BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0329200 Os06g0329200|AK068852
(225 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0329200 Nucleic acid-binding, OB-fold domain containin... 463 e-131
Os01g0390300 Nucleic acid-binding, OB-fold domain containin... 225 2e-59
Os12g0454300 Protein of unknown function DUF889, eukaryote ... 209 9e-55
Os01g0184300 Nucleic acid-binding, OB-fold domain containin... 208 2e-54
Os10g0194001 204 6e-53
Os03g0429900 Nucleic acid-binding, OB-fold domain containin... 202 2e-52
Os10g0107100 184 4e-47
Os07g0651500 Protein of unknown function DUF889, eukaryote ... 183 9e-47
Os08g0333300 183 1e-46
Os11g0625600 171 5e-43
Os11g0243100 171 5e-43
Os07g0113000 Protein of unknown function DUF889, eukaryote ... 166 2e-41
Os12g0539300 155 2e-38
Os01g0383200 152 3e-37
Os01g0932000 Nucleic acid-binding, OB-fold domain containin... 140 6e-34
Os04g0300175 Protein of unknown function DUF889, eukaryote ... 129 2e-30
Os12g0511700 128 3e-30
Os07g0418100 Protein of unknown function DUF889, eukaryote ... 124 4e-29
Os01g0223400 Nucleic acid-binding, OB-fold domain containin... 123 1e-28
Os09g0456900 Nucleic acid-binding, OB-fold domain containin... 122 2e-28
Os01g0244200 Triosephosphate isomerase family protein 121 3e-28
Os10g0502700 118 3e-27
Os04g0362550 112 1e-25
Os01g0556600 Protein of unknown function DUF889, eukaryote ... 111 4e-25
Os02g0295300 110 1e-24
Os10g0377500 109 1e-24
Os12g0159100 Nucleic acid-binding, OB-fold domain containin... 108 3e-24
Os07g0642100 Nucleic acid-binding, OB-fold domain containin... 100 9e-22
Os11g0475900 98 5e-21
Os01g0175300 Nucleic acid-binding, OB-fold domain containin... 87 1e-17
Os03g0181900 86 2e-17
Os01g0838100 Nucleic acid-binding, OB-fold domain containin... 86 2e-17
Os03g0855700 Nucleic acid-binding, OB-fold domain containin... 79 4e-15
>Os06g0329200 Nucleic acid-binding, OB-fold domain containing protein
Length = 225
Score = 463 bits (1191), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 1 MVLEPVHQHSKGLPRRQLACGPPYLSFAFWIDSFVSSLSRPPLVLASSLLSHGVRGPLRP 60
MVLEPVHQHSKGLPRRQLACGPPYLSFAFWIDSFVSSLSRPPLVLASSLLSHGVRGPLRP
Sbjct: 1 MVLEPVHQHSKGLPRRQLACGPPYLSFAFWIDSFVSSLSRPPLVLASSLLSHGVRGPLRP 60
Query: 61 RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY 120
RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY
Sbjct: 61 RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY 120
Query: 121 PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS 180
PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS
Sbjct: 121 PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS 180
Query: 181 ITFSLTPFQDVPSLVEKNHFYVGASPFDHICHLCLFPVAALYLSN 225
ITFSLTPFQDVPSLVEKNHFYVGASPFDHICHLCLFPVAALYLSN
Sbjct: 181 ITFSLTPFQDVPSLVEKNHFYVGASPFDHICHLCLFPVAALYLSN 225
>Os01g0390300 Nucleic acid-binding, OB-fold domain containing protein
Length = 185
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/139 (74%), Positives = 119/139 (85%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+AY+LIS L+YGD K+IK R+SR WD+HD+NDE KIYHT+LVLLDE G SIHVQIYP
Sbjct: 1 MAYVLISDLMYGDTDKRIKARVSRQWDYHDLNDETKIYHTDLVLLDEKGNSIHVQIYPPA 60
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
K + LLQ+GKVYY DSFSVRYANRTYRPV NPLMISFTKWTTLEECI+ D+FP+ITF
Sbjct: 61 MIKLRTLLQEGKVYYFDSFSVRYANRTYRPVTNPLMISFTKWTTLEECIDAFDDFPAITF 120
Query: 184 SLTPFQDVPSLVEKNHFYV 202
SLTPFQD PSLV++N FYV
Sbjct: 121 SLTPFQDAPSLVDRNAFYV 139
>Os12g0454300 Protein of unknown function DUF889, eukaryote family protein
Length = 1051
Score = 209 bits (533), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 137/191 (71%), Gaps = 10/191 (5%)
Query: 13 LPRRQLACGPPYLSFAFWID-SFVSSLSRPPLVLASSLLSHGVRGPLRPRLTIAYILISQ 71
L RRQ P + +A I+ S +L R + L + +HG +A+ILISQ
Sbjct: 493 LQRRQF---PIRVCYAMTINKSQGQTLQRVGVYLRKPVFTHG------QLFQMAHILISQ 543
Query: 72 LLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLL 131
L GD + +IK R+SRLWDFHD+ND+ KI HT+LVLLDETG SIH Q+Y + K LL
Sbjct: 544 LSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLL 603
Query: 132 QQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQDV 191
Q+GKVYYIDSF+VRYANRTYRPVA+ MI FTKWTTLEEC+++P +FP+ITFSLTPF DV
Sbjct: 604 QEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDV 663
Query: 192 PSLVEKNHFYV 202
PSLV+KN FYV
Sbjct: 664 PSLVDKNIFYV 674
>Os01g0184300 Nucleic acid-binding, OB-fold domain containing protein
Length = 168
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/139 (71%), Positives = 118/139 (84%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+A+ILISQL GD + +IK R+SRLWDFHD+ND+ KI HT+LVLLDETG SIH Q+Y +
Sbjct: 1 MAHILISQLSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHV 60
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
K LLQ+GKVYYIDSF+VRYANRTYRPVA+ LMI FTKWTTLEEC+++P +FP+ITF
Sbjct: 61 IVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSLMILFTKWTTLEECVDVPADFPAITF 120
Query: 184 SLTPFQDVPSLVEKNHFYV 202
SLTPF DVPSLV+KN FYV
Sbjct: 121 SLTPFGDVPSLVDKNIFYV 139
>Os10g0194001
Length = 495
Score = 204 bits (518), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/139 (69%), Positives = 117/139 (84%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+A++LISQL +GD +K+I R+SRLW+F D+ND+ KI+HT+LVLLDE G SIH QIYP +
Sbjct: 1 MAHVLISQLSFGDSNKRIHARVSRLWNFTDLNDDTKIFHTDLVLLDEIGTSIHAQIYPPI 60
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
K K LL++ KVYYIDSF++R ANRTYRPVAN LMI F+KWTTLEE I +P +FPSITF
Sbjct: 61 TEKMKPLLKEEKVYYIDSFTIRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPSITF 120
Query: 184 SLTPFQDVPSLVEKNHFYV 202
SLTPF+DVPSLVEKN FYV
Sbjct: 121 SLTPFEDVPSLVEKNSFYV 139
>Os03g0429900 Nucleic acid-binding, OB-fold domain containing protein
Length = 187
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 121/151 (80%), Gaps = 4/151 (2%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+A++LISQL +GD +K+I R+SRLW+F D+N+ KI+HT+LVLLDE G SIH QIYP +
Sbjct: 1 MAHVLISQLSFGDSNKRILARVSRLWNFTDLNNHTKIFHTDLVLLDEMGTSIHAQIYPPI 60
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
K K LL++ KVYYIDSF+VR ANRTYRPVAN LMI F+KWTTLEE I +P +FP ITF
Sbjct: 61 TEKMKPLLKEEKVYYIDSFTVRAANRTYRPVANNLMILFSKWTTLEEHINVPPHFPGITF 120
Query: 184 SLTPFQDVPSLVEKNHFYVGASPFDHICHLC 214
SLTPF+DVPSLVEKN FYVG ++I LC
Sbjct: 121 SLTPFEDVPSLVEKNSFYVG----NNILLLC 147
>Os10g0107100
Length = 794
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 106/131 (80%)
Query: 72 LLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLL 131
L +GD +K+I R+SRLW+F D+ND+ KI+HT+LVLLDE G SIH QIYP + K K LL
Sbjct: 404 LSFGDSNKRILARVSRLWNFTDLNDDTKIFHTDLVLLDEMGTSIHAQIYPPITEKMKPLL 463
Query: 132 QQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQDV 191
++ KVYYIDSF+VR ANRTYR VAN LMI F+KWTTLEE I +P +FP ITFSLTPF+DV
Sbjct: 464 KEEKVYYIDSFTVRAANRTYRLVANNLMILFSKWTTLEEHINVPPHFPGITFSLTPFEDV 523
Query: 192 PSLVEKNHFYV 202
PSLVEK FYV
Sbjct: 524 PSLVEKKSFYV 534
>Os07g0651500 Protein of unknown function DUF889, eukaryote family protein
Length = 2021
Score = 183 bits (464), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 109/143 (76%)
Query: 61 RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY 120
R +A++LISQL GD++ +I R+SRLWDF D+N I+HT+LVLLD+ G SIH QIY
Sbjct: 1621 RSKMAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIY 1680
Query: 121 PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS 180
P + + LL++ KVYYIDSF+VRYANRTYRPV N LMI F+KWTT EE IE +FP
Sbjct: 1681 PPAIDSLRPLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPG 1740
Query: 181 ITFSLTPFQDVPSLVEKNHFYVG 203
ITFSLTPF D+P+LV+K FYVG
Sbjct: 1741 ITFSLTPFSDIPNLVDKTIFYVG 1763
>Os08g0333300
Length = 2183
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 109/143 (76%)
Query: 61 RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY 120
R +A++LISQL GD++ +I R+SRLWDF D+N I+HT+LVLLD+ G SIH QIY
Sbjct: 1584 RSKMAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHTDLVLLDQMGNSIHAQIY 1643
Query: 121 PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS 180
P + + LL++ KVYYIDSF+VRYANRTYRPV N LMI F+KWTT EE IE +FP
Sbjct: 1644 PPAIDSLRPLLKEQKVYYIDSFTVRYANRTYRPVDNSLMIVFSKWTTFEEYIEPAADFPG 1703
Query: 181 ITFSLTPFQDVPSLVEKNHFYVG 203
ITFSLTPF D+P+LV+K FYVG
Sbjct: 1704 ITFSLTPFSDIPNLVDKTIFYVG 1726
>Os11g0625600
Length = 2171
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 113/160 (70%), Gaps = 4/160 (2%)
Query: 44 VLASSLLSHGVRGPLRPRLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHT 103
++ S +LS V+ + +A++LISQL GD++ +I R+SRLWDF D+N I+HT
Sbjct: 1559 IVYSEVLSATVQAVISRTSKMAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHT 1618
Query: 104 ELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFT 163
+LVLLD+ G SIH QIYP + + LL++ KVYYIDSF+V RTYRPV N LMI F+
Sbjct: 1619 DLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTV----RTYRPVDNSLMIVFS 1674
Query: 164 KWTTLEECIEIPDNFPSITFSLTPFQDVPSLVEKNHFYVG 203
KWTT EE IE +FP ITFSLTPF D+P+LV+K FYVG
Sbjct: 1675 KWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVG 1714
>Os11g0243100
Length = 2171
Score = 171 bits (432), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 113/160 (70%), Gaps = 4/160 (2%)
Query: 44 VLASSLLSHGVRGPLRPRLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHT 103
++ S +LS V+ + +A++LISQL GD++ +I R+SRLWDF D+N I+HT
Sbjct: 1559 IVYSEVLSATVQAVISRTSKMAHVLISQLSCGDLNTRILARVSRLWDFCDLNGSGNIFHT 1618
Query: 104 ELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFT 163
+LVLLD+ G SIH QIYP + + LL++ KVYYIDSF+V RTYRPV N LMI F+
Sbjct: 1619 DLVLLDQMGNSIHAQIYPPAIDSLRPLLKEQKVYYIDSFTV----RTYRPVDNSLMIVFS 1674
Query: 164 KWTTLEECIEIPDNFPSITFSLTPFQDVPSLVEKNHFYVG 203
KWTT EE IE +FP ITFSLTPF D+P+LV+K FYVG
Sbjct: 1675 KWTTFEEYIEPAADFPGITFSLTPFSDIPNLVDKTIFYVG 1714
>Os07g0113000 Protein of unknown function DUF889, eukaryote family protein
Length = 1790
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 106/146 (72%)
Query: 62 LTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYP 121
+T+ I +L GD + ++ R+SRLW+F D D KIYH +LVL+DE G SIH QI+P
Sbjct: 1218 ITMGDTSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFP 1277
Query: 122 SLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSI 181
L FK LL +GKVYY+DS+ V+ +N++YRPVANPLM++FTKWT++E+C+++P NFP++
Sbjct: 1278 PLLQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTV 1337
Query: 182 TFSLTPFQDVPSLVEKNHFYVGASPF 207
++LTP +V + V+KN +V F
Sbjct: 1338 VYTLTPLNEVSNFVDKNESFVDVIGF 1363
>Os12g0539300
Length = 1822
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 100/148 (67%)
Query: 48 SLLSHGVRGPLRPRLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVL 107
+++ H + + + + ILIS L+ GD ++++ RLSRLWDF D DE +H +L+L
Sbjct: 1364 NVVYHEILAATQAAVDMGEILISDLICGDENERLCVRLSRLWDFCDAKDESNFFHKDLLL 1423
Query: 108 LDETGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTT 167
LD G SIH I+P L K+K LL +GKVYY+ S++V+Y NR YRPV N +MI FT WT
Sbjct: 1424 LDAKGNSIHAHIFPPLTEKYKPLLTEGKVYYLHSYTVKYGNRLYRPVPNEMMILFTTWTE 1483
Query: 168 LEECIEIPDNFPSITFSLTPFQDVPSLV 195
+EECI P FP+I +SLT + DVP+LV
Sbjct: 1484 IEECIGGPAGFPTIVYSLTSYNDVPNLV 1511
>Os01g0383200
Length = 1741
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 82/93 (88%)
Query: 110 ETGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLE 169
+ G+SIHVQIYPS+ N+FK +L +GKVYYIDSFSV+YANRTYRPV N LMI FTKWTTLE
Sbjct: 1248 DQGSSIHVQIYPSVMNRFKSVLHEGKVYYIDSFSVKYANRTYRPVTNLLMILFTKWTTLE 1307
Query: 170 ECIEIPDNFPSITFSLTPFQDVPSLVEKNHFYV 202
ECI++ ++P ITFSLTPFQD+PSL++KN FY+
Sbjct: 1308 ECIDVLGDYPGITFSLTPFQDIPSLIDKNTFYI 1340
>Os01g0932000 Nucleic acid-binding, OB-fold domain containing protein
Length = 129
Score = 140 bits (354), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 95/137 (69%), Gaps = 14/137 (10%)
Query: 69 ISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFK 128
I +L GD + ++ R+SRLW+F D D KIYH +LVL+DE FK
Sbjct: 6 IDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDE--------------KVFK 51
Query: 129 DLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPF 188
LL +GKVYY+DS+ V+ +N++YRPVANPLM++FTKWT++E+C+++P NFP++ +SLTP
Sbjct: 52 PLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYSLTPL 111
Query: 189 QDVPSLVEKNHFYVGAS 205
+V + V+KN +VG +
Sbjct: 112 NEVSNFVDKNESFVGKT 128
>Os04g0300175 Protein of unknown function DUF889, eukaryote family protein
Length = 1718
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 86/135 (63%)
Query: 68 LISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKF 127
LISQL G RLSR+W F D +DE K+ H LVL+DETG SI QI+P + F
Sbjct: 1405 LISQLELGGSKSCHCIRLSRMWKFCDASDETKLLHKALVLVDETGNSISAQIFPDINEIF 1464
Query: 128 KDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTP 187
+ LL +GK+YY+ + V+ N+ YRPVAN IS TKWT +EE +E P +FPS ++L
Sbjct: 1465 EPLLTEGKIYYLAYYRVKPRNKIYRPVANKFAISLTKWTKVEEYLEPPSSFPSYVYTLKS 1524
Query: 188 FQDVPSLVEKNHFYV 202
F + PSLV+K ++
Sbjct: 1525 FNEFPSLVDKKDSFI 1539
>Os12g0511700
Length = 1312
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 91/142 (64%)
Query: 61 RLTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIY 120
+ + + I+ L D + ++ R+SRLW++HD NDE ++H LVL+D+ G+SI IY
Sbjct: 607 KAKMGELQIASLELSDGNPTLRIRISRLWEYHDQNDETNLHHIGLVLVDQKGSSIAAMIY 666
Query: 121 PSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPS 180
P KFK L+ +GKVY + + V+ + Y PV N L I+FT W+T+EEC+++PDNF
Sbjct: 667 PPCDKKFKPLITEGKVYLLTYYRVKPCTKHYWPVDNKLAITFTWWSTVEECVDVPDNFAQ 726
Query: 181 ITFSLTPFQDVPSLVEKNHFYV 202
+SLTPF ++ SLV++ +
Sbjct: 727 YAYSLTPFNELRSLVDRKDSFT 748
>Os07g0418100 Protein of unknown function DUF889, eukaryote family protein
Length = 2266
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 90/139 (64%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+ + I+ L GD + ++ R+SRLW++ D NDE +++ LVL+D+ G+SI IYP
Sbjct: 1435 MGGLQIASLEPGDGNPTLRIRISRLWEYRDQNDESILHYIGLVLVDQKGSSIAAMIYPPC 1494
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
NKFK L+ +GKVY + + V+ + YRPV N L I+FT W+T+EEC+++PDNF +
Sbjct: 1495 DNKFKPLITEGKVYLLTYYRVKPCTKHYRPVDNKLAITFTWWSTVEECVDVPDNFAQYAY 1554
Query: 184 SLTPFQDVPSLVEKNHFYV 202
SL PF ++ S V++ +
Sbjct: 1555 SLKPFNELRSHVDRKDSFT 1573
>Os01g0223400 Nucleic acid-binding, OB-fold domain containing protein
Length = 249
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 85/138 (61%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+ + L+S L GD +++I R+SR W F D D++KI H LVL+DE G SI QIYP
Sbjct: 11 MGHTLLSDLSLGDDNERICVRVSRFWAFCDQKDDDKILHFGLVLIDEKGTSIAAQIYPPC 70
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
F+ ++ +GKVYYI F VR NR Y+PV N + I FT+WT LEE ++ P P T+
Sbjct: 71 DEIFRPIITEGKVYYIKYFRVRKCNRQYKPVDNCMSIYFTRWTKLEERVDPPAEIPLYTY 130
Query: 184 SLTPFQDVPSLVEKNHFY 201
SL+PF + S V K +
Sbjct: 131 SLSPFGGLRSRVGKKDSF 148
>Os09g0456900 Nucleic acid-binding, OB-fold domain containing protein
Length = 206
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 83/137 (60%)
Query: 68 LISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKF 127
LIS+L G + I+ R+SR W+F D NDE +YH LVL+D TGASI QI P L F
Sbjct: 19 LISKLEPGLGNPTIRLRVSRFWEFRDQNDENILYHLGLVLVDGTGASIAAQIMPPLDELF 78
Query: 128 KDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTP 187
+ +GKVY + + VR YRPV N I+ TKW+TLEEC ++P+NFP+ +SLTP
Sbjct: 79 APAITEGKVYDLTFYRVRQCTSQYRPVGNMQSIALTKWSTLEECTDVPENFPNYVYSLTP 138
Query: 188 FQDVPSLVEKNHFYVGA 204
+ + V + + A
Sbjct: 139 YDQLRGRVNRKDSFTDA 155
>Os01g0244200 Triosephosphate isomerase family protein
Length = 2498
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 91/142 (64%)
Query: 62 LTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYP 121
+AY ++S+L G + +I R+SRLW+F + NDE ++ H LVL+D+ G SI QIYP
Sbjct: 1661 FAMAYSMLSKLELGADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQEGTSIAAQIYP 1720
Query: 122 SLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSI 181
+F++++ +GKVYY++ + VR +R YRPV N L I FT+WT +E+ + +FP
Sbjct: 1721 PCDLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWTKVEQVADPAADFPLY 1780
Query: 182 TFSLTPFQDVPSLVEKNHFYVG 203
T+SLTP+ + V++ + G
Sbjct: 1781 TYSLTPYGGLRQRVDRKEEFTG 1802
>Os10g0502700
Length = 1169
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 90/142 (63%)
Query: 62 LTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYP 121
+AY ++S+L + +I R+SRLW+F + NDE ++ H LVL+D+ G SI QIYP
Sbjct: 332 FAMAYSMLSKLELCADNPRICVRVSRLWEFANPNDETQLLHLGLVLIDQEGTSIAAQIYP 391
Query: 122 SLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSI 181
+F++++ +GKVYY++ + VR +R YRPV N L I FT+WT +E+ + +FP
Sbjct: 392 PCDLQFREIITEGKVYYLEYYRVREWSRRYRPVNNSLSICFTRWTKVEQVADPAADFPLY 451
Query: 182 TFSLTPFQDVPSLVEKNHFYVG 203
T+SLTP+ + V++ + G
Sbjct: 452 TYSLTPYGGLRQRVDRKEEFTG 473
>Os04g0362550
Length = 1410
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 88/141 (62%)
Query: 62 LTIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYP 121
+ + + +IS+L G + +I RLSR+W+F+D D+ + H LVL+DET SI QI+P
Sbjct: 629 IEMDHCIISKLEPGLGNPRIYVRLSRMWNFNDPKDDISLLHVALVLVDETEGSIAAQIFP 688
Query: 122 SLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSI 181
FK LL +GK+YY+ + VR +R+Y+PV+N L I+FT WT +EE + P +FP
Sbjct: 689 PDGKLFKPLLSEGKIYYLTHYIVRNCSRSYKPVSNSLAIAFTGWTIVEEYVNAPTSFPFY 748
Query: 182 TFSLTPFQDVPSLVEKNHFYV 202
T+SL F + +L++ +
Sbjct: 749 TYSLKSFNQLTALLDNKDSFT 769
>Os01g0556600 Protein of unknown function DUF889, eukaryote family protein
Length = 1932
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 85/140 (60%)
Query: 63 TIAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPS 122
++ + I L GD + + R+SRLW++HD +DE + H LVL+ E G +I IYP
Sbjct: 1169 SMQWDKIPNLELGDGNPTLLVRVSRLWEYHDQDDEGDLRHIGLVLVGEKGYAIAAMIYPP 1228
Query: 123 LRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSIT 182
KFK L+ +GKVY + + V+ + YRPV N +MI+FT+WT +EE +++ F
Sbjct: 1229 WGKKFKPLISEGKVYLLTYYRVKPCTKHYRPVDNKMMINFTRWTGIEEYVDVQAGFGHYA 1288
Query: 183 FSLTPFQDVPSLVEKNHFYV 202
++LTP+Q++ S V++ +
Sbjct: 1289 YTLTPYQELRSRVDRKDSFT 1308
>Os02g0295300
Length = 2169
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 81 IKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVYYID 140
I+ R+SR W F D NDE ++H LVLLD TGASI QI+P L F+ + +GKVY +
Sbjct: 1009 IRVRVSRFWAFRDQNDESNLHHLGLVLLDRTGASIAAQIFPPLDELFQPQITEGKVYDLT 1068
Query: 141 SFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQ--DVPS 193
+ VR YRPV+N ISFTKW+TLEEC ++ ++FP+I + P + D+P+
Sbjct: 1069 FYRVRQCTSQYRPVSNMQSISFTKWSTLEECNDVLEDFPNIKGNYEPIKYIDLPA 1123
>Os10g0377500
Length = 1414
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 84/140 (60%), Gaps = 14/140 (10%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSL 123
+ + I+ L GD + ++ R+S LW++HD NDE ++H LVL+D+
Sbjct: 752 MGELQIASLELGDGNPTLRIRISWLWEYHDQNDETNLHHIGLVLVDQ------------- 798
Query: 124 RNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITF 183
KFK L+ +GKVY + + V+ + Y PV N L I+FT W+T+EEC+++PDNF +
Sbjct: 799 -KKFKPLITEGKVYLLTYYRVKPCTKHYWPVDNKLAITFTWWSTVEECVDVPDNFAQYAY 857
Query: 184 SLTPFQDVPSLVEKNHFYVG 203
SLTPF ++ SLV++ + G
Sbjct: 858 SLTPFNELRSLVDRKDSFTG 877
>Os12g0159100 Nucleic acid-binding, OB-fold domain containing protein
Length = 191
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 26/167 (15%)
Query: 64 IAYILISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDET------------ 111
+A +LI L GD + I R+SRLW++ D NDE +++ LVLLD+
Sbjct: 1 MAEVLIPDLEQGDGNPTIIVRVSRLWEYRDQNDETIVHNISLVLLDKKVPSRNSSANCYP 60
Query: 112 --------------GASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANP 157
GASI IYP L F ++ +GKVY + + VR +R YRPV N
Sbjct: 61 YINVFSLSNSKSKQGASIAAYIYPPLDVVFGPIITEGKVYRLTFYRVRPCSRNYRPVNNR 120
Query: 158 LMISFTKWTTLEECIEIPDNFPSITFSLTPFQDVPSLVEKNHFYVGA 204
+ I+FTKWTTLEE +++P +FP +S TP+ ++ S V++ + G
Sbjct: 121 MSINFTKWTTLEEHLDVPADFPCYAYSPTPYNELRSHVDRKDSFTGT 167
>Os07g0642100 Nucleic acid-binding, OB-fold domain containing protein
Length = 145
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 49/53 (92%)
Query: 150 TYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPFQDVPSLVEKNHFYV 202
TYRPV NPLMISFTKWTTLEECI+ D+FP+ITFSLTPFQDVPSLV+KN FYV
Sbjct: 1 TYRPVTNPLMISFTKWTTLEECIDASDDFPAITFSLTPFQDVPSLVDKNAFYV 53
>Os11g0475900
Length = 1429
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 13 LPRRQLACGPPYLSFAFWID-SFVSSLSRPPLVLASSLLSHGVRGPLRPRLTIAYILISQ 71
L RRQ P + ++ I+ S +L R + L + +HG + ++LISQ
Sbjct: 861 LQRRQF---PVRVCYSMTINKSQGQTLQRVGVYLRRPVFTHGQLSKM------VHVLISQ 911
Query: 72 LLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLL 131
L GD++ +I R+SRLWDF D+ND I+HT +VLLD+ G SIH QIY + K LL
Sbjct: 912 LACGDLNTRILARVSRLWDFSDLNDSSNIFHTNVVLLDQMGKSIHAQIYHPVIGVLKPLL 971
Query: 132 QQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTT--LEECIEIPDNFPSITFSLTPFQ 189
Q+ KVYYIDSF+V V P ++ T L+ I+I D S T +T +
Sbjct: 972 QEQKVYYIDSFTVDVMG-VITEVGAPAIVRPKSRNTDSLKRTIQICDASNS-TLPVTLWG 1029
Query: 190 DVPSLVEKNHFY 201
D ++ + + Y
Sbjct: 1030 DKAAIFDADTIY 1041
>Os01g0175300 Nucleic acid-binding, OB-fold domain containing protein
Length = 523
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%)
Query: 69 ISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFK 128
I++L G I R+SR+W+F N+++ I H +LVLLD+ G +I+ +I P
Sbjct: 6 IAELRPGRYDYMICVRISRIWEFRGTNEDDNIKHLDLVLLDQKGDAIYAEIPPDAIPLLN 65
Query: 129 DLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPF 188
LQ+G + YI +V A +YR V NP MI K T + E + P +FP TF L F
Sbjct: 66 QYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTFDLVSF 125
Query: 189 QDVPSLVEKNHFYV 202
+ K ++
Sbjct: 126 DKLHDFTSKTDRFL 139
>Os03g0181900
Length = 552
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%)
Query: 69 ISQLLYGDISKQIKTRLSRLWDFHDINDEEKIYHTELVLLDETGASIHVQIYPSLRNKFK 128
I++L G I R+SR+W+F N+++ I H +LVLLD+ G +I+ +I P
Sbjct: 35 IAELRPGRYDYMICVRISRIWEFRGTNEDDNIKHLDLVLLDQKGDAIYAEIPPDAIPLLN 94
Query: 129 DLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEECIEIPDNFPSITFSLTPF 188
LQ+G + YI +V A +YR V NP MI K T + E + P +FP TF L F
Sbjct: 95 QYLQEGNIVYISKITVNNAKPSYRAVGNPYMIKLNKRTCIIEAKDQPMDFPKYTFDLVSF 154
Query: 189 QDVPSLVEKNHFYV 202
+ K ++
Sbjct: 155 DKLHDFTSKTDRFL 168
>Os01g0838100 Nucleic acid-binding, OB-fold domain containing protein
Length = 474
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 80/154 (51%), Gaps = 13/154 (8%)
Query: 48 SLLSHGVRGPLR-----PRLTIAYILISQLLYG---DISK-----QIKTRLSRLWDFHDI 94
+LLS G R R P ++++ + DIS +I+ +++R+WD+
Sbjct: 11 ALLSSGTRNGARKILLLPSAVSVTTFVAKMAFDLLCDISPASRGWKIRAKIARMWDYTGT 70
Query: 95 NDEEKIYHTELVLLDETGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPV 154
D+ H +LVL+DE G +++ +I +KF+ LLQ+ KVY F + + Y+P
Sbjct: 71 ADDLPPIHVDLVLIDEKGNAMYAEIPGVEADKFRPLLQESKVYTFSKFLILPSKPAYKPF 130
Query: 155 ANPLMISFTKWTTLEECIEIPDNFPSITFSLTPF 188
N MI T WT +E+ E+P +FPS F+L F
Sbjct: 131 PNKYMIKLTPWTNVEQVNEVPADFPSHVFNLVQF 164
>Os03g0855700 Nucleic acid-binding, OB-fold domain containing protein
Length = 599
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 56 GPLRPRLTIAYILISQLLYGDISKQ-----IKTRLSRLWDFHDINDEEKIYHTELVLLDE 110
G PRL +A + S L D++++ ++ R +R +F N+ +KI +LVLLDE
Sbjct: 44 GSCLPRLLLAKMDYS--LLKDVTQESHRWRVRVRATRFSEFTTANEPDKILRLDLVLLDE 101
Query: 111 TGASIHVQIYPSLRNKFKDLLQQGKVYYIDSFSVRYANRTYRPVANPLMISFTKWTTLEE 170
G + QI +FK LL++G VYYI F V A YRPV LM FT TT+ E
Sbjct: 102 QGDMMDAQIPGRRVVQFKPLLKEGAVYYIKYFEVAEARPQYRPVDRLLMAKFTAHTTVTE 161
Query: 171 CIEIPDNFPSITFSLTPFQDV 191
P FPS + F ++
Sbjct: 162 DTGPPSTFPSYACKILSFDEL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,018,411
Number of extensions: 317501
Number of successful extensions: 917
Number of sequences better than 1.0e-10: 34
Number of HSP's gapped: 917
Number of HSP's successfully gapped: 34
Length of query: 225
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 128
Effective length of database: 11,971,043
Effective search space: 1532293504
Effective search space used: 1532293504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)