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Os06g0650600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Nonaspanin (TM9SF) family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0174) R2 : 0.657
β1 : 1.25 (0.0638) R2dD : 0.3 R2D : 0.14
β2 : 0.68 (0.0418) R2dC : 0.2 R2C : 0.131
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.675 (0.0372) R2dN8 : 0.332 R2N8 : 0.152
σ : 0.328
deviance : 48.93
__
_____
C
peak time of C : 22.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.21 0.312 11.4 1.24 0.657 0.388 0.0744 -0.968 0.75 21.7 90.25 28 -- --
46.18 0.319 11.4 1.2 0.651 0.333 -0.125 -- 0.731 21.6 90.31 22 -- --
44.23 0.31 11.4 1.23 0.657 0.388 -- -0.941 0.75 21.7 90.24 27 -- --
46.24 0.319 11.4 1.21 0.653 0.338 -- -- 0.731 21.6 90.56 21 -- --
68.75 0.388 11.4 1.23 -- 0.445 -- -0.829 0.76 -- 88.99 8 -- --
48.87 0.328 11.4 1.25 0.68 -- -0.114 -- 0.674 22.5 -- -- -- --
48.93 0.328 11.4 1.25 0.68 -- -- -- 0.675 22.5 -- -- -- --
70.54 0.393 11.3 1.2 -- 0.385 -- -- 0.748 -- 87.63 4 -- --
84.1 0.429 11.4 -- 0.653 0.501 -- -- 0.626 21.3 90.56 21 -- --
77.34 0.411 11.4 1.26 -- -- -- -- 0.678 -- -- -- -- --
90.1 0.444 11.4 -- 0.689 -- -- -- 0.536 22.7 -- -- -- --
107.79 0.485 11.4 -- -- 0.45 -- -- 0.617 -- 81.97 2 -- --
119.36 0.51 11.4 -- -- -- -- -- 0.538 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.90 atmosphere 1005.0 270 > th dose dependent rect. 23 8
6 42.86 atmosphere 1005.0 270 > th dose dependent rect. 2 5
8 42.91 atmosphere 1005.0 10 > th dose dependent rect. 24 9
10 42.94 wind 5.0 4320 < th dose independent rect. 9 1
12 42.98 wind 1.0 1440 < th dose dependent rect. 6 1
15 43.03 radiation 10.0 1440 > th dose independent rect. 11 2
16 43.05 wind 5.0 4320 > th dose independent rect. 9 1
21 43.28 humidity 90.0 720 > th dose dependent rect. 20 6
26 43.39 humidity 90.0 720 > th dose dependent rect. 23 3
28 43.40 wind 1.0 1440 < th dose independent rect. 6 1
30 43.41 precipitation 0.1 43200 < th dose independent rect. 1 3
31 43.41 precipitation 0.1 43200 < th dose dependent rect. 1 3
34 43.43 precipitation 0.1 43200 > th dose independent rect. 1 3
37 43.45 humidity 90.0 10 > th dose dependent rect. 24 18
39 43.46 atmosphere 1005.0 10 > th dose dependent sin 6 NA
41 43.47 precipitation 0.1 43200 > th dose dependent rect. 1 3
42 43.47 humidity 90.0 10 > th dose dependent rect. 24 14
46 43.48 humidity 90.0 30 > th dose dependent rect. 24 7
53 43.51 humidity 90.0 10 > th dose dependent rect. 24 10
63 43.54 humidity 90.0 720 > th dose independent rect. 20 6
73 43.55 humidity 90.0 10 > th dose dependent rect. 24 22
91 43.59 atmosphere 1005.0 10 > th dose dependent rect. 3 6
103 43.60 radiation 10.0 1440 < th dose dependent rect. 10 5
123 43.64 wind 1.0 1440 > th dose independent rect. 6 1
126 43.64 radiation 10.0 1440 < th dose dependent rect. 13 2
138 43.66 humidity 90.0 720 > th dose independent rect. 23 3
147 43.68 humidity 90.0 30 > th dose dependent sin 7 NA
155 43.71 wind 7.0 14400 > th dose independent rect. 16 3
156 43.71 wind 7.0 14400 < th dose independent rect. 16 3
159 43.71 precipitation 0.1 43200 > th dose independent rect. 24 8
163 43.71 precipitation 0.1 43200 > th dose dependent rect. 24 12
167 43.72 precipitation 0.1 43200 < th dose independent rect. 24 8
171 43.72 precipitation 0.1 43200 > th dose dependent rect. 24 8
172 43.72 precipitation 0.1 43200 < th dose dependent rect. 24 8
193 43.77 precipitation 0.1 43200 > th dose independent rect. 1 11
195 43.78 precipitation 0.1 43200 < th dose independent rect. 1 11
200 43.78 precipitation 0.1 43200 < th dose dependent rect. 1 11
231 43.82 radiation 1.0 1440 < th dose independent rect. 11 1
235 43.82 radiation 1.0 1440 < th dose dependent rect. 11 1
262 43.84 humidity 90.0 43200 < th dose independent rect. 20 5
292 43.86 humidity 90.0 43200 > th dose independent rect. 20 5
319 43.88 wind 1.0 14400 < th dose dependent rect. 21 4
362 43.91 wind 3.0 4320 > th dose dependent rect. 8 2
366 43.92 humidity 90.0 43200 > th dose independent rect. 23 1
392 43.94 humidity 90.0 43200 > th dose independent rect. 21 1
393 43.94 humidity 90.0 43200 < th dose independent rect. 21 1
395 43.94 precipitation 0.1 43200 > th dose dependent sin 6 NA
404 43.95 humidity 90.0 43200 > th dose dependent rect. 23 1
406 43.95 humidity 80.0 43200 > th dose dependent rect. 21 2
407 43.95 wind 7.0 14400 > th dose dependent rect. 16 3
420 43.96 humidity 80.0 43200 > th dose dependent rect. 20 4
426 43.97 precipitation 0.1 43200 > th dose independent sin 6 NA
427 43.97 precipitation 0.1 43200 < th dose independent sin 6 NA
428 43.97 wind 1.0 43200 > th dose independent rect. 6 1
431 43.97 humidity 90.0 43200 < th dose independent rect. 23 2
440 43.97 precipitation 0.1 43200 < th dose dependent sin 6 NA
444 43.97 humidity 80.0 43200 > th dose dependent rect. 18 7
456 43.98 wind 1.0 14400 < th dose independent rect. 11 3
474 43.98 wind 1.0 14400 < th dose dependent rect. 17 10
496 44.00 radiation 1.0 4320 > th dose independent rect. 17 1
497 44.00 wind 1.0 14400 > th dose independent rect. 11 3
502 44.00 wind 7.0 43200 > th dose dependent rect. 18 1
528 44.02 wind 7.0 14400 < th dose independent rect. 18 1
543 44.02 radiation 40.0 4320 < th dose dependent rect. 17 1
561 44.03 humidity 90.0 10 < th dose independent rect. 23 10
565 44.03 radiation 20.0 4320 < th dose dependent rect. 17 1
674 44.10 wind 7.0 14400 > th dose independent rect. 18 1
706 44.12 humidity 80.0 14400 > th dose dependent rect. 6 1
719 44.12 wind 1.0 14400 < th dose dependent rect. 10 17
721 44.12 wind 1.0 14400 < th dose dependent rect. 8 19
731 44.13 wind 1.0 14400 < th dose independent rect. 8 17
732 44.13 precipitation 0.1 270 > th dose dependent rect. 2 2
739 44.14 precipitation 0.1 270 > th dose independent rect. 2 2
764 44.15 wind 1.0 14400 > th dose independent rect. 8 17
776 44.16 radiation 1.0 1440 < th dose independent rect. 9 4
780 44.16 wind 1.0 14400 < th dose independent rect. 8 19
781 44.16 humidity 50.0 14400 > th dose dependent rect. 6 1
784 44.16 precipitation 0.1 43200 > th dose dependent rect. 19 1
794 44.17 precipitation 0.1 43200 > th dose independent rect. 7 1
812 44.17 humidity 90.0 30 > th dose dependent rect. 13 18
820 44.18 wind 1.0 14400 > th dose independent rect. 8 19
821 44.18 humidity 80.0 43200 > th dose dependent sin 14 NA
823 44.18 precipitation 0.1 43200 > th dose dependent rect. 7 1
827 44.18 humidity 70.0 43200 > th dose dependent rect. 13 12
832 44.19 humidity 60.0 14400 > th dose independent rect. 7 1
855 44.19 humidity 90.0 30 > th dose dependent rect. 8 23
856 44.20 humidity 90.0 43200 < th dose independent sin 12 NA
861 44.20 humidity 90.0 10 < th dose independent rect. 3 6
875 44.20 humidity 90.0 30 > th dose dependent rect. 17 14
884 44.21 wind 1.0 43200 < th dose independent rect. 6 1
913 44.22 wind 1.0 14400 > th dose independent rect. 5 20
971 44.24 humidity 90.0 43200 > th dose independent sin 12 NA
983 44.24 humidity 80.0 43200 < th dose independent rect. 11 14
986 44.24 humidity 80.0 43200 > th dose independent rect. 24 19
988 44.24 humidity 70.0 43200 > th dose dependent sin 17 NA
989 44.24 humidity 90.0 30 > th dose dependent no NA NA