12 0.155 0.534 1.04 1.53 2.29 -0.127 20.5 15.9 106 -- --
104.11 0.475 12 0.177 0.517 0.774 1.04 -- -0.118 19.6 12 122 -- --
104.23 0.475 12 0.134 0.504 0.899 -- 1.68 -0.112 19.6 19.07 114 -- --
107.16 0.482 12 0.124 0.522 0.826 -- -- -0.12 20.4 7.607 122 -- --
116.77 0.503 12 0.124 -- 0.802 -- 1.49 -0.119 -- 19.99 161 -- --
114.04 0.501 12 0.151 0.544 -- 1.16 -- -0.0809 17.7 -- -- -- --
117.25 0.507 12 0.146 0.552 -- -- -- -0.0756 17.4 -- -- -- --
120.02 0.51 12 0.137 -- 0.687 -- -- -0.118 -- 15.16 162 -- --
107.64 0.483 12 -- 0.527 0.84 -- -- -0.135 20.4 7.682 122 -- --
133.13 0.539 12 0.127 -- -- -- -- -0.0892 -- -- -- -- --
117.81 0.508 12 -- 0.55 -- -- -- -0.0918 17.4 -- -- -- --
120.5 0.511 12 -- -- 0.67 -- -- -0.133 -- 14.89 170 -- --
133.56 0.539 12 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.46 radiation 40.0 90 < th dose independent rect. 4 15
2 91.54 temperature 10.0 270 > th dose dependent rect. 7 6
8 92.35 temperature 15.0 270 > th dose dependent rect. 8 3
10 92.75 temperature 15.0 10 > th dose dependent rect. 9 6
14 92.90 temperature 15.0 270 > th dose dependent rect. 9 1
22 93.13 wind 5.0 270 < th dose independent rect. 2 5
37 93.54 wind 5.0 270 < th dose independent rect. 3 3
41 93.67 radiation 30.0 90 < th dose independent rect. 3 6
45 93.74 radiation 40.0 90 < th dose dependent rect. 4 15
51 94.02 temperature 30.0 90 < th dose independent rect. 3 6
58 94.23 radiation 30.0 90 < th dose independent rect. 13 20
59 94.24 precipitation 0.1 270 < th dose independent rect. 2 5
61 94.24 precipitation 0.1 270 < th dose dependent rect. 2 5
62 94.25 radiation 40.0 270 < th dose independent rect. 11 20
64 94.31 precipitation 0.1 270 < th dose independent rect. 3 3
65 94.31 precipitation 0.1 270 < th dose dependent rect. 3 3
66 94.32 wind 9.0 270 < th dose independent rect. 7 19
74 94.45 wind 9.0 270 < th dose independent rect. 6 21
79 94.59 wind 9.0 90 < th dose independent rect. 9 18
81 94.61 radiation 1.0 270 > th dose dependent rect. 8 3
88 94.72 radiation 30.0 90 < th dose independent rect. 15 18
90 94.79 radiation 30.0 270 < th dose dependent rect. 2 6
92 94.80 temperature 10.0 270 > th dose independent rect. 2 5
95 94.80 humidity 50.0 270 > th dose independent rect. 2 5
97 94.80 atmosphere 995.0 270 > th dose independent rect. 2 5
98 94.80 atmosphere 1015.0 270 < th dose independent rect. 2 5
101 94.80 temperature 10.0 270 > th dose independent rect. 7 19
104 94.82 radiation 10.0 270 < th dose independent rect. 3 4
111 94.84 temperature 10.0 90 > th dose independent rect. 9 18
116 94.86 wind 9.0 270 < th dose dependent rect. 2 5
120 94.88 wind 9.0 270 < th dose dependent rect. 3 3
121 94.88 radiation 20.0 270 < th dose dependent rect. 3 4
139 95.01 temperature 10.0 270 > th dose independent rect. 3 3
141 95.01 temperature 30.0 270 < th dose independent rect. 3 3
142 95.01 humidity 50.0 270 > th dose independent rect. 3 3
145 95.01 atmosphere 995.0 270 > th dose independent rect. 3 3
146 95.01 atmosphere 1015.0 270 < th dose independent rect. 3 3
150 95.01 temperature 10.0 270 > th dose independent rect. 6 21
153 95.03 radiation 1.0 270 > th dose dependent rect. 7 5
158 95.07 radiation 40.0 10 < th dose independent rect. 4 16
162 95.11 humidity 50.0 270 > th dose independent rect. 7 19
171 95.20 temperature 10.0 270 > th dose dependent rect. 3 3
175 95.23 humidity 50.0 270 > th dose independent rect. 6 21
183 95.29 radiation 1.0 90 > th dose dependent rect. 8 7
184 95.32 precipitation 0.1 90 < th dose independent rect. 9 18
188 95.32 precipitation 0.1 90 < th dose dependent rect. 9 18
192 95.35 humidity 50.0 270 > th dose independent rect. 7 7
193 95.37 precipitation 0.1 270 < th dose independent rect. 7 19
195 95.37 precipitation 0.1 270 < th dose dependent rect. 7 19
197 95.40 temperature 10.0 30 > th dose dependent rect. 4 5
200 95.44 temperature 10.0 270 > th dose dependent rect. 2 5
204 95.48 precipitation 0.1 270 < th dose independent rect. 14 17
206 95.48 precipitation 0.1 270 < th dose dependent rect. 14 17
224 95.54 wind 5.0 270 < th dose independent rect. 4 1
237 95.56 wind 1.0 90 > th dose independent rect. 8 7
240 95.57 precipitation 0.1 270 < th dose independent rect. 1 7
241 95.57 precipitation 0.1 270 < th dose dependent rect. 1 7
254 95.64 precipitation 0.1 270 < th dose independent rect. 3 15
255 95.64 precipitation 0.1 270 < th dose dependent rect. 3 15
272 95.68 temperature 10.0 30 > th dose dependent rect. 9 19
277 95.72 wind 7.0 270 < th dose independent rect. 7 7
292 95.84 precipitation 0.1 270 < th dose independent rect. 6 21
294 95.84 precipitation 0.1 270 < th dose dependent rect. 6 21
296 95.85 precipitation 0.1 270 < th dose independent rect. 7 7
298 95.85 precipitation 0.1 270 < th dose dependent rect. 7 7
305 95.87 temperature 15.0 270 > th dose independent rect. 14 17
306 95.87 radiation 40.0 10 < th dose independent rect. 12 21
328 95.98 humidity 60.0 270 > th dose independent rect. 18 9
331 96.00 radiation 1.0 270 < th dose independent rect. 18 9
332 96.00 radiation 10.0 270 < th dose dependent rect. 18 9
333 96.01 temperature 15.0 270 > th dose independent rect. 3 15
334 96.02 radiation 40.0 90 < th dose independent rect. 11 23
348 96.07 temperature 10.0 270 > th dose independent rect. 7 7
349 96.07 atmosphere 995.0 270 > th dose independent rect. 7 7
350 96.07 atmosphere 1015.0 270 < th dose independent rect. 7 7
355 96.08 temperature 10.0 270 > th dose independent rect. 1 7
357 96.08 temperature 30.0 270 < th dose independent rect. 1 7
358 96.08 humidity 50.0 270 > th dose independent rect. 1 7
360 96.08 atmosphere 995.0 270 > th dose independent rect. 1 7
361 96.08 atmosphere 1015.0 270 < th dose independent rect. 1 7
365 96.08 radiation 40.0 10 < th dose dependent rect. 5 15
369 96.10 humidity 70.0 90 > th dose independent rect. 3 8
373 96.11 wind 9.0 270 < th dose independent rect. 18 9
380 96.12 radiation 40.0 270 < th dose independent rect. 1 7
381 96.12 radiation 1.0 90 > th dose independent rect. 17 15
386 96.14 temperature 10.0 270 > th dose independent rect. 18 9
392 96.14 atmosphere 1015.0 270 < th dose independent rect. 3 15
409 96.22 humidity 50.0 90 > th dose independent rect. 9 6
412 96.23 temperature 10.0 43200 > th dose independent rect. 10 6
415 96.25 wind 9.0 270 < th dose dependent rect. 4 1
444 96.34 radiation 1.0 270 > th dose independent rect. 7 7
449 96.36 precipitation 0.1 270 < th dose independent rect. 4 1
450 96.36 precipitation 0.1 270 < th dose dependent rect. 4 1
453 96.37 humidity 90.0 90 < th dose independent rect. 8 7
454 96.37 radiation 1.0 270 > th dose dependent sin 7 NA
457 96.39 temperature 15.0 10 > th dose independent rect. 15 18
458 96.39 humidity 50.0 270 > th dose dependent rect. 3 3
464 96.41 atmosphere 995.0 270 > th dose independent rect. 14 17
469 96.43 wind 1.0 270 > th dose independent rect. 2 5
474 96.44 temperature 30.0 270 < th dose independent rect. 18 9
480 96.46 radiation 40.0 90 < th dose dependent rect. 13 20
482 96.47 atmosphere 995.0 270 > th dose independent rect. 18 9
506 96.55 wind 9.0 270 < th dose independent rect. 14 17
507 96.55 wind 9.0 270 < th dose independent rect. 5 23
534 96.60 humidity 50.0 270 > th dose dependent rect. 2 5
546 96.61 radiation 1.0 90 < th dose dependent sin 12 NA
559 96.62 humidity 50.0 30 > th dose independent rect. 9 19
579 96.65 radiation 1.0 10 > th dose independent rect. 9 6
580 96.65 wind 1.0 270 > th dose independent rect. 8 17
588 96.68 radiation 1.0 270 < th dose dependent rect. 4 1
622 96.71 temperature 10.0 10 > th dose independent rect. 9 6
624 96.71 atmosphere 995.0 10 > th dose independent rect. 9 6
625 96.71 atmosphere 1015.0 10 < th dose independent rect. 9 6
626 96.71 precipitation 0.1 10 < th dose independent rect. 9 6
628 96.71 atmosphere 995.0 90 > th dose independent rect. 9 18
629 96.71 precipitation 0.1 10 < th dose dependent rect. 9 6
632 96.72 temperature 10.0 270 > th dose independent rect. 4 1
634 96.72 temperature 30.0 270 < th dose independent rect. 4 1
635 96.72 humidity 50.0 270 > th dose independent rect. 4 1
638 96.72 atmosphere 995.0 270 > th dose independent rect. 4 1
639 96.72 atmosphere 1010.0 270 < th dose independent rect. 4 1
641 96.72 radiation 20.0 270 < th dose independent rect. 4 1
649 96.72 temperature 10.0 270 > th dose independent rect. 5 23
657 96.74 radiation 40.0 270 < th dose dependent rect. 4 1
697 96.82 humidity 90.0 10 < th dose independent rect. 9 6
702 96.83 radiation 1.0 270 < th dose independent rect. 4 1
718 96.86 wind 1.0 270 > th dose independent rect. 7 19
719 96.86 atmosphere 995.0 270 > th dose dependent rect. 3 3
725 96.88 temperature 10.0 1440 > th dose independent rect. 10 6
728 96.88 temperature 10.0 1440 > th dose independent rect. 16 18
731 96.89 wind 9.0 10 < th dose independent rect. 9 6
733 96.89 atmosphere 995.0 10 > th dose independent rect. 15 18
761 96.95 atmosphere 995.0 10 > th dose dependent rect. 4 5
770 96.97 radiation 1.0 10 > th dose dependent rect. 9 7
775 96.98 radiation 1.0 10 > th dose dependent rect. 9 9
789 97.00 atmosphere 1015.0 90 < th dose independent rect. 9 18
792 97.00 radiation 40.0 90 < th dose dependent rect. 15 18
802 97.03 radiation 40.0 10 < th dose independent rect. 15 18
806 97.04 radiation 10.0 90 > th dose dependent sin 3 NA
855 97.13 wind 9.0 270 < th dose independent rect. 3 15
867 97.16 precipitation 0.1 90 < th dose independent rect. 19 9
870 97.16 precipitation 0.1 90 < th dose dependent rect. 19 9
886 97.20 radiation 1.0 270 < th dose dependent rect. 8 19
888 97.21 atmosphere 995.0 270 > th dose independent rect. 3 15
966 97.31 radiation 40.0 270 < th dose dependent sin 6 NA
969 97.31 radiation 1.0 270 < th dose dependent rect. 12 15
976 97.32 radiation 1.0 270 < th dose dependent rect. 5 22
977 97.33 wind 1.0 270 > th dose independent rect. 9 1
989 97.34 radiation 20.0 270 > th dose independent rect. 9 2
996 97.35 atmosphere 995.0 270 > th dose independent rect. 7 19
997 97.35 temperature 10.0 270 > th dose dependent rect. 4 1
998 97.35 humidity 50.0 270 > th dose dependent rect. 4 1
999 97.35 humidity 50.0 90 > th dose dependent rect. 19 9