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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0555300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nonaspanin (TM9SF) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.16 (0.0466) R2 : 0.0114
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.225 (0.0982) R2dN8 : 0.0147 R2N8 : 0.0114
σ : 0.878
deviance : 353.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
332 0.856 3.15 0.496 0.521 -0.21 -3.01 2.78 0.271 0.355 8.882 6 -- --
339.16 0.858 3.16 0.525 0.472 -0.18 -0.0908 -- 0.262 0.594 2.843 5 -- --
338 0.856 3.14 0.563 0.04 0.429 -- 0.404 0.295 23.7 182.7 25 -- --
338.25 0.857 3.14 0.554 0.0738 0.404 -- -- 0.294 2.6 201.3 25 -- --
338.04 0.856 3.14 0.569 -- 0.474 -- 0.398 0.298 -- 190.7 25 -- --
340.26 0.865 3.15 0.546 0.291 -- -0.1 -- 0.281 0.989 -- -- -- --
340.29 0.864 3.15 0.55 0.291 -- -- -- 0.282 0.817 -- -- -- --
338.43 0.857 3.14 0.556 -- 0.47 -- -- 0.297 -- 218 25 -- --
346.32 0.867 3.16 -- 0.0876 0.397 -- -- 0.232 2.57 212.1 25 -- --
345.59 0.869 3.14 0.561 -- -- -- -- 0.287 -- -- -- -- --
348.27 0.873 3.16 -- 0.3 -- -- -- 0.221 0.9 -- -- -- --
346.58 0.867 3.16 -- -- 0.475 -- -- 0.236 -- 242.2 25 -- --
353.88 0.878 3.16 -- -- -- -- -- 0.225 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 323.13 humidity 70.0 30 < th dose independent rect. 17 2
26 323.63 humidity 70.0 90 < th dose dependent rect. 17 2
70 325.49 wind 1.0 30 < th dose independent rect. 17 1
81 325.49 wind 1.0 30 < th dose dependent rect. 17 1
94 325.67 radiation 1.0 270 > th dose independent rect. 4 1
104 325.67 radiation 1.0 270 > th dose dependent rect. 4 1
125 325.73 wind 1.0 10 < th dose dependent rect. 11 12
143 326.30 wind 1.0 10 < th dose dependent rect. 21 2
147 326.53 wind 1.0 10 < th dose dependent rect. 15 8
153 326.71 humidity 80.0 30 > th dose independent rect. 20 13
156 326.92 wind 1.0 10 < th dose independent rect. 22 1
177 327.39 temperature 10.0 10 > th dose dependent rect. 20 12
224 328.12 radiation 30.0 30 < th dose independent rect. 20 14
228 328.25 humidity 80.0 30 > th dose independent rect. 20 19
253 328.59 humidity 90.0 90 < th dose independent rect. 3 1
260 328.74 wind 1.0 270 < th dose independent rect. 5 1
262 328.76 humidity 70.0 10 > th dose independent rect. 13 22
264 328.81 wind 1.0 30 < th dose dependent rect. 6 1
266 328.91 precipitation 0.1 90 > th dose dependent rect. 13 2
271 328.95 temperature 10.0 720 > th dose dependent rect. 20 1
272 328.96 precipitation 0.1 90 > th dose independent rect. 13 1
279 329.13 temperature 25.0 270 > th dose independent rect. 20 1
280 329.19 radiation 10.0 90 < th dose independent rect. 12 6
281 329.21 radiation 10.0 10 < th dose dependent rect. 14 1
292 329.39 radiation 10.0 10 < th dose independent rect. 14 1
298 329.54 radiation 10.0 90 < th dose independent rect. 12 1
299 329.60 humidity 90.0 90 < th dose independent rect. 2 6
306 329.66 temperature 25.0 10 < th dose independent rect. 18 1
309 329.67 temperature 20.0 30 > th dose independent rect. 8 12
311 329.70 atmosphere 1005.0 10 > th dose independent rect. 7 1
312 329.70 temperature 20.0 90 > th dose dependent rect. 20 2
319 329.77 radiation 20.0 90 < th dose dependent rect. 12 1
334 329.87 atmosphere 1015.0 720 < th dose independent rect. 20 1
335 329.88 humidity 60.0 90 > th dose independent rect. 23 14
339 329.93 temperature 20.0 30 > th dose dependent rect. 20 5
340 329.94 humidity 80.0 720 > th dose independent rect. 20 1
345 330.02 atmosphere 1015.0 30 < th dose independent rect. 20 12
348 330.07 wind 1.0 720 > th dose independent rect. 20 1
353 330.08 wind 1.0 720 > th dose independent rect. 19 4
380 330.18 humidity 60.0 30 > th dose independent rect. 1 12
391 330.27 humidity 90.0 90 < th dose dependent rect. 2 3
397 330.32 wind 5.0 30 < th dose independent rect. 20 12
400 330.37 humidity 50.0 10 > th dose dependent rect. 20 14
410 330.45 radiation 10.0 90 < th dose dependent rect. 12 6
415 330.49 wind 1.0 10 < th dose independent rect. 15 8
419 330.53 atmosphere 1005.0 30 > th dose dependent rect. 13 8
424 330.58 atmosphere 1005.0 720 > th dose independent rect. 1 1
425 330.58 humidity 60.0 10 > th dose independent rect. 23 14
428 330.60 temperature 20.0 30 > th dose independent rect. 20 12
437 330.66 temperature 10.0 30 > th dose dependent rect. 8 12
442 330.69 radiation 10.0 10 < th dose dependent rect. 6 12
449 330.73 humidity 50.0 720 > th dose dependent rect. 20 1
461 330.80 wind 1.0 270 < th dose independent rect. 4 19
464 330.82 radiation 10.0 30 < th dose dependent rect. 8 10
470 330.85 precipitation 0.1 30 < th dose independent rect. 8 12
471 330.85 precipitation 0.1 30 < th dose dependent rect. 8 12
473 330.87 wind 9.0 30 < th dose independent rect. 20 12
482 330.92 humidity 90.0 10 < th dose dependent rect. 3 1
487 330.95 wind 9.0 720 < th dose independent rect. 20 1
489 330.95 precipitation 0.1 10 < th dose independent rect. 20 12
491 330.95 precipitation 0.1 10 < th dose dependent rect. 20 12
492 330.96 temperature 10.0 720 > th dose independent rect. 20 1
493 330.96 temperature 30.0 720 < th dose independent rect. 20 1
494 330.96 humidity 50.0 720 > th dose independent rect. 20 1
497 330.96 atmosphere 995.0 720 > th dose independent rect. 20 1
498 330.96 radiation 1.0 720 < th dose independent rect. 20 1
503 330.96 temperature 10.0 720 > th dose independent rect. 21 23
504 330.96 radiation 1.0 720 < th dose dependent rect. 20 1
510 330.97 temperature 10.0 1440 > th dose independent rect. 9 12
513 330.97 temperature 10.0 1440 > th dose independent rect. 21 12
516 330.97 humidity 50.0 1440 > th dose independent rect. 21 12
518 330.97 atmosphere 995.0 1440 > th dose independent rect. 21 12
528 331.00 wind 9.0 720 < th dose independent rect. 8 1
529 331.00 temperature 10.0 720 > th dose independent rect. 8 1
531 331.00 humidity 50.0 720 > th dose independent rect. 8 1
532 331.00 atmosphere 995.0 720 > th dose independent rect. 8 1
533 331.00 atmosphere 1015.0 720 < th dose independent rect. 8 1
535 331.00 temperature 10.0 720 > th dose independent rect. 9 23
537 331.01 atmosphere 1005.0 30 > th dose independent rect. 16 2
541 331.02 temperature 10.0 30 > th dose independent rect. 8 12
543 331.02 temperature 10.0 30 > th dose independent rect. 20 12
544 331.02 temperature 30.0 30 < th dose independent rect. 20 12
545 331.02 humidity 50.0 30 > th dose independent rect. 20 12
547 331.02 atmosphere 995.0 30 > th dose independent rect. 20 12
548 331.02 atmosphere 1015.0 30 < th dose independent rect. 8 12
550 331.02 radiation 10.0 10 < th dose dependent rect. 4 23
551 331.02 radiation 10.0 10 < th dose dependent rect. 21 23
555 331.05 precipitation 0.1 720 < th dose independent rect. 8 1
560 331.05 precipitation 0.1 720 < th dose dependent rect. 8 1
574 331.09 radiation 10.0 90 < th dose independent rect. 8 10
577 331.10 wind 9.0 30 < th dose independent rect. 8 12
580 331.11 atmosphere 1005.0 30 > th dose independent rect. 13 5
582 331.11 temperature 20.0 10 > th dose dependent rect. 20 3
590 331.15 radiation 40.0 720 < th dose independent rect. 8 1
602 331.18 radiation 10.0 90 < th dose dependent rect. 5 13
604 331.19 radiation 20.0 30 < th dose independent rect. 20 19
611 331.22 humidity 60.0 10 > th dose independent rect. 10 3
614 331.23 radiation 1.0 720 > th dose independent rect. 8 1
625 331.28 humidity 90.0 10 < th dose independent rect. 8 12
640 331.30 wind 9.0 720 < th dose independent rect. 9 23
642 331.31 wind 1.0 270 < th dose independent rect. 4 8
648 331.34 atmosphere 1005.0 90 < th dose independent rect. 4 3
651 331.35 humidity 80.0 30 > th dose independent rect. 20 3
659 331.36 radiation 40.0 30 < th dose dependent rect. 20 14
661 331.36 radiation 30.0 30 < th dose dependent rect. 20 22
668 331.41 humidity 60.0 10 > th dose independent rect. 8 5
675 331.43 wind 1.0 10 > th dose independent rect. 9 11
701 331.49 radiation 10.0 10 < th dose dependent rect. 8 7
716 331.52 atmosphere 995.0 30 > th dose independent rect. 8 12
722 331.54 radiation 10.0 10 < th dose dependent rect. 16 23
743 331.60 humidity 80.0 90 < th dose independent rect. 24 5
750 331.62 humidity 60.0 720 > th dose independent rect. 13 1
758 331.64 precipitation 0.1 720 < th dose independent rect. 20 1
760 331.64 precipitation 0.1 720 < th dose dependent rect. 20 1
772 331.69 atmosphere 1005.0 10 < th dose independent rect. 5 1
781 331.69 wind 9.0 720 < th dose dependent rect. 8 1
783 331.70 humidity 80.0 10 > th dose dependent rect. 14 1
791 331.72 humidity 50.0 90 > th dose independent rect. 13 10
793 331.73 wind 1.0 270 < th dose independent rect. 5 5
805 331.77 radiation 10.0 90 < th dose independent rect. 16 1
809 331.77 wind 1.0 720 > th dose independent rect. 13 9
819 331.81 humidity 60.0 10 > th dose independent rect. 18 19
820 331.81 radiation 10.0 30 < th dose independent rect. 20 22
836 331.88 precipitation 0.1 720 < th dose independent rect. 8 10
837 331.88 precipitation 0.1 720 < th dose dependent rect. 8 10
847 331.90 radiation 10.0 90 < th dose independent rect. 12 19
850 331.91 humidity 90.0 10 < th dose independent rect. 3 13
861 331.93 wind 5.0 270 < th dose independent rect. 18 13
865 331.94 temperature 10.0 720 > th dose dependent rect. 8 1
871 331.95 temperature 30.0 270 < th dose independent rect. 17 14
877 331.95 wind 1.0 30 < th dose dependent rect. 5 18
894 331.99 radiation 10.0 90 < th dose independent rect. 5 13
909 332.04 atmosphere 1015.0 720 < th dose independent rect. 19 4
910 332.04 radiation 10.0 10 < th dose independent rect. 9 9
912 332.04 wind 9.0 10 < th dose dependent rect. 20 13
921 332.07 temperature 20.0 30 > th dose independent rect. 5 13
929 332.08 humidity 50.0 720 > th dose independent rect. 10 22
932 332.08 temperature 20.0 30 > th dose dependent rect. 20 8
939 332.11 humidity 80.0 30 > th dose independent rect. 5 23
960 332.14 wind 3.0 270 < th dose dependent rect. 3 20
962 332.15 radiation 1.0 4320 < th dose dependent rect. 21 3
981 332.19 humidity 50.0 720 > th dose independent rect. 10 5
985 332.19 radiation 30.0 30 < th dose dependent rect. 20 19