Os08g0496900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
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Os08g0496900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nonaspanin (TM9SF) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.52 | 0.284 | 10.9 | 0.344 | 1.88 | -0.669 | 0.479 | 0.527 | -0.0042 | 15.5 | 9.85 | 12 | -- | -- |
| 37.38 | 0.285 | 10.9 | 0.306 | 1.88 | -0.664 | 0.0394 | -- | -0.00536 | 15.4 | 9.38 | 10 | -- | -- |
| 36.69 | 0.282 | 10.9 | 0.339 | 1.85 | -0.676 | -- | 0.39 | -0.0171 | 15.5 | 9.241 | 12 | -- | -- |
| 37.36 | 0.285 | 10.9 | 0.316 | 1.86 | -0.684 | -- | -- | -0.0173 | 15.5 | 9.243 | 12 | -- | -- |
| 62.47 | 0.368 | 11.1 | -0.145 | -- | -1.86 | -- | -0.1 | -0.434 | -- | 2.34 | 293 | -- | -- |
| 50.53 | 0.333 | 10.9 | 0.264 | 2.39 | -- | -0.0237 | -- | -0.0359 | 14.6 | -- | -- | -- | -- |
| 50.54 | 0.333 | 10.9 | 0.263 | 2.39 | -- | -- | -- | -0.0361 | 14.6 | -- | -- | -- | -- |
| 49.41 | 0.327 | 11 | 0.147 | -- | -2.01 | -- | -- | -0.129 | -- | 2.18 | 315 | -- | -- |
| 39.86 | 0.294 | 10.9 | -- | 1.89 | -0.641 | -- | -- | -0.0356 | 15.4 | 9.361 | 10 | -- | -- |
| 386.29 | 0.918 | 10.9 | 0.161 | -- | -- | -- | -- | -0.0961 | -- | -- | -- | -- | -- |
| 52.36 | 0.338 | 10.9 | -- | 2.39 | -- | -- | -- | -0.0654 | 14.6 | -- | -- | -- | -- |
| 49.87 | 0.329 | 11 | -- | -- | -2.01 | -- | -- | -0.142 | -- | 1.91 | 319 | -- | -- |
| 386.98 | 0.918 | 10.9 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.95 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 3 | 29.51 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 7 | 30.15 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 11 | 30.38 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 13 | 30.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 15 | 30.62 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 39 | 31.64 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 62 | 32.19 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 65 | 32.26 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 68 | 32.28 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 73 | 32.37 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 74 | 32.38 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 87 | 32.49 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 88 | 32.50 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 109 | 32.75 | radiation | 10.0 | 10 | < th | dose independent | rect. | 3 | 7 |
| 119 | 32.86 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 125 | 32.89 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 19 |
| 126 | 32.90 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 132 | 32.97 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 7 | 20 |
| 133 | 32.97 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 140 | 33.02 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 143 | 33.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 144 | 33.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 164 | 33.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 202 | 33.49 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 206 | 33.51 | humidity | 70.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 209 | 33.52 | radiation | 10.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 220 | 33.56 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 239 | 33.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 21 |
| 255 | 33.73 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 256 | 33.73 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 279 | 33.85 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 293 | 33.91 | radiation | 10.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 297 | 33.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 299 | 33.94 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 304 | 33.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 306 | 33.95 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 307 | 33.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 310 | 33.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 311 | 33.95 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 317 | 33.95 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 318 | 33.95 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 345 | 34.04 | wind | 9.0 | 90 | < th | dose independent | rect. | 7 | 20 |
| 359 | 34.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 7 | 20 |
| 360 | 34.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 23 |
| 364 | 34.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 366 | 34.08 | radiation | 10.0 | 90 | < th | dose independent | rect. | 13 | 21 |
| 378 | 34.13 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 4 |
| 380 | 34.13 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 422 | 34.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 3 |
| 434 | 34.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 440 | 34.35 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 444 | 34.36 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 450 | 34.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 452 | 34.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 453 | 34.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 456 | 34.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 467 | 34.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 509 | 34.54 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 522 | 34.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 535 | 34.60 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 537 | 34.60 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 563 | 34.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 10 |
| 565 | 34.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 566 | 34.66 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 17 |
| 567 | 34.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 575 | 34.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 577 | 34.69 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 578 | 34.69 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 581 | 34.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 582 | 34.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 584 | 34.69 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 589 | 34.69 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 590 | 34.69 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 609 | 34.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 644 | 34.83 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 655 | 34.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 656 | 34.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 657 | 34.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 679 | 34.89 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 701 | 34.97 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 10 |
| 722 | 35.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 726 | 35.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 744 | 35.08 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 7 |
| 758 | 35.11 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 796 | 35.16 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 813 | 35.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 814 | 35.20 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 815 | 35.20 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 856 | 35.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 865 | 35.33 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 1 |
| 869 | 35.33 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 876 | 35.34 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 18 |
| 879 | 35.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 894 | 35.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 954 | 35.44 | humidity | 70.0 | 10 | > th | dose independent | rect. | 3 | 5 |
| 973 | 35.45 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 16 | 15 |
| 981 | 35.47 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 18 |