Os08g0554900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0554900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Nonaspanin (TM9SF) family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.16 | 0.29 | 10 | 0.316 | 0.297 | 0.135 | -0.637 | -4.76 | -0.101 | 7.34 | 29.8 | 4223 | -- | -- |
| 39.21 | 0.292 | 10.2 | -0.585 | 0.313 | -0.467 | -0.703 | -- | -0.466 | 6.4 | 32.9 | 16981 | -- | -- |
| 39.01 | 0.291 | 10.1 | 0.293 | 0.302 | 0.0706 | -- | -4.59 | -0.0744 | 7.6 | 29.68 | 3708 | -- | -- |
| 39.82 | 0.294 | 10.2 | -0.617 | 0.319 | -0.497 | -- | -- | -0.478 | 7.57 | 33 | 16538 | -- | -- |
| 43.77 | 0.308 | 10.1 | 0.385 | -- | 0.104 | -- | -4.61 | -0.0616 | -- | 29.5 | 4276 | -- | -- |
| 46.69 | 0.32 | 10.2 | -0.422 | 0.312 | -- | -0.64 | -- | -0.213 | 7.09 | -- | -- | -- | -- |
| 47.76 | 0.324 | 10.2 | -0.435 | 0.31 | -- | -- | -- | -0.211 | 7.18 | -- | -- | -- | -- |
| 44.92 | 0.312 | 10.2 | -0.62 | -- | -0.487 | -- | -- | -0.458 | -- | 33 | 17029 | -- | -- |
| 49.15 | 0.327 | 10.2 | -- | 0.308 | -0.305 | -- | -- | -0.326 | 7.37 | 32.6 | 16952 | -- | -- |
| 52.84 | 0.34 | 10.2 | -0.429 | -- | -- | -- | -- | -0.205 | -- | -- | -- | -- | -- |
| 52.74 | 0.34 | 10.1 | -- | 0.305 | -- | -- | -- | -0.163 | 7.27 | -- | -- | -- | -- |
| 53.65 | 0.341 | 10.2 | -- | -- | -0.314 | -- | -- | -0.302 | -- | 32.7 | 13139 | -- | -- |
| 57.69 | 0.355 | 10.2 | -- | -- | -- | -- | -- | -0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.06 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 2 | 37.14 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 3 | 37.15 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 4 | 37.20 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 5 | 37.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 7 | 37.24 | humidity | 80 | 14400 | < th | dose dependent | rect. | 16 | 7 |
| 10 | 37.26 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 7 |
| 29 | 37.31 | humidity | 70 | 14400 | > th | dose independent | sin | 12 | NA |
| 37 | 37.34 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 60 | 37.39 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 66 | 37.40 | humidity | 80 | 14400 | < th | dose dependent | sin | 14 | NA |
| 70 | 37.41 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 82 | 37.43 | humidity | 80 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 85 | 37.44 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 108 | 37.46 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 116 | 37.48 | humidity | 70 | 14400 | < th | dose independent | sin | 12 | NA |
| 180 | 37.58 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 188 | 37.59 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |
| 191 | 37.59 | humidity | 70 | 14400 | < th | dose independent | no | NA | NA |
| 192 | 37.59 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 193 | 37.59 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 194 | 37.59 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 278 | 37.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 14 |
| 279 | 37.60 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 340 | 37.60 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 529 | 37.68 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 597 | 37.71 | wind | 7 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 634 | 37.74 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 664 | 37.77 | wind | 7 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 670 | 37.78 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 687 | 37.80 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 713 | 37.81 | humidity | 70 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 717 | 37.82 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 735 | 37.83 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 744 | 37.84 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 767 | 37.87 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 778 | 37.89 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 12 |
| 783 | 37.90 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 784 | 37.90 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 10 |
| 894 | 37.96 | wind | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 920 | 37.98 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 946 | 37.99 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 4 |