Os03g0237000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
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Os03g0237000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nonaspanin (TM9SF) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.72 | 0.292 | 13.1 | 1.05 | 0.538 | 0.712 | 0.0834 | -1.02 | 0.644 | 19.6 | 92.88 | 336 | -- | -- |
| 39.55 | 0.293 | 13.1 | 1.04 | 0.551 | 0.792 | 0.373 | -- | 0.634 | 19.6 | 93.4 | 335 | -- | -- |
| 38.56 | 0.289 | 13.1 | 1.06 | 0.53 | 0.804 | -- | -1.23 | 0.635 | 19.7 | 93.66 | 324 | -- | -- |
| 39.93 | 0.294 | 13.1 | 1.03 | 0.54 | 0.802 | -- | -- | 0.628 | 19.6 | 93.63 | 323 | -- | -- |
| 50.38 | 0.331 | 13.1 | 1.1 | -- | 0.546 | -- | -1.61 | 0.575 | -- | 94.69 | 307 | -- | -- |
| 44.83 | 0.314 | 13.1 | 1.06 | 0.39 | -- | 0.216 | -- | 0.558 | 20.4 | -- | -- | -- | -- |
| 44.98 | 0.314 | 13.1 | 1.05 | 0.39 | -- | -- | -- | 0.558 | 20.4 | -- | -- | -- | -- |
| 51.63 | 0.335 | 13.1 | 1.07 | -- | 0.721 | -- | -- | 0.567 | -- | 96 | 270 | -- | -- |
| 66.86 | 0.381 | 13.1 | -- | 0.578 | 0.773 | -- | -- | 0.545 | 19.4 | 92.38 | 303 | -- | -- |
| 53.42 | 0.342 | 13.1 | 1.05 | -- | -- | -- | -- | 0.554 | -- | -- | -- | -- | -- |
| 74.18 | 0.403 | 13.1 | -- | 0.385 | -- | -- | -- | 0.441 | 20.6 | -- | -- | -- | -- |
| 79.3 | 0.415 | 13.1 | -- | -- | 0.424 | -- | -- | 0.552 | -- | 90.98 | 5798 | -- | -- |
| 82.51 | 0.424 | 13.1 | -- | -- | -- | -- | -- | 0.437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.43 | wind | 1.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 5 | 36.45 | wind | 1.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 19 | 36.54 | wind | 1.0 | 30 | < th | dose dependent | rect. | 14 | 4 |
| 33 | 36.60 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 8 |
| 37 | 36.62 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 40 | 36.62 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 47 | 36.66 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 6 |
| 49 | 37.14 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 53 | 37.16 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 65 | 37.27 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 8 |
| 69 | 37.29 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 6 |
| 89 | 38.03 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 3 |
| 101 | 38.67 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 3 |
| 110 | 39.41 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 111 | 39.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 114 | 39.50 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 3 |
| 123 | 39.96 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 124 | 39.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 134 | 40.21 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 136 | 40.23 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 137 | 40.25 | humidity | 90.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 139 | 40.28 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 142 | 40.31 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 166 | 40.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 173 | 40.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 175 | 40.42 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 201 | 40.48 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 227 | 40.53 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 237 | 40.56 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 20 |
| 238 | 40.56 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 250 | 40.60 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 4 |
| 289 | 40.66 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 299 | 40.67 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 310 | 40.69 | wind | 1.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 314 | 40.69 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 315 | 40.69 | wind | 1.0 | 270 | < th | dose dependent | rect. | 12 | 6 |
| 350 | 40.74 | humidity | 90.0 | 30 | > th | dose dependent | sin | 2 | NA |
| 378 | 40.80 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 411 | 40.87 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 440 | 40.95 | wind | 1.0 | 30 | < th | dose independent | sin | 20 | NA |
| 479 | 41.09 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 18 |
| 489 | 41.11 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 511 | 41.14 | humidity | 90.0 | 10 | > th | dose independent | rect. | 4 | 4 |
| 561 | 41.24 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 24 | 22 |
| 602 | 41.29 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 10 |
| 603 | 41.30 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 632 | 41.35 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 633 | 41.35 | atmosphere | 1005.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 655 | 41.39 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 658 | 41.40 | humidity | 90.0 | 10 | > th | dose independent | sin | 2 | NA |
| 667 | 41.41 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 17 |
| 678 | 41.42 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 19 |
| 682 | 41.42 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 690 | 41.43 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 698 | 41.44 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 15 |
| 706 | 41.45 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 23 |
| 708 | 41.45 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 8 |
| 796 | 41.54 | wind | 7.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 837 | 41.58 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 15 |
| 841 | 41.58 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 844 | 41.58 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 4 | 4 |
| 854 | 41.59 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 14 |
| 878 | 41.61 | wind | 7.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 879 | 41.61 | wind | 5.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 889 | 41.61 | wind | 3.0 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 980 | 41.69 | wind | 5.0 | 720 | < th | dose independent | rect. | 6 | 21 |
| 992 | 41.69 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 998 | 41.70 | wind | 5.0 | 720 | < th | dose independent | rect. | 6 | 23 |