Os10g0112600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
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Os10g0112600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nonaspanin (TM9SF) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.11 | 0.312 | 9.35 | 0.252 | 0.213 | 0.0242 | -0.823 | 2.56 | -0.0663 | 12.5 | 20.11 | 1775 | -- | -- |
| 48.12 | 0.326 | 9.44 | -0.471 | 0.109 | 0.364 | -0.913 | -- | -0.254 | 11.7 | 25.58 | 3679 | -- | -- |
| 45.95 | 0.316 | 9.35 | 0.202 | 0.231 | 0.0759 | -- | 2.6 | -0.0762 | 12.5 | 19.63 | 2346 | -- | -- |
| 51.11 | 0.335 | 9.43 | -0.508 | 0.128 | 0.428 | -- | -- | -0.243 | 10.7 | 27.08 | 4475 | -- | -- |
| 49.07 | 0.326 | 9.34 | 0.348 | -- | -0.0531 | -- | 2.97 | -0.0316 | -- | 20.48 | 2328 | -- | -- |
| 50.54 | 0.333 | 9.43 | -0.424 | 0.207 | -- | -0.849 | -- | -0.235 | 12.2 | -- | -- | -- | -- |
| 53.61 | 0.343 | 9.43 | -0.456 | 0.212 | -- | -- | -- | -0.239 | 12.7 | -- | -- | -- | -- |
| 52.05 | 0.337 | 9.44 | -0.517 | -- | 0.489 | -- | -- | -0.243 | -- | 27.08 | 4475 | -- | -- |
| 57.72 | 0.356 | 9.42 | -- | 0.151 | 0.313 | -- | -- | -0.186 | 11.7 | 27.08 | 4475 | -- | -- |
| 56.43 | 0.351 | 9.44 | -0.464 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 59.09 | 0.36 | 9.42 | -- | 0.219 | -- | -- | -- | -0.188 | 12.8 | -- | -- | -- | -- |
| 58.99 | 0.359 | 9.42 | -- | -- | 0.409 | -- | -- | -0.187 | -- | 27.08 | 4475 | -- | -- |
| 62.1 | 0.368 | 9.42 | -- | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 10 | 42.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 14 | 42.86 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 25 | 43.17 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 40 | 43.54 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 42 | 43.55 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 49 | 43.64 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 3 | 15 |
| 61 | 43.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 79 | 43.93 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 14 |
| 84 | 43.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 86 | 43.96 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 90 | 43.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 92 | 43.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 96 | 43.98 | temperature | 25 | 4320 | > th | dose independent | sin | 9 | NA |
| 97 | 43.98 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 5 | 14 |
| 99 | 43.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 10 |
| 101 | 44.00 | temperature | 25 | 4320 | < th | dose independent | sin | 9 | NA |
| 107 | 44.01 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 109 | 44.02 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 13 |
| 112 | 44.02 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 143 | 44.07 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 178 | 44.12 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 222 | 44.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 230 | 44.19 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 12 |
| 353 | 44.30 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 356 | 44.30 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 384 | 44.32 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 455 | 44.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 507 | 44.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 522 | 44.42 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 568 | 44.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 10 | 22 |
| 595 | 44.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 616 | 44.47 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 618 | 44.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 620 | 44.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 646 | 44.49 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 668 | 44.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 678 | 44.50 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 682 | 44.50 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 713 | 44.52 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 734 | 44.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 738 | 44.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 778 | 44.55 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 787 | 44.55 | wind | 5 | 43200 | > th | dose dependent | rect. | 8 | 1 |