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Os09g0557800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PHG1A protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0198) R2 : 0.0509
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.206 (0.0416) R2dN8 : 0.0657 R2N8 : 0.0509
σ : 0.373
deviance : 63.7
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.55 0.284 10.7 0.699 0.563 0.481 0.117 -1.27 0.372 16.5 89.57 267 -- --
38.58 0.289 10.7 0.639 0.595 0.461 0.783 -- 0.36 16.7 88.38 262 -- --
36.57 0.282 10.7 0.7 0.557 0.473 -- -1.32 0.371 16.4 89.53 266 -- --
39.96 0.294 10.7 0.653 0.594 0.386 -- -- 0.349 16.4 86.43 254 -- --
47.11 0.32 10.7 0.752 -- 0.0906 -- -1.62 0.324 -- 92.4 332 -- --
42.84 0.307 10.7 0.699 0.376 -- 0.5 -- 0.29 16.5 -- -- -- --
43.43 0.309 10.7 0.703 0.379 -- -- -- 0.292 16.1 -- -- -- --
48.5 0.324 10.7 0.667 -- 0.404 -- -- 0.325 -- 76 1150 -- --
50.9 0.332 10.7 -- 0.639 0.492 -- -- 0.297 16.5 86.5 271 -- --
51.22 0.334 10.7 0.688 -- -- -- -- 0.282 -- -- -- -- --
56.46 0.352 10.7 -- 0.365 -- -- -- 0.214 16.1 -- -- -- --
59.57 0.359 10.7 -- -- 0.468 -- -- 0.272 -- 83.05 1116 -- --
63.7 0.373 10.7 -- -- -- -- -- 0.206 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.93 wind 5.0 90 < th dose independent rect. 7 22
10 35.18 radiation 1.0 1440 > th dose independent rect. 9 4
11 35.22 radiation 1.0 1440 > th dose independent rect. 10 2
12 35.33 humidity 90.0 270 < th dose independent rect. 17 18
17 35.56 humidity 50.0 270 > th dose dependent rect. 21 10
22 35.66 temperature 15.0 270 > th dose independent rect. 7 14
24 35.66 wind 9.0 90 < th dose dependent rect. 7 22
28 35.76 wind 5.0 270 < th dose independent rect. 17 18
32 35.86 radiation 40.0 4320 < th dose dependent rect. 19 10
39 36.04 radiation 1.0 1440 < th dose independent rect. 9 3
41 36.04 radiation 1.0 1440 < th dose dependent rect. 9 3
43 36.07 humidity 70.0 90 > th dose dependent sin 6 NA
48 36.11 humidity 50.0 30 > th dose dependent rect. 5 13
49 36.12 wind 5.0 90 < th dose independent rect. 9 16
52 36.15 radiation 1.0 1440 > th dose independent rect. 8 8
53 36.15 temperature 10.0 270 > th dose dependent rect. 17 9
59 36.20 temperature 15.0 270 > th dose independent rect. 18 17
68 36.27 radiation 1.0 1440 < th dose independent rect. 8 8
76 36.31 humidity 90.0 270 > th dose dependent rect. 21 16
101 36.40 radiation 1.0 1440 < th dose dependent rect. 8 6
113 36.45 radiation 1.0 1440 < th dose dependent rect. 8 8
116 36.46 humidity 90.0 270 > th dose dependent rect. 7 23
140 36.50 humidity 90.0 270 > th dose dependent rect. 2 23
171 36.56 radiation 1.0 720 > th dose independent rect. 7 12
191 36.57 humidity 80.0 1440 < th dose independent rect. 8 6
193 36.57 radiation 1.0 720 > th dose independent rect. 8 10
195 36.57 humidity 90.0 270 > th dose dependent no NA NA
257 36.67 temperature 15.0 270 > th dose independent rect. 7 18
265 36.68 humidity 90.0 270 > th dose dependent rect. 10 23
274 36.72 wind 7.0 270 < th dose independent rect. 16 10
276 36.72 temperature 10.0 270 > th dose dependent rect. 18 17
277 36.73 humidity 90.0 270 > th dose independent sin 7 NA
278 36.73 humidity 50.0 270 > th dose dependent sin 9 NA
283 36.74 humidity 90.0 270 > th dose independent rect. 21 16
290 36.75 wind 9.0 270 < th dose dependent rect. 17 18
295 36.76 humidity 90.0 270 > th dose independent rect. 22 13
312 36.78 temperature 15.0 90 > th dose independent rect. 7 22
357 36.86 humidity 80.0 1440 > th dose independent rect. 8 6
366 36.88 temperature 15.0 270 > th dose independent rect. 6 20
371 36.89 wind 5.0 30 < th dose independent rect. 18 11
401 36.91 radiation 1.0 1440 < th dose dependent rect. 15 1
447 36.97 temperature 15.0 30 > th dose independent rect. 18 11
448 36.97 humidity 60.0 30 > th dose independent rect. 18 11
452 36.98 temperature 15.0 270 > th dose independent rect. 7 4
465 36.99 radiation 1.0 30 < th dose dependent rect. 18 11
468 37.00 humidity 90.0 270 < th dose independent sin 10 NA
469 37.00 temperature 30.0 30 < th dose independent rect. 18 11
475 37.01 radiation 1.0 270 < th dose independent sin 4 NA
510 37.06 wind 7.0 270 < th dose independent rect. 7 15
519 37.07 radiation 1.0 270 > th dose independent rect. 7 4
522 37.07 radiation 1.0 30 < th dose independent rect. 18 11
532 37.08 radiation 1.0 270 < th dose independent rect. 3 13
534 37.08 temperature 15.0 90 > th dose independent rect. 9 16
543 37.09 temperature 15.0 270 > th dose independent rect. 16 10
553 37.10 radiation 1.0 1440 < th dose independent rect. 15 1
562 37.11 wind 5.0 90 < th dose independent sin 18 NA
588 37.15 radiation 1.0 1440 > th dose independent rect. 15 1
592 37.15 precipitation 0.1 270 < th dose independent rect. 7 14
596 37.15 radiation 1.0 270 < th dose dependent rect. 3 13
597 37.15 precipitation 0.1 270 < th dose dependent rect. 7 14
616 37.18 humidity 60.0 14400 > th dose independent rect. 20 10
627 37.18 wind 9.0 90 < th dose dependent rect. 9 16
648 37.21 wind 9.0 270 < th dose dependent rect. 7 15
668 37.25 wind 7.0 10 < th dose independent rect. 9 3
684 37.26 atmosphere 1015.0 270 < th dose independent rect. 7 14
685 37.26 humidity 90.0 270 < th dose independent rect. 7 18
703 37.29 temperature 20.0 30 > th dose independent rect. 9 3
704 37.29 wind 7.0 270 < th dose independent rect. 7 4
705 37.29 atmosphere 1010.0 30 < th dose independent rect. 18 11
706 37.29 humidity 80.0 90 > th dose dependent rect. 5 2
710 37.29 radiation 30.0 30 < th dose dependent rect. 5 13
713 37.30 humidity 90.0 30 < th dose independent rect. 9 3
733 37.31 wind 5.0 90 > th dose independent rect. 11 22
740 37.32 radiation 1.0 1440 < th dose dependent rect. 13 1
789 37.37 wind 9.0 270 < th dose dependent rect. 7 4
795 37.37 wind 9.0 10 < th dose dependent rect. 18 18
822 37.39 radiation 1.0 270 < th dose dependent sin 4 NA
831 37.40 humidity 90.0 270 < th dose independent rect. 7 4
870 37.43 precipitation 0.1 1440 < th dose independent rect. 10 3
874 37.43 radiation 20.0 4320 < th dose independent rect. 19 11
880 37.43 precipitation 0.1 1440 < th dose dependent rect. 10 3
884 37.43 wind 9.0 90 < th dose dependent rect. 9 14
885 37.44 humidity 80.0 1440 > th dose independent rect. 11 2
886 37.44 humidity 70.0 270 > th dose independent rect. 21 10
889 37.44 wind 5.0 90 > th dose independent rect. 11 19
893 37.44 radiation 1.0 720 < th dose independent rect. 19 23
907 37.45 humidity 80.0 30 > th dose independent rect. 5 11
914 37.46 radiation 20.0 270 < th dose independent rect. 21 10
944 37.47 precipitation 0.1 270 < th dose independent rect. 7 4
945 37.47 temperature 15.0 270 > th dose independent rect. 6 6
946 37.47 temperature 10.0 270 > th dose independent rect. 21 10
947 37.47 temperature 30.0 270 < th dose independent rect. 21 10
948 37.47 humidity 50.0 270 > th dose independent rect. 21 10
951 37.47 atmosphere 995.0 270 > th dose independent rect. 21 10
976 37.47 precipitation 0.1 270 < th dose dependent rect. 7 4
982 37.48 atmosphere 995.0 30 > th dose independent rect. 18 11
986 37.48 temperature 10.0 30 > th dose independent rect. 5 13
988 37.48 atmosphere 1015.0 30 < th dose independent rect. 5 13
994 37.48 radiation 1.0 1440 < th dose independent rect. 8 19
1000 37.48 humidity 80.0 270 > th dose dependent rect. 1 14