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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0107100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.21 (0.0215) R2 : 0.000166
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0125 (0.0452) R2dN8 : 0.000215 R2N8 : 0.000166
σ : 0.404
deviance : 75.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.43 0.397 3.19 -0.0426 0.105 0.249 -0.131 -0.327 0.0558 7.08 1005 1855 -- --
71.66 0.394 3.19 -0.043 0.108 0.24 -0.142 -- 0.0482 7 1005 1855 -- --
71.47 0.394 3.19 -0.0444 0.105 0.25 -- -0.33 0.0558 6.96 1005 1855 -- --
71.72 0.394 3.19 -0.0453 0.108 0.241 -- -- 0.0487 6.94 1005 1855 -- --
72.04 0.395 3.2 -0.0431 -- 0.252 -- -0.353 0.0587 -- 1005 1855 -- --
74.34 0.404 3.21 -0.0343 0.108 -- -0.187 -- -0.0189 6.89 -- -- -- --
74.44 0.404 3.21 -0.0377 0.108 -- -- -- -0.0185 6.81 -- -- -- --
72.32 0.396 3.2 -0.0429 -- 0.241 -- -- 0.051 -- 1005 1855 -- --
71.77 0.395 3.19 -- 0.107 0.239 -- -- 0.0535 6.96 1005 1816 -- --
75.05 0.405 3.21 -0.0353 -- -- -- -- -0.0164 -- -- -- -- --
74.47 0.404 3.21 -- 0.108 -- -- -- -0.0143 6.83 -- -- -- --
72.37 0.396 3.2 -- -- 0.239 -- -- 0.0553 -- 1005 1816 -- --
75.08 0.404 3.21 -- -- -- -- -- -0.0125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.72 humidity 90.0 30 < th dose independent rect. 22 1
2 63.77 wind 9.0 1440 < th dose independent rect. 23 1
3 63.77 temperature 10.0 1440 > th dose independent rect. 23 1
6 63.77 temperature 30.0 1440 < th dose independent rect. 23 1
10 63.77 humidity 50.0 1440 > th dose independent rect. 23 1
20 63.77 atmosphere 995.0 1440 > th dose independent rect. 23 1
21 63.77 radiation 1.0 1440 < th dose independent rect. 23 1
41 63.77 temperature 10.0 1440 > th dose independent rect. 24 23
44 63.77 radiation 1.0 1440 < th dose dependent rect. 23 1
49 63.79 temperature 25.0 30 > th dose independent rect. 22 1
50 63.83 temperature 20.0 30 > th dose dependent rect. 22 1
52 63.84 humidity 90.0 30 < th dose dependent rect. 22 1
54 63.91 atmosphere 1005.0 30 > th dose dependent rect. 22 1
58 63.96 atmosphere 1005.0 30 > th dose independent rect. 22 1
62 64.01 precipitation 0.1 30 < th dose independent rect. 22 1
63 64.01 precipitation 0.1 30 < th dose dependent rect. 22 1
64 64.05 wind 1.0 30 > th dose independent rect. 22 1
65 64.05 wind 5.0 30 < th dose independent rect. 22 1
68 64.05 temperature 10.0 30 > th dose independent rect. 22 1
70 64.05 temperature 30.0 30 < th dose independent rect. 22 1
71 64.05 humidity 50.0 30 > th dose independent rect. 22 1
75 64.05 atmosphere 1010.0 30 < th dose independent rect. 22 1
77 64.05 radiation 1.0 30 < th dose independent rect. 22 1
82 64.05 temperature 10.0 30 > th dose independent rect. 23 23
83 64.05 radiation 1.0 30 < th dose dependent rect. 22 1
88 64.06 wind 9.0 30 < th dose dependent rect. 22 1
94 64.18 humidity 50.0 30 > th dose dependent rect. 22 1
96 64.24 wind 1.0 30 > th dose dependent rect. 22 1
101 64.43 atmosphere 1015.0 30 < th dose dependent rect. 22 1
103 64.82 temperature 30.0 30 < th dose dependent rect. 22 1
117 65.55 wind 9.0 30 < th dose independent rect. 23 23
171 69.75 atmosphere 995.0 30 > th dose independent rect. 23 23
172 69.76 temperature 25.0 10 > th dose independent rect. 20 3
178 70.24 humidity 90.0 30 < th dose independent rect. 20 3
184 70.84 humidity 80.0 14400 < th dose dependent rect. 7 1
187 70.96 precipitation 0.1 30 < th dose independent rect. 23 23
188 70.96 wind 1.0 1440 < th dose dependent rect. 8 4
189 70.96 precipitation 0.1 30 < th dose dependent rect. 23 23
190 70.97 temperature 25.0 90 > th dose dependent rect. 20 3
195 71.05 wind 1.0 1440 > th dose independent rect. 8 4
196 71.06 wind 1.0 1440 > th dose independent rect. 8 1
198 71.11 wind 1.0 1440 < th dose independent rect. 10 2
199 71.11 wind 1.0 1440 < th dose dependent rect. 10 1
200 71.13 radiation 10.0 30 < th dose independent rect. 10 2
201 71.14 wind 1.0 1440 < th dose independent rect. 8 1
202 71.14 wind 1.0 1440 < th dose independent rect. 8 4
203 71.16 wind 1.0 14400 < th dose dependent rect. 8 1
204 71.17 wind 1.0 1440 > th dose independent rect. 10 2
205 71.17 radiation 10.0 270 < th dose independent rect. 9 3
207 71.20 radiation 30.0 14400 > th dose independent rect. 15 1
209 71.20 humidity 80.0 14400 < th dose dependent rect. 4 5
212 71.22 atmosphere 1005.0 30 > th dose dependent rect. 20 3
234 71.28 wind 1.0 14400 < th dose independent rect. 8 1
235 71.28 atmosphere 1005.0 720 > th dose independent rect. 23 1
237 71.29 radiation 10.0 14400 > th dose independent rect. 17 13
242 71.34 atmosphere 1015.0 720 < th dose independent rect. 3 8
246 71.37 precipitation 0.1 720 < th dose independent rect. 15 8
249 71.37 precipitation 0.1 720 < th dose dependent rect. 15 8
253 71.38 wind 3.0 1440 < th dose independent rect. 6 9
254 71.38 wind 3.0 14400 < th dose dependent rect. 6 1
255 71.38 wind 1.0 14400 < th dose dependent rect. 1 2
257 71.39 wind 3.0 1440 < th dose dependent rect. 8 1
259 71.41 radiation 10.0 270 < th dose independent rect. 11 1
261 71.42 atmosphere 1005.0 90 > th dose independent rect. 23 20
262 71.43 atmosphere 995.0 43200 < th dose dependent rect. 18 5
263 71.44 wind 3.0 1440 > th dose independent rect. 6 9
268 71.47 humidity 80.0 43200 < th dose independent rect. 9 1
269 71.47 radiation 10.0 14400 > th dose independent rect. 17 1
272 71.47 humidity 80.0 30 > th dose independent rect. 20 3
278 71.47 temperature 10.0 720 > th dose independent rect. 15 8
285 71.47 temperature 10.0 720 > th dose independent rect. 23 16
287 71.48 temperature 10.0 720 > th dose independent rect. 3 8
288 71.48 atmosphere 995.0 720 > th dose independent rect. 3 8
289 71.48 temperature 10.0 720 > th dose independent rect. 11 16
291 71.48 wind 1.0 14400 < th dose dependent rect. 20 13
293 71.49 atmosphere 995.0 720 > th dose independent rect. 23 16
308 71.50 atmosphere 995.0 43200 < th dose dependent rect. 17 8
310 71.51 wind 9.0 720 < th dose independent rect. 3 8
313 71.52 atmosphere 1005.0 1440 < th dose independent rect. 19 14
317 71.53 wind 7.0 4320 < th dose dependent rect. 6 1
319 71.53 wind 1.0 14400 < th dose dependent rect. 4 8
322 71.54 wind 9.0 720 < th dose independent rect. 15 8
326 71.55 atmosphere 1005.0 1440 > th dose independent rect. 19 14
335 71.57 wind 3.0 4320 > th dose independent rect. 6 1
343 71.57 wind 1.0 14400 < th dose dependent rect. 4 5
353 71.59 atmosphere 995.0 43200 < th dose independent rect. 18 8
365 71.59 wind 3.0 1440 < th dose dependent rect. 6 6
368 71.60 precipitation 0.1 720 < th dose independent rect. 11 16
371 71.60 precipitation 0.1 720 < th dose dependent rect. 11 16
381 71.62 wind 3.0 4320 < th dose independent rect. 6 1
383 71.62 atmosphere 995.0 43200 > th dose independent rect. 19 3
384 71.62 atmosphere 1005.0 1440 < th dose independent rect. 5 4
398 71.63 humidity 70.0 14400 > th dose independent rect. 20 13
401 71.63 wind 3.0 1440 < th dose dependent rect. 6 9
403 71.64 atmosphere 1005.0 1440 > th dose independent rect. 5 1
404 71.64 atmosphere 995.0 43200 > th dose independent rect. 22 1
405 71.64 atmosphere 995.0 43200 < th dose independent rect. 21 1
408 71.64 radiation 10.0 270 < th dose independent rect. 9 1
419 71.64 atmosphere 1005.0 1440 > th dose independent rect. 4 5
428 71.64 atmosphere 995.0 43200 < th dose dependent rect. 21 1
442 71.65 atmosphere 1005.0 1440 < th dose independent sin 9 NA
444 71.65 atmosphere 1005.0 1440 < th dose independent rect. 5 1
449 71.65 atmosphere 995.0 43200 > th dose independent rect. 18 9
460 71.65 wind 1.0 4320 > th dose dependent rect. 6 1
462 71.65 wind 1.0 14400 < th dose dependent rect. 24 9
463 71.65 wind 1.0 14400 < th dose dependent rect. 24 11
509 71.68 atmosphere 1005.0 1440 > th dose independent sin 9 NA
545 71.70 atmosphere 1005.0 1440 < th dose independent rect. 7 2
579 71.72 wind 1.0 1440 < th dose independent rect. 14 1
581 71.72 humidity 70.0 14400 > th dose independent rect. 5 4
590 71.72 humidity 50.0 720 > th dose independent rect. 3 8
599 71.72 wind 5.0 1440 < th dose dependent rect. 14 1
604 71.73 atmosphere 1005.0 1440 < th dose independent rect. 22 3
640 71.74 atmosphere 1005.0 270 > th dose independent rect. 23 18
642 71.74 wind 1.0 14400 < th dose dependent sin 9 NA
643 71.74 wind 1.0 90 < th dose dependent rect. 11 2
646 71.75 wind 5.0 1440 < th dose independent rect. 14 1
647 71.75 humidity 70.0 14400 > th dose independent rect. 8 1
675 71.76 wind 5.0 30 < th dose independent rect. 20 3
695 71.76 humidity 70.0 43200 > th dose dependent rect. 8 2
722 71.77 atmosphere 995.0 30 > th dose dependent rect. 23 21
725 71.78 wind 1.0 90 < th dose independent rect. 11 2
758 71.79 temperature 25.0 4320 > th dose independent rect. 21 1
763 71.79 precipitation 0.1 1440 < th dose independent rect. 23 1
780 71.79 precipitation 0.1 1440 < th dose dependent rect. 23 1
785 71.80 temperature 25.0 4320 < th dose independent rect. 21 1
816 71.81 wind 3.0 1440 < th dose independent rect. 10 5
843 71.82 wind 1.0 14400 > th dose independent rect. 8 1
849 71.82 wind 3.0 1440 > th dose independent rect. 10 5
876 71.83 wind 5.0 1440 > th dose independent rect. 14 1
878 71.83 wind 1.0 30 > th dose independent rect. 20 3
890 71.83 radiation 40.0 720 < th dose independent rect. 15 8
934 71.84 atmosphere 1005.0 1440 > th dose independent rect. 13 20
936 71.84 atmosphere 1005.0 1440 < th dose independent rect. 3 23
941 71.85 atmosphere 1005.0 1440 < th dose independent no NA NA
943 71.85 atmosphere 1005.0 1440 > th dose independent rect. 20 1
981 71.86 atmosphere 1005.0 30 > th dose independent rect. 23 12
988 71.86 atmosphere 1005.0 1440 < th dose independent rect. 22 23
997 71.87 humidity 80.0 14400 < th dose independent rect. 7 1
999 71.87 atmosphere 1005.0 30 > th dose independent rect. 20 3
1000 71.87 humidity 90.0 4320 > th dose independent rect. 5 4