BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0276000 Os08g0276000|AK070103
(192 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0276000 Similar to Transmembrane protein TM9SF3 (Fragm... 344 2e-95
Os09g0557800 Similar to PHG1A protein 315 2e-86
Os08g0554900 Nonaspanin (TM9SF) family protein 310 3e-85
Os08g0555200 Nonaspanin (TM9SF) family protein 302 8e-83
Os06g0568000 Nonaspanin (TM9SF) family protein 302 9e-83
Os06g0650600 Nonaspanin (TM9SF) family protein 292 1e-79
AK061096 216 6e-57
Os08g0555300 Nonaspanin (TM9SF) family protein 192 9e-50
Os05g0168500 Nonaspanin (TM9SF) family protein 177 4e-45
Os08g0496900 Nonaspanin (TM9SF) family protein 171 4e-43
Os02g0797700 Nonaspanin (TM9SF) family protein 163 6e-41
Os02g0722300 Nonaspanin (TM9SF) family protein 160 4e-40
Os12g0175700 Nonaspanin (TM9SF) family protein 113 8e-26
Os11g0181100 Similar to Transmembrane protein TM9SF3 (Fragm... 111 3e-25
Os10g0112600 Nonaspanin (TM9SF) family protein 108 3e-24
Os03g0237000 Nonaspanin (TM9SF) family protein 106 1e-23
Os02g0552000 Similar to Transmembrane protein TM9SF3 (Fragm... 100 9e-22
>Os08g0276000 Similar to Transmembrane protein TM9SF3 (Fragment)
Length = 192
Score = 344 bits (883), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/192 (92%), Positives = 178/192 (92%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFM
Sbjct: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMGLLAGYSSSSLYKL 60
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL
Sbjct: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFILTS 180
VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFILTS
Sbjct: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFILTS 180
Query: 181 IWLHQFYYIFGF 192
IWLHQFYYIFGF
Sbjct: 181 IWLHQFYYIFGF 192
>Os09g0557800 Similar to PHG1A protein
Length = 646
Score = 315 bits (806), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/193 (82%), Positives = 168/193 (87%), Gaps = 1/193 (0%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCVYVGTGVQF GMLLVTM+FAVLGFLSPSNRGGLMTAMLL+WV M
Sbjct: 348 LCVYVGTGVQFFGMLLVTMIFAVLGFLSPSNRGGLMTAMLLVWVLMGLLAGYASSRLYKM 407
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
FKG+EWK I +RTAF FPG F IFF LN+LIWG+KSSGAVPFTTMFALVLLWFGISVPL
Sbjct: 408 FKGSEWKRITMRTAFLFPGIAFVIFFILNALIWGEKSSGAVPFTTMFALVLLWFGISVPL 467
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILT 179
VFVGS+LGFKKPA+E PVKTNKIPRQIPEQAWYMNPIF+ILIGGILPFGAVFIEL FILT
Sbjct: 468 VFVGSYLGFKKPALEPPVKTNKIPRQIPEQAWYMNPIFTILIGGILPFGAVFIELFFILT 527
Query: 180 SIWLHQFYYIFGF 192
SIWLHQFYYIFGF
Sbjct: 528 SIWLHQFYYIFGF 540
>Os08g0554900 Nonaspanin (TM9SF) family protein
Length = 646
Score = 310 bits (795), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/193 (81%), Positives = 168/193 (87%), Gaps = 1/193 (0%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCVYVGTGVQF GMLLVTM+FAVLGFLSPSNRGGLMTAMLL+WV M
Sbjct: 348 LCVYVGTGVQFFGMLLVTMMFAVLGFLSPSNRGGLMTAMLLIWVLMGLFAGYASSRLYKM 407
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
FKG+EWK+I L+TAF FPG F IFF LN+LIWG+KSSGAVPF+TMFALVLLWFGISVPL
Sbjct: 408 FKGSEWKSITLKTAFLFPGIAFGIFFVLNALIWGEKSSGAVPFSTMFALVLLWFGISVPL 467
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILT 179
VFVGS+LGFKKPAIE PVKTNKIPRQ+PEQAWYMNP F+ILIGGILPFGAVFIEL FILT
Sbjct: 468 VFVGSYLGFKKPAIEAPVKTNKIPRQVPEQAWYMNPAFTILIGGILPFGAVFIELFFILT 527
Query: 180 SIWLHQFYYIFGF 192
SIWLHQFYYIFGF
Sbjct: 528 SIWLHQFYYIFGF 540
>Os08g0555200 Nonaspanin (TM9SF) family protein
Length = 385
Score = 302 bits (774), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/193 (80%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCVYVGTGVQF GMLLVTM+FAVLGFLSPSNRGGLMTAMLL+WV M
Sbjct: 87 LCVYVGTGVQFFGMLLVTMMFAVLGFLSPSNRGGLMTAMLLIWVLMGLFAGYASSRLYKM 146
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
FKG+EWK+I L+TAF FPG F IFF LN+LIWG+KSSGAVPF+TMFALVLLWFGISVPL
Sbjct: 147 FKGSEWKSITLKTAFLFPGIAFGIFFVLNALIWGEKSSGAVPFSTMFALVLLWFGISVPL 206
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILT 179
VFVG +LGFKKPAIE PVKTNKIPRQIPEQA YMNP F+ILIGGILPFGAVFIEL FILT
Sbjct: 207 VFVGGYLGFKKPAIEAPVKTNKIPRQIPEQAGYMNPAFTILIGGILPFGAVFIELFFILT 266
Query: 180 SIWLHQFYYIFGF 192
SIWLHQFYYIFGF
Sbjct: 267 SIWLHQFYYIFGF 279
>Os06g0568000 Nonaspanin (TM9SF) family protein
Length = 380
Score = 302 bits (774), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/193 (79%), Positives = 166/193 (86%), Gaps = 1/193 (0%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCVYVGTGVQF GM LVTM+FA+LGFLSP+NRGGLMTAM+LLWVFM
Sbjct: 82 LCVYVGTGVQFFGMTLVTMMFALLGFLSPANRGGLMTAMVLLWVFMGVLAGYTSSRLYKM 141
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
FKG EWK I L+TAF FPG +FA+FFFLN+LIWG+KSSGAVPF TMFAL LLWFGISVPL
Sbjct: 142 FKGTEWKKITLKTAFMFPGIIFALFFFLNALIWGEKSSGAVPFGTMFALFLLWFGISVPL 201
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILT 179
VFVGSFLGFK+PAIEDPVKTNKIPRQIPEQAWY+ P FSIL GGILPFGAVFIEL FILT
Sbjct: 202 VFVGSFLGFKQPAIEDPVKTNKIPRQIPEQAWYLQPAFSILAGGILPFGAVFIELFFILT 261
Query: 180 SIWLHQFYYIFGF 192
SIWL+QFYYIFGF
Sbjct: 262 SIWLNQFYYIFGF 274
>Os06g0650600 Nonaspanin (TM9SF) family protein
Length = 645
Score = 292 bits (747), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/195 (74%), Positives = 165/195 (84%), Gaps = 3/195 (1%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCV+VGTGVQF+GMLLVT++FA+LG LSPSNRGGLMTAMLL+W FM
Sbjct: 345 LCVFVGTGVQFLGMLLVTLLFAILGLLSPSNRGGLMTAMLLVWAFMGVLAGYAAARLYRG 404
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
F+G+EWK +A+RTA FPG+ FA+FF LN+LIWG++SSGAVPFTTM ALVLLWFGISVPL
Sbjct: 405 FRGSEWKAVAMRTALAFPGAAFAVFFVLNALIWGERSSGAVPFTTMTALVLLWFGISVPL 464
Query: 121 VFVGSFLGFKKP-AIED-PVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FI 177
VFVGS+LGFK+P A ED PV+TNKIPR IPEQ WYMNP S+LIGGILPFGAVFIEL FI
Sbjct: 465 VFVGSYLGFKRPAATEDYPVRTNKIPRPIPEQPWYMNPAMSVLIGGILPFGAVFIELFFI 524
Query: 178 LTSIWLHQFYYIFGF 192
LTSIWLHQFYYIFGF
Sbjct: 525 LTSIWLHQFYYIFGF 539
>AK061096
Length = 524
Score = 216 bits (551), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 143/191 (74%), Gaps = 1/191 (0%)
Query: 3 VYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXXFK 62
V+VGTGVQ M +TMV A+LG LSP+NRG L+T +LLL+VFM F
Sbjct: 228 VFVGTGVQVCSMSAITMVIALLGLLSPANRGSLLTTLLLLFVFMGSFAGYYSSRTYKMFN 287
Query: 63 GAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPLVF 122
G WK + TA +PGS+F +FF LN ++W + SS AVPF T+FAL++LWFGISVPLVF
Sbjct: 288 GKNWKYNTVLTAVLYPGSLFGVFFILNLVLWSKASSQAVPFGTLFALLVLWFGISVPLVF 347
Query: 123 VGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILTSI 181
+GS+ GFK P IE PV+TN+I RQ+PEQ WY++ +FSIL+GGILPFGAVFIEL FI++++
Sbjct: 348 LGSYFGFKAPQIEHPVRTNQIARQVPEQVWYLSSLFSILVGGILPFGAVFIELFFIMSAL 407
Query: 182 WLHQFYYIFGF 192
WLHQ YY+FGF
Sbjct: 408 WLHQIYYVFGF 418
>Os08g0555300 Nonaspanin (TM9SF) family protein
Length = 323
Score = 192 bits (489), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 2 CVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXXF 61
C GV F ++L+T+ FA LGF SPSN GL +LL WV M F
Sbjct: 25 CSVPMQGVVFNSLVLITVAFAALGFFSPSNSAGLRNVVLLTWVLMGMLAGYTSSRLYKMF 84
Query: 62 K-GAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
K G+EWK+I + TA FPG F IF LN+L+ + SS VP TTM ALVLLW GI+ PL
Sbjct: 85 KSGSEWKHITMATAIQFPGFAFVIFAILNTLLQDENSSATVPPTTMCALVLLWSGITPPL 144
Query: 121 VFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIELFI-LT 179
VF+G +LG+K+PAIE PV+ NK PR+IP+QAWY++P+FSILIG I PF VFIELF L
Sbjct: 145 VFLGGYLGYKRPAIEPPVEINKTPRKIPKQAWYISPVFSILIGSIFPFTIVFIELFFGLI 204
Query: 180 SIWLHQFYYIFGF 192
IW HQFY FGF
Sbjct: 205 FIWYHQFYRGFGF 217
>Os05g0168500 Nonaspanin (TM9SF) family protein
Length = 656
Score = 177 bits (449), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 134/196 (68%), Gaps = 7/196 (3%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCV V G+Q GM +VT+VFA LGFLSP++RG L+T M++L++F+
Sbjct: 357 LCVMVADGIQITGMAVVTIVFAALGFLSPASRGMLLTGMIILYLFLGIIAGYVGVRVWRT 416
Query: 61 FKGAE--WKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISV 118
KG WK++A T+ FPG VF I LNS++WG+KS+GA+P + F L+ LWF ISV
Sbjct: 417 IKGTSEGWKSVAWLTSCFFPGIVFVILTVLNSILWGKKSTGALPISLFFTLLALWFCISV 476
Query: 119 PLVFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIG-GILPFGAVFIEL-F 176
PL +G LG + +IE PV+TN+IPR+IPE+ + P + +++G G LPFG +FIEL F
Sbjct: 477 PLTLIGGLLGTRAASIEYPVRTNQIPREIPERKF---PSWLLVLGAGTLPFGTLFIELFF 533
Query: 177 ILTSIWLHQFYYIFGF 192
IL+SIWL +FYY+FGF
Sbjct: 534 ILSSIWLGRFYYVFGF 549
>Os08g0496900 Nonaspanin (TM9SF) family protein
Length = 661
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 134/196 (68%), Gaps = 7/196 (3%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCV +G GVQ +GM +VT++F+ LGF+SP++RG L+T M++L++F+
Sbjct: 362 LCVMIGDGVQILGMAIVTIIFSTLGFMSPASRGMLLTGMIILYLFLGIAAGYVSVRLWKT 421
Query: 61 FKGAE--WKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISV 118
KG W++++ TA FPG +F + LN ++WG KS+GA+P + FAL+ +WF ISV
Sbjct: 422 IKGTSEGWRSVSWLTACFFPGVLFMVLTVLNFVLWGSKSTGALPISLFFALLAMWFCISV 481
Query: 119 PLVFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIG-GILPFGAVFIEL-F 176
PL VG F+G + IE PV+TN+IPR+IP + + P + +++G G LPFG +FIEL F
Sbjct: 482 PLTLVGGFVGTRSAQIEFPVRTNQIPREIPARKY---PSWLLVLGAGTLPFGTLFIELFF 538
Query: 177 ILTSIWLHQFYYIFGF 192
IL+SIWL +FYY+FGF
Sbjct: 539 ILSSIWLGRFYYVFGF 554
>Os02g0797700 Nonaspanin (TM9SF) family protein
Length = 665
Score = 163 bits (413), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 126/196 (64%), Gaps = 8/196 (4%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCV VG GVQ +GM +VT++FA LGF+SP++RG L+T ML ++ +
Sbjct: 365 LCVMVGDGVQILGMAVVTILFAALGFMSPASRGTLITGMLFFYLVLGILAGYVGVRVWKT 424
Query: 61 FKGAE---WKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGIS 117
K + W ++ R A FPG F I LN L+WG +S+GA+PF+ L+LLWF IS
Sbjct: 425 IKCGDHTGWMAVSWRVACFFPGIAFLILTTLNFLLWGSQSTGAIPFSLFVILILLWFCIS 484
Query: 118 VPLVFVGSFLGFKKPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIG-GILPFGAVFIEL- 175
VPL VG LG K P IE PV+TN+IPR+IP Q + P + +++G G LPFG +FIEL
Sbjct: 485 VPLTLVGGLLGAKAPHIEYPVRTNQIPREIPPQKY---PSWLLVLGAGTLPFGTLFIELF 541
Query: 176 FILTSIWLHQFYYIFG 191
FI++SIW+ + YY+FG
Sbjct: 542 FIMSSIWMGRVYYVFG 557
>Os02g0722300 Nonaspanin (TM9SF) family protein
Length = 653
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 125/197 (63%), Gaps = 10/197 (5%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
LCV +G GVQ +GM +VT+ FA GF+SP++RG L+T M+ L++ +
Sbjct: 355 LCVMIGDGVQILGMAIVTIFFAAFGFMSPASRGMLLTGMIFLYMLLGIVAGYAAVRLWRT 414
Query: 61 FKGAE--WKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISV 118
KG W++++ TA FPG VF + LN ++W + S+GA+P + F L+ LWF ISV
Sbjct: 415 LKGTSEGWRSVSWSTACFFPGIVFVVLTVLNFMLWSRNSTGALPISLFFTLLSLWFCISV 474
Query: 119 PLVFVGSFLGFKKPAIEDPVKTNKIPRQIPEQ--AWYMNPIFSILIGGILPFGAVFIEL- 175
PL +G F G + IE PV+TN+IPR+IP + +W + +L G LPFG +FIEL
Sbjct: 475 PLTLLGGFFGTRAEPIEFPVRTNQIPREIPAKNYSWLL-----VLGAGTLPFGTLFIELF 529
Query: 176 FILTSIWLHQFYYIFGF 192
FIL+SIWL +FYY+FGF
Sbjct: 530 FILSSIWLGRFYYVFGF 546
>Os12g0175700 Nonaspanin (TM9SF) family protein
Length = 598
Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
L VG G Q ++L+ +V A++G L RG ++T ++ +
Sbjct: 300 LSAVVGIGTQLAALILLVIVLAIVGMLY-VGRGSIITTFIVCYALTSFISGYVSGGLYSR 358
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
G W + TA FP FAI F LN++ +S A+PF TM + +LW IS PL
Sbjct: 359 NGGKNWIKAMILTASLFPFLCFAIGFVLNTIAIFYRSLAAIPFGTMVVMFVLWAFISFPL 418
Query: 121 VFVGSFLGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FIL 178
V +G+ +G A +P + IPR IPE+ WY+ P L+GG+LPFG++FIE+ F+
Sbjct: 419 VLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVF 478
Query: 179 TSIWLHQFYYIFGF 192
TS W ++ YY++GF
Sbjct: 479 TSFWNYKVYYVYGF 492
>Os11g0181100 Similar to Transmembrane protein TM9SF3 (Fragment)
Length = 593
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 104/194 (53%), Gaps = 3/194 (1%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
L +VG G Q ++L+ +V A++G L RG ++T ++ +
Sbjct: 295 LSAFVGIGTQLAALILLVIVLAIVGMLYVG-RGAIITTFIVCYALTSFISGYVSGGLYSR 353
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
G W + TA FP F+I LN++ +S A+PF TM + +LW IS PL
Sbjct: 354 NGGKNWIKSMILTASLFPFLCFSIGLVLNTIAIFYRSLAAIPFGTMVVIFVLWAFISFPL 413
Query: 121 VFVGSFLGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FIL 178
V +G+ +G A +P + IPR IPE+ WY+ P L+GG+LPFG++FIE+ F+
Sbjct: 414 VLLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVF 473
Query: 179 TSIWLHQFYYIFGF 192
TS W ++ YY++GF
Sbjct: 474 TSFWNYKVYYVYGF 487
>Os10g0112600 Nonaspanin (TM9SF) family protein
Length = 585
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 5 VGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXXFKGA 64
+GTG Q + + A++G P NRG L TA+++++ F+G
Sbjct: 290 LGTGTQLFALTTFIFLLALVGVFYPYNRGALFTALVVIYALTSGIAGYSATSFYCQFEGK 349
Query: 65 EWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPLVFVG 124
W L T F G +F F FLN++ S+ A+PF T+ +VL+W ++ PL+ +G
Sbjct: 350 NWVRNLLLTGCLFCGPLFLTFCFLNTVAIAYNSTAALPFGTICVIVLIWTLVTFPLLVLG 409
Query: 125 SFLGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILTSIW 182
G K + P +T K R++P AWY I + + G LPF A++IEL +I SIW
Sbjct: 410 GIAGKNSKNEFQAPCRTTKFLREVPPLAWYRRTIPQMAMAGFLPFSAIYIELYYIFASIW 469
Query: 183 LHQFYYIFG 191
H+ Y I+
Sbjct: 470 GHRIYTIYS 478
>Os03g0237000 Nonaspanin (TM9SF) family protein
Length = 595
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 5 VGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXXFKGA 64
+GTG Q + + A++G P NRG L TA+++++ +G
Sbjct: 300 LGTGTQLFALTTFIFLLALVGVFYPYNRGALFTALVVIYALTSGIAGYIATSFYCQLEGT 359
Query: 65 EWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPLVFVG 124
W L T F G +F F FLN++ ++ A+PF T+ +VL+W ++ PL+ +G
Sbjct: 360 NWVRNLLLTGCLFCGPLFLTFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTFPLLVLG 419
Query: 125 SFLGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FILTSIW 182
G K + P +T K PR+IP WY I + + G LPF A++IEL +I S+W
Sbjct: 420 GIAGKNSKTEFQAPCRTTKYPREIPPLPWYRQTIPQMAMAGFLPFSAIYIELYYIFASVW 479
Query: 183 LHQFYYIFG 191
H+ Y I+
Sbjct: 480 GHRIYTIYS 488
>Os02g0552000 Similar to Transmembrane protein TM9SF3 (Fragment)
Length = 590
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 1 LCVYVGTGVQFIGMLLVTMVFAVLGFLSPSNRGGLMTAMLLLWVFMXXXXXXXXXXXXXX 60
L VG G Q ++L+ ++ A++G L RG ++T ++ +
Sbjct: 292 LSALVGVGTQLSALILLVILLAIIGMLYIG-RGAIVTTFIVCYALTSFISGYVSGALYSR 350
Query: 61 FKGAEWKNIALRTAFTFPGSVFAIFFFLNSLIWGQKSSGAVPFTTMFALVLLWFGISVPL 120
G W + TA FP F I LN++ +S A+PF TM + +LW IS PL
Sbjct: 351 HGGKNWIKAMIMTASLFPFMCFGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPL 410
Query: 121 VFVGSFLGFK-KPAIEDPVKTNKIPRQIPEQAWYMNPIFSILIGGILPFGAVFIEL-FIL 178
+G+ +G A +P + IPR IPE+ WY+ P L+GG+LPFG++FIE+ F+
Sbjct: 411 ALLGTVVGRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVF 470
Query: 179 TSIWLHQFYYIFGF 192
TS W ++ YY++GF
Sbjct: 471 TSFWNYKVYYVYGF 484
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.334 0.148 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,848,043
Number of extensions: 213324
Number of successful extensions: 629
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 594
Number of HSP's successfully gapped: 17
Length of query: 192
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 97
Effective length of database: 12,075,471
Effective search space: 1171320687
Effective search space used: 1171320687
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 153 (63.5 bits)