BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0180300 Os08g0180300|AK100130
(1030 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0180300 DEAD/DEAH box helicase, N-terminal domain cont... 1824 0.0
Os04g0629300 DEAD/DEAH box helicase, N-terminal domain cont... 996 0.0
Os01g0779400 SWAP/Surp domain containing protein 729 0.0
Os02g0527100 DEAD/DEAH box helicase, N-terminal domain cont... 331 1e-90
Os07g0642400 DEAD/DEAH box helicase, N-terminal domain cont... 304 2e-82
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 300 5e-81
AK110250 293 4e-79
Os07g0511500 SNF2-related domain containing protein 278 1e-74
Os02g0689800 DEAD/DEAH box helicase domain containing protein 99 2e-20
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 93 1e-18
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 87 7e-17
Os01g0367900 Similar to Possible global transcription activ... 87 1e-16
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 86 1e-16
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 83 1e-15
Os05g0150300 Similar to Possible global transcription activ... 83 1e-15
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 83 1e-15
Os03g0101700 Similar to SNF2P 82 2e-15
Os05g0144300 DEAD/DEAH box helicase, N-terminal domain cont... 82 3e-15
Os07g0680500 Helicase, C-terminal domain containing protein 79 2e-14
Os07g0636200 DEAD/DEAH box helicase, N-terminal domain cont... 78 4e-14
Os01g0952200 Cyclin-like F-box domain containing protein 77 7e-14
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 75 2e-13
AK111184 72 2e-12
Os07g0660200 Similar to Chromodomain-helicase-DNA-binding p... 72 2e-12
>Os08g0180300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1030
Score = 1824 bits (4724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 898/1030 (87%), Positives = 898/1030 (87%)
Query: 1 MLAGNMNNDNYXXXXXXXXXXXXXXXXXXXXXXXQELASSSSRPTENINGQYRTLPPSFT 60
MLAGNMNNDNY QELASSSSRPTENINGQYRTLPPSFT
Sbjct: 1 MLAGNMNNDNYIDLSSDSDIDFDFDSDDSVGGLDQELASSSSRPTENINGQYRTLPPSFT 60
Query: 61 NGRHVDNARHALGSGDRAYPHSSSYRGSPNDSARATPASNRTDIVVKKHNGFASEENDNG 120
NGRHVDNARHALGSGDRAYPHSSSYRGSPNDSARATPASNRTDIVVKKHNGFASEENDNG
Sbjct: 61 NGRHVDNARHALGSGDRAYPHSSSYRGSPNDSARATPASNRTDIVVKKHNGFASEENDNG 120
Query: 121 KRILPSSFSNGRTTNAMHPVVASETRKFPPSFTNGNSQRLAENRMGKNVANGIGEXXXXX 180
KRILPSSFSNGRTTNAMHPVVASETRKFPPSFTNGNSQRLAENRMGKNVANGIGE
Sbjct: 121 KRILPSSFSNGRTTNAMHPVVASETRKFPPSFTNGNSQRLAENRMGKNVANGIGEPSSSR 180
Query: 181 XXXXXXXGTDNKKVITDSDNEDVYVYGSSSSHRVLPPSFGRNSSANHSEFANGIDMQGRL 240
GTDNKKVITDSDNEDVYVYGSSSSHRVLPPSFGRNSSANHSEFANGIDMQGRL
Sbjct: 181 FPSRSSFGTDNKKVITDSDNEDVYVYGSSSSHRVLPPSFGRNSSANHSEFANGIDMQGRL 240
Query: 241 NLENRIIDSDERAVYQEALQNIIQDKREDDLPEGVLSVPLLRHQKMALAWMVSKENSSHC 300
NLENRIIDSDERAVYQEALQNIIQDKREDDLPEGVLSVPLLRHQKMALAWMVSKENSSHC
Sbjct: 241 NLENRIIDSDERAVYQEALQNIIQDKREDDLPEGVLSVPLLRHQKMALAWMVSKENSSHC 300
Query: 301 AGGILADDQGLGKTVSTIALIQKQRIQQSKFMSVDSDRLKXXXXXXXXXXXXXPVADNKG 360
AGGILADDQGLGKTVSTIALIQKQRIQQSKFMSVDSDRLK PVADNKG
Sbjct: 301 AGGILADDQGLGKTVSTIALIQKQRIQQSKFMSVDSDRLKAEALNLDDDDEAAPVADNKG 360
Query: 361 EQTKNDEPRKDLXXXXXXXXXXXXDVETCASLMNTAPDKTVERNVERXXXXXXXXXXXMQ 420
EQTKNDEPRKDL DVETCASLMNTAPDKTVERNVER MQ
Sbjct: 361 EQTKNDEPRKDLGAGSSSTAAGTGDVETCASLMNTAPDKTVERNVERKKKSKASTSSTMQ 420
Query: 421 SMTRPAAGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVIT 480
SMTRPAAGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVIT
Sbjct: 421 SMTRPAAGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVIT 480
Query: 481 TYTIVANEVPKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGP 540
TYTIVANEVPKQNADDDTDQKNGEESSAGN DSDIYLASGP
Sbjct: 481 TYTIVANEVPKQNADDDTDQKNGEESSAGNKRKQPPKAQSKSKKKKKKLKDSDIYLASGP 540
Query: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY
Sbjct: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
Query: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL
Sbjct: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
Query: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGH 720
DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGH
Sbjct: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGH 720
Query: 721 QSEYKGDGSIEMAKQLPKEMIINLLAKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYE 780
QSEYKGDGSIEMAKQLPKEMIINLLAKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYE
Sbjct: 721 QSEYKGDGSIEMAKQLPKEMIINLLAKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYE 780
Query: 781 RITTDENMCPSPNCGNTLSTDSVFSSGALRICMXXXXXXXXXXXXXXXXXXXXXXXXXXX 840
RITTDENMCPSPNCGNTLSTDSVFSSGALRICM
Sbjct: 781 RITTDENMCPSPNCGNTLSTDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYI 840
Query: 841 XXKIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXI 900
KIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGM I
Sbjct: 841 SSKIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGMLDLLELSLNSNLI 900
Query: 901 QYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYA 960
QYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYA
Sbjct: 901 QYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYA 960
Query: 961 EDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLT 1020
EDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLT
Sbjct: 961 EDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLT 1020
Query: 1021 VDDLKYLFRF 1030
VDDLKYLFRF
Sbjct: 1021 VDDLKYLFRF 1030
>Os04g0629300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1051
Score = 996 bits (2575), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/839 (59%), Positives = 601/839 (71%), Gaps = 21/839 (2%)
Query: 203 VYVYGSSSSHRVLPPSFGRNSSANHSEFANGIDMQGRLNLENRIIDSDERAVYQEALQNI 262
V YG +SHR+ PPS N+S N+ NG+ Q LN+E R+ DER VY EAL+ I
Sbjct: 219 VSAYGGLNSHRIFPPSVPYNNSVNNFG-VNGLGTQSHLNIEKRLFGRDERVVYDEALKQI 277
Query: 263 IQDKREDDLPEGVLSVPLLRHQKMALAWMVSKENSSHCAGGILADDQGLGKTVSTIALIQ 322
Q+ E++LPEGV+SV LL+HQ++ALAWMVS+ENSSHC+GGILADDQGLGKT+STIALIQ
Sbjct: 278 SQETTEENLPEGVMSVSLLKHQRIALAWMVSRENSSHCSGGILADDQGLGKTISTIALIQ 337
Query: 323 KQRIQQSKFMSVDSDRLKXXXXXXXXXXXXXPVADNKGEQTKNDEPRKD-LXXXXXXXXX 381
K+R++QSKFMS D +K V D K + ++ +D
Sbjct: 338 KERVEQSKFMSADVGSMKSVANLDEDDEVVI-VMDKKQLKGESVNMLQDSTLFPSSEAAS 396
Query: 382 XXXDVETCASLMNTAPDK---TVERNVERXXXXXXXXXXXMQSMTRPAAGTLVVCPASVL 438
D++ ASL +A D+ V+ ++ ++S R AGTLVVCPASVL
Sbjct: 397 DAADLKPWASLPGSAVDRMVNAVKVEPKKKARVRPSPSSTLRSANRSTAGTLVVCPASVL 456
Query: 439 KQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVANEVPKQNADDDT 498
+QWA+EL KV ES+KLSVLVYHGGSRTKDP EL KYDVV+TTYTIVANEVPKQN D+D
Sbjct: 457 RQWASELAAKVTESSKLSVLVYHGGSRTKDPTELTKYDVVVTTYTIVANEVPKQNFDEDM 516
Query: 499 DQKNGEES------SAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGPVARVRWFRVVLD 552
++KN E S GN L GP+ARVRWFRVVLD
Sbjct: 517 EEKNSETYGLCPAFSIGNKRKKDSEPKKKKKPKNSDAD-----LDGGPLARVRWFRVVLD 571
Query: 553 EAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTYNSFCTM 612
EAQTIKN TQVA+ACCGLRAKRRWCLSGTPIQN ID+LYSYF FLKY+PYS Y SF +M
Sbjct: 572 EAQTIKNHNTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYEPYSVYGSFRSM 631
Query: 613 IKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTKEERAF 672
IK+ I+R+A GYKKLQ VL+IVLLRRTKETLIDGEPIIKLPPKTI L K+DF+KEER F
Sbjct: 632 IKYQISRDATRGYKKLQAVLKIVLLRRTKETLIDGEPIIKLPPKTIQLSKIDFSKEERTF 691
Query: 673 YLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQSEYKGDGSIEM 732
Y+ LEE SR++FK YA+AGT+++N+ANIL++LLRLRQACDHPLL+KG + + GS+E+
Sbjct: 692 YMMLEEGSREKFKEYASAGTIRENFANILVLLLRLRQACDHPLLLKGKEKDLIDTGSVEV 751
Query: 733 AKQLPKEMIINLLAKLEVGEF--CSVCSDVPEDAVVTMCGHVFCYQCIYERITTDENMCP 790
A +LPKE +INLL +LE G++ CS CSD PED VV CGHVFCYQC+++ +T+DEN+CP
Sbjct: 752 ANKLPKETVINLLGQLE-GDYAICSRCSDPPEDVVVATCGHVFCYQCVHKSLTSDENVCP 810
Query: 791 SPNCGNTLSTDSVFSSGALRICMXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXKIQAAID 849
SP+CG LS +VFS G LR C+ KI+A D
Sbjct: 811 SPSCGKKLSAQTVFSPGVLRFCIADKLESGATTSSSVEADGSPSICESSYISSKIRATTD 870
Query: 850 ILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTM 909
ILNSI+NT ALT SDT+ES+PS VAP KAIVFSQWTG+ I++RRLDG M
Sbjct: 871 ILNSIVNTPALTWSDTMESSPSEVAPSKAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAM 930
Query: 910 SLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAH 969
SLN R+ AV++FNTDPEVRVM+MSLKAGNLGLNMVAACHVI++D WWNPYAEDQA+DRAH
Sbjct: 931 SLNLREAAVREFNTDPEVRVMLMSLKAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAH 990
Query: 970 RIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLF 1028
RIGQTRPVTVSRLTIKDTVEDRILALQE+KR MV SAFGEDK GG ATRLT+DDL+YLF
Sbjct: 991 RIGQTRPVTVSRLTIKDTVEDRILALQEKKRKMVQSAFGEDKPGGSATRLTIDDLQYLF 1049
>Os01g0779400 SWAP/Surp domain containing protein
Length = 1213
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/625 (58%), Positives = 439/625 (70%), Gaps = 20/625 (3%)
Query: 424 RPAAGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYT 483
RPAAGTLVVCP SVL+QWA+EL +KV A L+ LVYHG +RTKDPN+L KYDVV+TTY+
Sbjct: 587 RPAAGTLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYS 646
Query: 484 IVANEVPKQNADDDTDQKNGEESSAGNXX--XXXXXXXXXXXXXXXXXXDSDIYLASGPV 541
IV+ EVPKQ++ D D++ G+ G + L P+
Sbjct: 647 IVSMEVPKQSSPDSDDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKLPEKPL 706
Query: 542 ARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYD 601
A+V WFRV+LDEAQ+IKN+RTQVA+AC GLRAKRRWCLSGTPIQNA+++LYSYF FL+YD
Sbjct: 707 AKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYD 766
Query: 602 PYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINLD 661
PY+ Y FC MIK PI+RN + GYKKLQ VL+ V+LRRTK T++DG+PII LPPKT++L
Sbjct: 767 PYAEYKKFCFMIKTPISRNPITGYKKLQVVLKTVMLRRTKATMLDGKPIISLPPKTVSLK 826
Query: 662 KVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQ 721
VDFT EERAFY TLE SR+QFK YAAAGT+KQNY NILLMLLRLRQACDHP LV+GH+
Sbjct: 827 TVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPHLVRGHE 886
Query: 722 SEYKGDGSIEMAKQLPKEMIINLLAKLE-VGEFCSVCSDVPEDAVVTMCGHVFCYQCIYE 780
S S+EMAK+LP E +LL L+ C++C+D PEDAVVT+CGHVFC QCI E
Sbjct: 887 STSSWMSSLEMAKKLPVERQQSLLVCLQSCSAICALCNDAPEDAVVTICGHVFCNQCILE 946
Query: 781 RITTDENMCPSPNCGNTLSTDSVFSSGALRICMXXXXXXXXX--XXXXXXXXXXXXXXXX 838
++T D+++CP NC L++ S+FS G L +
Sbjct: 947 QLTGDDSVCPVSNCRVRLNSTSLFSRGTLECALSRSTCEFLSDDSCEDMVQGKQPRFDSS 1006
Query: 839 XXXXKIQAAIDILNSIIN---TYALTDSDTV--------ESNPSRVAPV----KAIVFSQ 883
K++AA+DIL S+ T+ D + + S PS A KAIVFSQ
Sbjct: 1007 YASSKVRAALDILLSLPKLDLTHMSDDKNKIVHPDKINGNSTPSEYAGTKITEKAIVFSQ 1066
Query: 884 WTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNM 943
WT M + YRRLDGTMS+ +RD+AVKDFNT+PEV VMIMSLKA +LGLNM
Sbjct: 1067 WTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNTNPEVSVMIMSLKAASLGLNM 1126
Query: 944 VAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMV 1003
VAACHV+LLDLWWNP EDQA+DRAHRIGQTRPVTVSRLTIKDTVEDRILALQE+KR MV
Sbjct: 1127 VAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEKKREMV 1186
Query: 1004 SSAFGEDKSGGHATRLTVDDLKYLF 1028
+SAFGEDKSG H TRLTV+DL YLF
Sbjct: 1187 ASAFGEDKSGAHQTRLTVEDLNYLF 1211
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 250 DERAVYQEALQNIIQDKREDDLPEGVLSVPLLRHQKMALAWMVSKE-NSSHCAGGILADD 308
+ER + ALQ+I Q K E + P+GVL+VPLLRHQK+AL+WMV KE N S C+GGILADD
Sbjct: 447 EERMTLRLALQDISQPKSEANPPDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADD 506
Query: 309 QGLGKTVSTIALIQKQR 325
QGLGKTVSTI+LI +R
Sbjct: 507 QGLGKTVSTISLILTER 523
>Os02g0527100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 810
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 190/621 (30%), Positives = 314/621 (50%), Gaps = 101/621 (16%)
Query: 426 AAGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIV 485
A G L+VCP ++L QW E+ + +S+ V++G +R K+ N + + D+V+TTY ++
Sbjct: 272 AGGNLIVCPMTLLGQWKAEI-EAHATPGSVSIYVHYGQNRPKEANLIGQSDIVLTTYGVL 330
Query: 486 ANEVPKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGPVARVR 545
++E +N+ + SG + +
Sbjct: 331 SSEFSNENSTE-----------------------------------------SGGLYSIH 349
Query: 546 WFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYST 605
WFRVVLDEA IK+ ++ ++ A L A RRWCL+GTPIQN ++++YS F FL+ +P+
Sbjct: 350 WFRVVLDEAHMIKSPKSLISLAAAALTADRRWCLTGTPIQNNLEDIYSLFRFLRVEPWRN 409
Query: 606 YNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTK-ETLIDGEPIIKLPPKTINLDKVD 664
++ + +++ P G K +Q++L+ ++LRR K T +G PI+ LPP I + D
Sbjct: 410 WSLWHKLVQKPYEEGDERGLKLVQSILKPIMLRRNKNSTDKEGRPILILPPANIEVKYCD 469
Query: 665 FTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLV--KGHQS 722
++ E+ FY L RS+ +F + G + NYA+IL +LLRLRQ CDHP LV +G
Sbjct: 470 LSETEKDFYDALFRRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVLSRGDTQ 529
Query: 723 EYK------------GDGSIEMAKQLPKEMII-NLLAKLEVGEF-CSVCSDVPEDAVVTM 768
E+ G+G++ LP I ++ +L+ GE C +C + EDAV+T
Sbjct: 530 EFADLNKLAKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKGEGECPICLEAFEDAVLTP 589
Query: 769 CGHVFCYQCIYERI-TTDENMCPSPNCGNTLSTDSVFSSGALRICMXXXXXXXXXXXXXX 827
C H C +C+ + +CP C ++S + ++
Sbjct: 590 CAHRLCRECLLSSWRSASAGLCPV--CRKSMSKQDLITA--------------------- 626
Query: 828 XXXXXXXXXXXXXXXKIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGM 887
+I + + S ++ L + + + R + K+I+FSQWT
Sbjct: 627 ---------PTDNRFQIDVEKNWVESSKISFLLQELEVL-----RTSGAKSIIFSQWTAF 672
Query: 888 XXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAAC 947
+ RLDGT++L R+K +K+F+ D + V++MSLKAG +G+N+ AA
Sbjct: 673 LDLLQIPLSRHNFSFARLDGTLNLQQREKVIKEFSEDKSILVLLMSLKAGGVGINLTAAS 732
Query: 948 HVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAF 1007
+ ++D WWNP E+QAI R HRIGQT+ V++ R +K TVE+R+ A+Q K+ M+S A
Sbjct: 733 NAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEAVQARKQRMISGAL 792
Query: 1008 GEDKSGGHATRLTVDDLKYLF 1028
+ + +++LK LF
Sbjct: 793 TDQE----VRSARIEELKMLF 809
>Os07g0642400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 821
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 298/607 (49%), Gaps = 88/607 (14%)
Query: 429 TLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVANE 488
TLVVCP SV W +L + ++ L V +YHG RTK+ EL KYD+VITTY+ + E
Sbjct: 293 TLVVCPPSVFSSWVTQLEEHT-KTGSLKVYLYHG-ERTKEKKELLKYDIVITTYSTLGQE 350
Query: 489 VPKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGPVARVRWFR 548
+ ++ + PV + WFR
Sbjct: 351 LEQEGS---------------------------------------------PVKEIEWFR 365
Query: 549 VVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTYNS 608
V+LDEA IKN + KA L A+RRW ++GTPIQN+ +LY FL++ P+S +
Sbjct: 366 VILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAFLRFQPFSIKSY 425
Query: 609 FCTMIKHPIAR-NAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTK 667
+ ++I+ P+ R N G +LQ++L + LRRTKET + ++ +PPKT+ ++ +
Sbjct: 426 WQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKETESGSKSLVSIPPKTVLACYIELSA 485
Query: 668 EERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQAC-DHPLLVKGHQSEYKG 726
EER +Y +E + + + + ++ +NY+ +L +LRLRQ C D L +S G
Sbjct: 486 EEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCNDIALCPLDLKSWLPG 545
Query: 727 DG-SIEMAKQLPKEMIINLLAKLEVGE--FCSVCSDVPEDAVVTMCGHVFCYQCIYERIT 783
G S+E + P E++ L + ++ G+ C +C P V+T C H++C CI + +
Sbjct: 546 SGSSLEDVSKNP-ELLKKLASLVDDGDDFECPICLAPPAKTVITSCTHIYCQTCIMKILK 604
Query: 784 TDENMCPSPNCGNTLSTDSVFSSGALRICMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 843
+ + CP C +L + +F + ++ K
Sbjct: 605 SSSSRCPI--CRRSLCKEDLFIAPEIK----------------HPDEDSSVNLDRPLSSK 646
Query: 844 IQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQYR 903
+QA + +L + L+ K+++FSQ+ M
Sbjct: 647 VQALLKLLRRSQSEDPLS---------------KSVIFSQFRKMLILLEGPLKAAGFNIL 691
Query: 904 RLDGTMSLNSRDKAVKDFN-TDPEV-RVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAE 961
RLDG+M+ R + ++ F P+ V++ SLKA G+N+ AA V L D WWNP E
Sbjct: 692 RLDGSMTAKKRSEVIRQFGCVGPDSPTVLLASLKAAGAGVNLTAASTVYLFDPWWNPGVE 751
Query: 962 DQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTV 1021
+QA+DR HRIGQT+ V V RL +KD++E+R+L LQE K+ ++S AFG K G + V
Sbjct: 752 EQAMDRVHRIGQTKEVKVVRLIVKDSIEERMLELQERKKKLISGAFGRKKGGKEHKEIRV 811
Query: 1022 DDLKYLF 1028
++L+ +
Sbjct: 812 EELQMMM 818
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 300 bits (767), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 200/621 (32%), Positives = 294/621 (47%), Gaps = 104/621 (16%)
Query: 427 AGTLVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVA 486
GTL++CP ++L QW +EL A LSV VY+GG RT D +A++ VV+TTY ++
Sbjct: 128 GGTLIICPMALLGQWKDELEAHSTPGA-LSVFVYYGGDRTTDLRFMAQHSVVLTTYGVL- 185
Query: 487 NEVPKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGPVARVRW 546
Q+A KN S R+ W
Sbjct: 186 -----QSA-----HKND---------------------------------GSSIFHRIDW 202
Query: 547 FRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTY 606
+RVVLDEA TIK+ RT+ A+A L + RWCL+GTP+QN +++L+S FL +P+
Sbjct: 203 YRVVLDEAHTIKSPRTKAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLCFLHVEPWGDA 262
Query: 607 NSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLID-GEPIIKLPPKTINLDKVDF 665
+ + +I+ P G K ++ +LR ++LRRTKET G PI+ LPP I + + +
Sbjct: 263 SWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKDKMGNPILVLPPANIEIVECEQ 322
Query: 666 TKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQSEYK 725
+++ER FY L RS+ QF + A G++ NYANIL +LLRLRQ CDHP LV K
Sbjct: 323 SEDERDFYEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFLVISRADTQK 382
Query: 726 GDGSIEMAKQL--------------PKEMIIN-LLAKLEVGEF--CSVCSD-VPEDAVVT 767
E+A++ P + + ++ ++ G C +C + +D V+T
Sbjct: 383 YTDLDELAQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQGATTECPICLESASDDPVLT 442
Query: 768 MCGHVFCYQCIYERITTDENMCPSPNCGNTLSTDSVFSSGALRICMXXXXXXXXXXXXXX 827
C H C +C+ LS+ S G +C
Sbjct: 443 PCAHRMCRECL-------------------LSSWRTPSGGPCPLCRSPITKSELITLPSQ 483
Query: 828 XXXXXXXXXXXXXXXKIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGM 887
K+ I IL + K+IVFSQ+T
Sbjct: 484 CRFQVDPENNWKDSCKVIKLIKILEGLQEKRE-----------------KSIVFSQFTSF 526
Query: 888 XXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAAC 947
I++ R DG +S R+K +K+F+ + V++MSLKAG +GLN+ AA
Sbjct: 527 FDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSESKDKLVLLMSLKAGGVGLNLTAAS 586
Query: 948 HVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAF 1007
+V L+D WWNP E+QAI R HRIGQ R V V R +KDTVE+R+ +Q K+ M+S A
Sbjct: 587 NVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERMQKVQACKQRMISGAL 646
Query: 1008 GEDKSGGHATRLTVDDLKYLF 1028
+D+ ++ LK LF
Sbjct: 647 TDDE----VRSARIEQLKMLF 663
>AK110250
Length = 1046
Score = 293 bits (751), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 294/643 (45%), Gaps = 122/643 (18%)
Query: 430 LVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTKDPNELAKYDVVITTYTIVANEV 489
LVV P + QW NE+ KL VL++HG +RT++ EL DVV+T+Y ++ +
Sbjct: 480 LVVAPTVAIMQWRNEIEQYT--EPKLKVLLWHGPNRTQNLKELKAVDVVLTSYAVLESSF 537
Query: 490 PKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDSDIYLASGPVARVRWFRV 549
KQ + + +E SA + V W R+
Sbjct: 538 RKQESGFRRKNEILKEKSA--------------------------------LHAVHWRRI 565
Query: 550 VLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKYDPYSTYNSF 609
+LDEA IK T AK L+ RWCLSGTP+QN + ELYS FL DP++ Y F
Sbjct: 566 ILDEAHNIKERSTNTAKGAFALQGDFRWCLSGTPLQNRVGELYSMIRFLGGDPFAYY--F 623
Query: 610 C-----------------------TMIKH----------PIARN-AVHG-----YKKLQT 630
C T + H PI R+ A HG +++L+
Sbjct: 624 CKKCPCKSLHWSFSDKRNCDSCGHTPMHHTCYWNNEILKPIQRSGAQHGEGRDAFRRLRI 683
Query: 631 VLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAA 690
+L ++LRRTK D + LPP+TI + + F +EE Y +L + ++F Y
Sbjct: 684 LLERMMLRRTKLERADD---MGLPPRTIEVRRDLFNEEEEDLYTSLYTDTTRKFSTYLDQ 740
Query: 691 GTLKQNYANILLMLLRLRQACDHPLLV----KGHQSEYKGDGSIEMAKQLPKEMIINLLA 746
GT+ NY+NI +L R+RQ +HP LV G S+ GD E+
Sbjct: 741 GTVLNNYSNIFTLLTRMRQLANHPDLVLRSKTGMASKLLGDAQSEI-------------- 786
Query: 747 KLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYERITTDENMCPSPNCGNTLSTDSV-FS 805
C +C+D EDA+++ C H+FC +C+ + + D P+C +T S+
Sbjct: 787 -----HVCRLCTDEAEDAIMSRCKHIFCRECVRQYLDADIEPGAVPDCPYCHATLSIDLE 841
Query: 806 SGALRICMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQAAIDILNSIINTYALTDSDT 865
S AL KI+A ++ L +
Sbjct: 842 SEALE---PPESTIRMNDSGRQGILARLDMDKWRSSTKIEALVEELTQL----------- 887
Query: 866 VESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDP 925
S +K++VFSQ+ Q RL+G MS +R++ +K F +P
Sbjct: 888 ----RSEDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFMENP 943
Query: 926 EVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIK 985
V V ++SLKAG + LN+ A V L+D WWNP E QA+DR HR+G+ RP+ V R+ I+
Sbjct: 944 NVTVFLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGRHRPIIVKRMVIE 1003
Query: 986 DTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLF 1028
+++E RI+ LQ +K AM+ +A G+D G RL+V DL++LF
Sbjct: 1004 NSIESRIIELQNKKSAMIEAAIGKDD--GAVGRLSVSDLRFLF 1044
>Os07g0511500 SNF2-related domain containing protein
Length = 635
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 185/525 (35%), Positives = 252/525 (48%), Gaps = 75/525 (14%)
Query: 540 PVARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLK 599
P+ VRW R++LDEA IK+ R AKA L ++ +W LSGTP+QN + ELYS FL+
Sbjct: 150 PLHSVRWERIILDEAHFIKDRRCNTAKAIFALESEYKWALSGTPLQNRVGELYSLIRFLQ 209
Query: 600 YDPYSTY-------------------------NSFC---TMIKHPI--ARNAVHGYKKL- 628
PYS Y FC I PI + G + +
Sbjct: 210 IFPYSNYFCKDCNCEILDTLLKKQCDCGHSSVRHFCWWNKYISKPIQFGSASFEGKRAMV 269
Query: 629 ---QTVLRIVLLRRTKETLIDGEPIIKLPPKTINLDKVDFTKEERAFYLTLEERSRQQFK 685
+ VL+ ++LRRTK+ + LPPK + L + F K E FY L +SR QF
Sbjct: 270 LLKEKVLKGIVLRRTKKGRAAD---LALPPKIVTLRRDSFDKNEMEFYEALYTQSRTQFD 326
Query: 686 AYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGHQSEYKGDGSIEMAKQLPKEMIINLL 745
+Y AGTL NYA+I +L RLRQA DHP LV ++ E++ + E N+
Sbjct: 327 SYVDAGTLMNNYAHIFDLLTRLRQAVDHPYLVAFSKTA-------ELSDRSKNEGNENME 379
Query: 746 AKLEVGEFCSVCSDVPEDAVVTMCGHVFCYQCIYERITTDENM-CPSPNCGNTLSTDSVF 804
++ C +C D+ EDAVVT C HVFC C+ + T N+ CPS C L+ D
Sbjct: 380 SQ------CGICHDMTEDAVVTSCEHVFCKNCLIDYSATLGNVSCPS--CSVPLTVDLTT 431
Query: 805 SSGALRICMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQAAIDILNSIINTYALTDSD 864
S ++ K ID L I +
Sbjct: 432 RSSGEKV---------TPNLKGGKRSGILSRLQNLADFKTSTKIDALREEIR-------N 475
Query: 865 TVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTD 924
VE + S K IVFSQ+T I+ +L+G M++ + KA+ F D
Sbjct: 476 MVEHDGS----AKGIVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTND 531
Query: 925 PEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTI 984
P+ R+ +MSLKAG + LN+ A HV L+D WWNP E QA DR HRIGQ +P+ R I
Sbjct: 532 PDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVI 591
Query: 985 KDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLFR 1029
KDTVE+RIL LQE+KR + G+ ++LT DLK+LF+
Sbjct: 592 KDTVEERILQLQEKKRLVFEGTVGDSPEA--MSKLTEADLKFLFQ 634
>Os02g0689800 DEAD/DEAH box helicase domain containing protein
Length = 1059
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 936
+A++F+Q T M Y RLDG+ R ++ FNT+P+ + I+S ++
Sbjct: 112 RALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNTNPKFFLFILSTRS 171
Query: 937 GNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQ 996
G +G+N+V A VI D WNP + QA DR HRIGQTR V + RL + T+E+ IL
Sbjct: 172 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 231
Query: 997 EEKRAM 1002
+KRA+
Sbjct: 232 NQKRAL 237
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDF-NTDPEVRVMIMSLK 935
+ ++FSQ T M +Y R+DG SL++R ++++++ N D E + +MS +
Sbjct: 862 RVLIFSQMTRMLDILEDFLCSLGYKYARIDGQTSLSARQESIEEYKNIDSETFIFLMSTR 921
Query: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
AG +G+++ A VI+ D +NP+ + QA RAHRIGQTRPV V +L K +VE++IL
Sbjct: 922 AGGMGVDLPGADRVIIYDPDFNPFMDLQAQSRAHRIGQTRPVVVYQLITKCSVEEKILQK 981
Query: 996 QEEKRAM 1002
++K A+
Sbjct: 982 SKQKLAI 988
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 20/170 (11%)
Query: 847 AIDILNSIINTYALTDSDTVESNPSRVAPVKA--------------------IVFSQWTG 886
ID+L I N L + + NP P ++ ++F+Q
Sbjct: 681 GIDVLRKICNHPDLLEREHAAQNPDYGNPERSGKMKVVEQVLKVWKEQGHRVLLFTQTQQ 740
Query: 887 MXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAA 946
M QYRR+DG R + +FN E+ + I++ K G LG N+ A
Sbjct: 741 MLDIMENFLTACEYQYRRMDGLTPAKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGA 800
Query: 947 CHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQ 996
+I+ D WNP + QA +RA RIGQTR VTV RL + T+E+++ Q
Sbjct: 801 NRIIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGTIEEKVYHRQ 850
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 2/155 (1%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLK 935
+ ++FSQ T + QY R+DG RD +++ FN E V ++S +
Sbjct: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
Query: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
AG LG+N+ A V+L D WNP A+ QA DRAHRIGQ + V V R + T+E++++
Sbjct: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 669
Query: 996 QEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLFRF 1030
+K A+ + + + T + DDL + RF
Sbjct: 670 AYKKLALDALVIQQGRLAEQKT-VNKDDLLQMVRF 703
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
+ R W +++DEA IKN + ++K R ++GTP+QN + EL+S +FL
Sbjct: 348 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 407
Query: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
+ +S+ +F + + ++L VLR LLRR K + G LPPK +
Sbjct: 408 EIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 462
Query: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKG 719
KV ++ ++ +Y L ++ + A G K+ +L + ++LR+ C+HP L +G
Sbjct: 463 LKVGMSQMQKQYYRALLQKD---LEVINAGGERKR----LLNIAMQLRKCCNHPYLFQG 514
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 1/149 (0%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRV-MIMSLK 935
+ +++SQ+ M Y R+DG + R + FN R ++S +
Sbjct: 601 RVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTR 660
Query: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
AG LG+N+ A VI+ D WNP+A+ QA+ RAHR+GQT V + RL + T+E+R++ L
Sbjct: 661 AGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQL 720
Query: 996 QEEKRAMVSSAFGEDKSGGHATRLTVDDL 1024
++K + G G + + +DD+
Sbjct: 721 TKKKMVLEHLVVGRLTKGTNIVQEELDDI 749
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKA 936
K ++FS M + R DGT +N+R + +FN P +V ++S +A
Sbjct: 538 KILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQLLIDEFNRCPSKQVFLISTRA 597
Query: 937 GNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQ 996
GNLG+N+V+A V++ D WNP + QA DR+ R GQ R VTV RL ++E+ I + Q
Sbjct: 598 GNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQRRHVTVFRLLGAGSLEELIYSRQ 657
Query: 997 EEKRAMVSSA 1006
K+ + + A
Sbjct: 658 IYKQQLSNIA 667
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLK 935
+ ++FSQ T + QY R+DG RD +++ FN E V ++S +
Sbjct: 604 RVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 663
Query: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
AG LG+N+ A VIL D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 664 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 723
Query: 996 QEEKRAM 1002
+K A+
Sbjct: 724 AYKKLAL 730
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
+ R W +++DEA IKN + ++K R ++GTP+QN + EL+S +FL
Sbjct: 402 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 461
Query: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
+ +S+ +F + + ++L VLR LLRR K + G LPPK +
Sbjct: 462 EIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 516
Query: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKG 719
KV ++ ++ +Y L ++ + A G K+ +L + ++LR+ C+HP L +G
Sbjct: 517 LKVGMSEMQKQYYRALLQKD---LEVVNAGGERKR----LLNIAMQLRKCCNHPYLFQG 568
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 902 YRRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAE 961
+ R+DG++S+ R A+ FN D V ++S ++ LG+N+ A VI+ D +NP+A+
Sbjct: 335 FERVDGSVSVAERQAAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHAD 394
Query: 962 DQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAF 1007
QA++RAHRIGQ+ + V RL ++ +VE+RIL L +K+ M+ F
Sbjct: 395 IQAMNRAHRIGQSNRLLVYRLVVRASVEERILHLA-KKKLMLDQLF 439
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 88/336 (26%)
Query: 430 LVVCPASVLKQWANELTDKVGESAKLSVLVYHGGSRTK-----------DPNELAK---- 474
LV+ P S + W E + L+V+ YHG +R + D +++ K
Sbjct: 28 LVLVPLSTMPNWMAEFA---SWAPHLNVVEYHGSARARSIIRQYEWHEGDASQMGKIKKS 84
Query: 475 --YDVVITTYTIVANEVPKQNADDDTDQKNGEESSAGNXXXXXXXXXXXXXXXXXXXXDS 532
++V++TTY +V +
Sbjct: 85 HKFNVLLTTYEMVLVDAA------------------------------------------ 102
Query: 533 DIYLASGPVARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELY 592
YL S V W +++DE +KN +++ L + R L+GTP+QN I E+Y
Sbjct: 103 --YLRS-----VSWEVLIVDEGHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMY 155
Query: 593 SYFHFLKYDPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIK 652
+ +FL+ + + SF V ++L+ ++ +LRR K+ + +
Sbjct: 156 NLLNFLQPASFPSLASFEEKFNDLTTTEKV---EELKNLVAPHMLRRLKK-----DAMQN 207
Query: 653 LPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACD 712
+PPKT + V+ T + +Y + ++ Q + G + ++L ++++LR+ C+
Sbjct: 208 IPPKTERMVPVELTSIQAEYYRAMLTKNYQVLRNIGKGGA----HQSLLNIVMQLRKVCN 263
Query: 713 HPLLVKGHQSEYKGDGSIEMAKQLPKEMIINLLAKL 748
HP L+ G + E GS E EM I AKL
Sbjct: 264 HPYLIPGTEPE---SGSPEFL----HEMRIKASAKL 292
>Os03g0101700 Similar to SNF2P
Length = 842
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 21/224 (9%)
Query: 541 VARVRWFRVVLDEAQTIKNFRTQVAKAC-CGLRAKRRWCLSGTPIQNAIDELYSYFHFLK 599
++++ W VV+DEAQ +KN + + RR L+GTPIQN + EL++ HF
Sbjct: 119 LSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCM 178
Query: 600 YDPYSTYNSFCTMIKHPIARNAVHG---------YKKLQTVLRIVLLRRTKETLIDGEPI 650
+ T + F + K + +++ G +K L+ VLR +LRRTK LI I
Sbjct: 179 PSIFGTLDQFLSTFKQ--SGDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQS-GI 235
Query: 651 IKLPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQA 710
+ LP T V T ++ YL++ + Q + + Q+ NI +++LR+A
Sbjct: 236 LALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTFTGGLSRHQSLQNI---VIQLRKA 292
Query: 711 CDHPLLVKGHQSE--YKGDGSIEMAKQLPKEMIINLLAKL-EVG 751
HP L G + E +G+ ++ + +L M+ +L KL EVG
Sbjct: 293 SSHPYLFSGIEPEPYVEGEHLVQASGKLV--MLDLILKKLHEVG 334
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTDPE---VR----- 928
+ ++F+Q T Y RLDG++ R A+K F++ P VR
Sbjct: 336 RVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDDNQS 395
Query: 929 ---VMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIK 985
V ++S +AG +GLN++ A VI + WNP A+ QA+ RAHRIGQ V L +
Sbjct: 396 GAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLSINLVSQ 455
Query: 986 DTVEDRILALQEEKRAMVSSAFGED 1010
T+E+ I+ E K + S GE+
Sbjct: 456 RTIEEVIMRRAERKLKLSHSVIGEE 480
>Os05g0144300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1128
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLK 935
+ ++FSQ T + +Y RLDG+ R + + DFN D E + ++S +
Sbjct: 765 RVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTR 824
Query: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
AG LGLN+ A VI+ D WNP + QA DRAHRIGQ V V L ++E+ IL
Sbjct: 825 AGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDR 884
Query: 996 QEEK 999
++K
Sbjct: 885 AKQK 888
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCG-LRAKRRWCLSGTPIQNAIDELYSYFHFLK 599
+ +V W +++DE +KN +A+ + +RR L+GTPIQN++ EL+S +F+
Sbjct: 558 LKKVHWHYLIVDEGHRLKNHECALARTLVSRYQIRRRLLLTGTPIQNSLQELWSLLNFIL 617
Query: 600 YDPYSTYNSFCTMIKHPIA-------RNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIK 652
+ +++ +F P A + +L VLR LLRR K+ E
Sbjct: 618 PNIFNSSQNFEEWFNAPFACEVSLNDEEQLLIIHRLHQVLRPFLLRRKKD-----EVEKY 672
Query: 653 LPPKTINLDKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACD 712
LP KT + K D + ++A+Y + R + + L QN + ++LR+ C+
Sbjct: 673 LPVKTQVILKCDMSAWQKAYYEQVTSNGRVSLGSGLKSKAL-QNLS------MQLRKCCN 725
Query: 713 HPLLVKGHQSEYKGDGSIEMAKQLPKEMIINLLAKLE 749
HP L H + Y+ + + + E++ LL KL+
Sbjct: 726 HPYLFVEHYNMYQRQEIVRSSGKF--ELLDRLLPKLQ 760
>Os07g0680500 Helicase, C-terminal domain containing protein
Length = 184
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 904 RLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQ 963
+ G S S +KA K F+ +V++M ++ G GLN++ A HVIL++ NP AE Q
Sbjct: 13 QFKGLASSISGEKAKKSFSKMQPAQVLLMLIQHGANGLNLLEAQHVILVEPLLNPAAEAQ 72
Query: 964 AIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATRLTVDD 1023
AI R HR+GQ + + R +K+T+E+ I L RA+ S+ + K+ LT+ D
Sbjct: 73 AISRIHRVGQDKSTFIHRFIVKNTIEESIYKL-NRGRAVCSTIHRKSKNFKDELVLTLKD 131
Query: 1024 LKYLF 1028
++ LF
Sbjct: 132 IESLF 136
>Os07g0636200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 747
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 843 KIQAAIDILNSIINTYALTDSDTVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQY 902
KI A +D L +II A K ++F+ M ++
Sbjct: 553 KIPAVLDYLGTIIE-----------------AECKFLIFAHHQSMLEAIHQHLLKKKVKC 595
Query: 903 RRLDGTMSLNSRDKAVKDFNTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAED 962
R+DG + R V DF +++ ++S+KAG +GL + AA VI +L W P
Sbjct: 596 IRIDGQTPVPVRQTLVTDFQNKDDIKAAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLI 655
Query: 963 QAIDRAHRIGQTRPVTVSRLTIKDTVEDRI 992
QA DRAHRIGQ V + L DTV+D I
Sbjct: 656 QAEDRAHRIGQVSSVNIYYLLANDTVDDII 685
>Os01g0952200 Cyclin-like F-box domain containing protein
Length = 1298
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 1/140 (0%)
Query: 862 DSDTVESNPSRVAPVKAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDF 921
D + VE P K I+FSQ+ I Y + M L S+ ++ F
Sbjct: 1113 DHNNVEGRLPHTMPDKVIIFSQFLEHIHVIEQQLTIGGITYAGMYSPMPLGSKRSSLTKF 1172
Query: 922 NTDPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSR 981
DP ++M A LGL++ +V L++ W+ E+Q I RAHR+G TRP+ V
Sbjct: 1173 KDDPACMALVMDGTAA-LGLDLSFVSYVFLMEPIWDRSMEEQVISRAHRMGATRPIFVET 1231
Query: 982 LTIKDTVEDRILALQEEKRA 1001
L ++ T+E+++L L ++ A
Sbjct: 1232 LAMRGTIEEQMLKLLQDSNA 1251
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 7/132 (5%)
Query: 902 YRRLDGTMSLNSRDKAVKDFNTDPE---VRVMIMSLKAGNLGLNMVAACHVILLDLWWNP 958
+ R+DG+ + R V+ FN DPE V+ ++S +AG +G+N+ +A VILLD WNP
Sbjct: 1171 WYRIDGSTPSSERQNLVERFN-DPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNP 1229
Query: 959 YAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMVSSAFGEDKSGGHATR 1018
+ QAI R R GQT+PV RL T+E++I Q K + + + +
Sbjct: 1230 THDLQAIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQV---SRT 1286
Query: 1019 LTVDDLKYLFRF 1030
++ +++ +LF F
Sbjct: 1287 ISKEEMLHLFEF 1298
>AK111184
Length = 1028
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 877 KAIVFSQWTGMXXXXXXXXXXXXIQYRRLDGTMSLNSRDKAVKDFNTD--PEVRVMIMSL 934
K ++ S +T Y RLDG + R V FN D V ++S
Sbjct: 686 KVVLVSNFTSTLDIVEAMMRKKRYSYLRLDGKTPQDERMDMVNQFNRDGVDSSFVFLLSA 745
Query: 935 KAGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILA 994
K+G +GLN++ A ++L+D WNP + QA+ R HR GQ + + RL + T++++I
Sbjct: 746 KSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGTMDEKIYQ 805
Query: 995 LQEEKRAMVSSAFGEDKS 1012
Q K + S DKS
Sbjct: 806 RQISKLGLTDSLIKGDKS 823
>Os07g0660200 Similar to Chromodomain-helicase-DNA-binding protein, CHD-1-related
Length = 604
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 900 IQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLKAGNLGLNMVAACHVILLDLWWNP 958
Q++RLDG+ + R +A++ FN + ++S +AG LG+N+ A VI+ D WNP
Sbjct: 17 FQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNP 76
Query: 959 YAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRAMV 1003
+ QA+ RAHRIGQ V + R +VE+ I L+ K+ MV
Sbjct: 77 QNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDI--LERAKKKMV 119
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 30,266,181
Number of extensions: 1161230
Number of successful extensions: 3303
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 3267
Number of HSP's successfully gapped: 39
Length of query: 1030
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 919
Effective length of database: 11,240,047
Effective search space: 10329603193
Effective search space used: 10329603193
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 161 (66.6 bits)