Os02g0797700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
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Os02g0797700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nonaspanin (TM9SF) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.82 | 0.315 | 12.1 | 1.15 | 0.209 | 0.671 | -0.681 | -1.53 | 0.507 | 13.7 | 93.38 | 150 | -- | -- |
| 46.84 | 0.319 | 12 | 1.15 | 0.186 | 0.68 | -0.488 | -- | 0.492 | 13.1 | 93.76 | 175 | -- | -- |
| 46.28 | 0.317 | 12.1 | 1.13 | 0.225 | 0.721 | -- | -1.11 | 0.508 | 14.3 | 93.3 | 175 | -- | -- |
| 47.45 | 0.321 | 12 | 1.12 | 0.229 | 0.715 | -- | -- | 0.504 | 14.6 | 93.44 | 178 | -- | -- |
| 48.18 | 0.323 | 12.1 | 1.18 | -- | 0.578 | -- | -1.22 | 0.505 | -- | 93 | 432 | -- | -- |
| 51.63 | 0.337 | 12.1 | 1.19 | 0.13 | -- | -0.57 | -- | 0.434 | 11 | -- | -- | -- | -- |
| 53 | 0.341 | 12.1 | 1.17 | 0.134 | -- | -- | -- | 0.431 | 10.7 | -- | -- | -- | -- |
| 49.79 | 0.329 | 12.1 | 1.14 | -- | 0.61 | -- | -- | 0.489 | -- | 93.39 | 354 | -- | -- |
| 80 | 0.417 | 12.1 | -- | 0.272 | 0.776 | -- | -- | 0.408 | 15 | 92.6 | 177 | -- | -- |
| 54.1 | 0.344 | 12.1 | 1.17 | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
| 88.98 | 0.441 | 12.1 | -- | 0.127 | -- | -- | -- | 0.301 | 10.1 | -- | -- | -- | -- |
| 83.11 | 0.425 | 12.1 | -- | -- | 0.64 | -- | -- | 0.397 | -- | 92 | 388 | -- | -- |
| 89.96 | 0.443 | 12.1 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.05 | humidity | 90 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 5 | 44.11 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 17 | 44.29 | humidity | 90 | 30 | > th | dose dependent | rect. | 24 | 10 |
| 30 | 44.56 | humidity | 90 | 30 | > th | dose dependent | rect. | 24 | 18 |
| 46 | 44.74 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 58 | 44.88 | humidity | 90 | 30 | > th | dose dependent | sin | 5 | NA |
| 62 | 44.93 | wind | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 93 | 45.30 | humidity | 90 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 115 | 45.44 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 117 | 45.46 | humidity | 90 | 90 | > th | dose independent | rect. | 24 | 7 |
| 118 | 45.46 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 128 | 45.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 130 | 45.47 | humidity | 70 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 141 | 45.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 155 | 45.61 | wind | 1 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 161 | 45.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 163 | 45.68 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 181 | 45.73 | humidity | 90 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 191 | 45.76 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 200 | 45.79 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 16 |
| 201 | 45.79 | humidity | 90 | 270 | > th | dose dependent | sin | 11 | NA |
| 204 | 45.80 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 207 | 45.81 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 209 | 45.81 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 219 | 45.82 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 220 | 45.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 221 | 45.82 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 236 | 45.83 | temperature | 30 | 4320 | < th | dose independent | rect. | 18 | 18 |
| 243 | 45.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 244 | 45.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 245 | 45.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 246 | 45.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 16 |
| 248 | 45.84 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 263 | 45.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 271 | 45.87 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 288 | 45.88 | wind | 1 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 349 | 45.95 | humidity | 90 | 90 | > th | dose dependent | rect. | 16 | 15 |
| 358 | 45.96 | humidity | 90 | 90 | > th | dose independent | rect. | 24 | 9 |
| 438 | 46.04 | temperature | 30 | 1440 | < th | dose independent | sin | 9 | NA |
| 448 | 46.04 | temperature | 30 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 467 | 46.05 | humidity | 90 | 10 | > th | dose independent | rect. | 4 | 2 |
| 488 | 46.07 | temperature | 30 | 1440 | > th | dose independent | sin | 8 | NA |
| 502 | 46.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 533 | 46.11 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 1 |
| 544 | 46.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 546 | 46.12 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 551 | 46.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 552 | 46.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 567 | 46.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 576 | 46.15 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 618 | 46.18 | humidity | 90 | 90 | > th | dose dependent | rect. | 16 | 18 |
| 650 | 46.23 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 674 | 46.23 | radiation | 30 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 685 | 46.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 780 | 46.32 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 814 | 46.33 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 819 | 46.33 | humidity | 90 | 30 | > th | dose dependent | rect. | 4 | 2 |
| 894 | 46.35 | humidity | 50 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 968 | 46.38 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 2 |