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Os02g0722300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nonaspanin (TM9SF) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0162) R2 : 0.0206
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.106 (0.0341) R2dN8 : 0.0266 R2N8 : 0.0206
σ : 0.305
deviance : 42.82
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.47 0.246 10.9 0.577 0.197 0.522 0.0604 -0.369 0.25 19.6 91.28 249 -- --
27.64 0.245 10.9 0.57 0.205 0.522 0.198 -- 0.248 19.3 91.26 248 -- --
27.48 0.244 10.9 0.577 0.195 0.523 -- -0.396 0.25 19.7 91.48 248 -- --
27.72 0.245 10.9 0.567 0.197 0.498 -- -- 0.245 19.7 91.28 248 -- --
29.05 0.251 10.9 0.587 -- 0.466 -- -0.518 0.228 -- 92.56 229 -- --
31.65 0.264 10.9 0.608 0.133 -- -0.0907 -- 0.171 0.35 -- -- -- --
31.69 0.264 10.9 0.612 0.134 -- -- -- 0.172 0.279 -- -- -- --
29.37 0.252 10.9 0.58 -- 0.449 -- -- 0.224 -- 92.66 230 -- --
36.05 0.28 10.9 -- 0.222 0.565 -- -- 0.195 19.5 90.74 258 -- --
32.81 0.268 10.9 0.616 -- -- -- -- 0.174 -- -- -- -- --
41.55 0.302 10.9 -- 0.142 -- -- -- 0.104 0.507 -- -- -- --
38.09 0.287 10.9 -- -- 0.446 -- -- 0.171 -- 91.55 229 -- --
42.82 0.305 10.9 -- -- -- -- -- 0.106 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.45 temperature 15.0 270 > th dose dependent rect. 6 6
2 25.59 temperature 15.0 270 > th dose dependent rect. 7 4
49 26.50 humidity 90.0 270 < th dose independent rect. 7 4
53 26.54 temperature 25.0 270 > th dose dependent rect. 20 15
54 26.55 humidity 90.0 270 < th dose independent rect. 6 6
57 26.57 humidity 90.0 270 < th dose independent rect. 24 12
67 26.62 temperature 25.0 270 > th dose independent rect. 22 13
68 26.62 temperature 25.0 270 > th dose independent rect. 18 18
69 26.63 temperature 25.0 270 > th dose independent rect. 21 15
70 26.63 humidity 90.0 270 > th dose dependent rect. 1 9
77 26.66 humidity 90.0 270 > th dose independent rect. 1 9
92 26.72 humidity 90.0 270 > th dose dependent sin 6 NA
101 26.74 temperature 25.0 270 < th dose independent rect. 1 7
113 26.76 temperature 10.0 270 > th dose dependent rect. 21 14
132 26.80 atmosphere 1015.0 270 < th dose dependent rect. 7 4
135 26.81 temperature 25.0 270 > th dose independent sin 8 NA
179 26.93 temperature 25.0 270 < th dose independent sin 8 NA
211 26.99 atmosphere 1015.0 10 < th dose dependent rect. 8 6
235 27.04 temperature 25.0 90 > th dose dependent sin 7 NA
269 27.10 humidity 90.0 270 > th dose independent sin 6 NA
274 27.11 radiation 1.0 270 > th dose independent rect. 6 6
276 27.11 atmosphere 1015.0 270 < th dose dependent rect. 9 1
300 27.14 wind 7.0 270 < th dose independent rect. 16 10
361 27.21 temperature 15.0 270 > th dose independent rect. 12 18
411 27.27 temperature 15.0 270 > th dose independent rect. 11 20
419 27.28 atmosphere 995.0 270 > th dose independent rect. 12 18
441 27.30 radiation 1.0 270 > th dose independent rect. 7 4
481 27.33 humidity 90.0 270 > th dose dependent rect. 3 2
504 27.36 atmosphere 995.0 270 > th dose independent rect. 11 20
523 27.38 humidity 90.0 270 < th dose independent rect. 18 18
541 27.40 temperature 15.0 270 > th dose independent rect. 6 6
567 27.43 wind 9.0 270 < th dose independent rect. 6 6
583 27.44 humidity 90.0 270 < th dose independent sin 6 NA
598 27.45 temperature 15.0 270 > th dose independent rect. 7 4
599 27.45 precipitation 0.1 270 < th dose independent rect. 6 6
605 27.45 precipitation 0.1 270 < th dose dependent rect. 6 6
614 27.46 temperature 25.0 270 > th dose independent rect. 7 4
633 27.48 wind 7.0 270 < th dose independent rect. 7 4
636 27.48 wind 1.0 10 > th dose independent rect. 8 6
638 27.48 atmosphere 995.0 270 > th dose independent rect. 6 6
639 27.48 atmosphere 1015.0 270 < th dose independent rect. 6 6
649 27.49 precipitation 0.1 270 < th dose independent rect. 7 4
653 27.49 wind 5.0 270 < th dose independent rect. 6 20
655 27.49 wind 9.0 270 < th dose dependent rect. 7 4
656 27.49 precipitation 0.1 270 < th dose dependent rect. 7 4
660 27.49 radiation 40.0 270 < th dose dependent rect. 15 11
672 27.50 wind 9.0 270 < th dose dependent rect. 6 6
682 27.50 temperature 30.0 90 < th dose dependent rect. 3 14
684 27.51 humidity 50.0 270 > th dose independent rect. 7 4
686 27.51 humidity 50.0 270 > th dose independent rect. 6 6
700 27.52 atmosphere 995.0 270 > th dose independent rect. 7 4
701 27.52 atmosphere 1015.0 270 < th dose independent rect. 7 4
730 27.54 wind 5.0 90 < th dose independent rect. 8 20
759 27.57 temperature 25.0 270 < th dose independent rect. 1 14
760 27.57 radiation 1.0 270 > th dose dependent rect. 7 4
768 27.58 humidity 90.0 10 > th dose independent rect. 4 6
808 27.60 wind 9.0 270 < th dose dependent rect. 6 20
811 27.61 temperature 30.0 90 < th dose independent rect. 3 14
825 27.62 temperature 25.0 270 < th dose independent rect. 3 2
858 27.64 humidity 90.0 10 < th dose independent rect. 3 11
861 27.64 temperature 15.0 10 > th dose independent rect. 14 18
862 27.64 precipitation 0.1 270 < th dose independent rect. 12 18
882 27.64 precipitation 0.1 270 < th dose dependent rect. 12 18
902 27.66 radiation 1.0 270 > th dose independent sin 4 NA
905 27.66 humidity 90.0 10 > th dose independent rect. 4 4
906 27.66 temperature 25.0 270 > th dose independent rect. 4 8
952 27.68 radiation 1.0 270 < th dose independent rect. 3 6
954 27.68 radiation 1.0 270 < th dose independent rect. 3 10
955 27.68 radiation 10.0 270 < th dose independent rect. 15 11
967 27.68 wind 9.0 270 < th dose dependent rect. 7 18
979 27.69 wind 9.0 270 < th dose independent rect. 12 18
983 27.69 temperature 30.0 10 < th dose dependent rect. 4 14