Os07g0651500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF889, eukaryote family protein.
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Os07g0651500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF889, eukaryote family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.38 | 0.58 | 3.48 | -0.0182 | 0.123 | 0.786 | 0.305 | 3.23 | -0.175 | 6.39 | 5 | 1 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 160.44 | 0.594 | 3.48 | 0.0355 | 0.0652 | -- | 0.609 | -- | -0.174 | 3.57 | -- | -- | -- | -- |
| 161.08 | 0.594 | 3.48 | 0.0257 | 0.12 | -- | -- | -- | -0.178 | 6.9 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 161.84 | 0.594 | 3.48 | 0.0282 | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
| 161.1 | 0.594 | 3.48 | -- | 0.12 | -- | -- | -- | -0.181 | 6.89 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 161.86 | 0.594 | 3.48 | -- | -- | -- | -- | -- | -0.179 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.18 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 7 |
| 2 | 150.22 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 4 | 150.28 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 10 | 18 |
| 6 | 150.54 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 14 | 1 |
| 9 | 150.78 | atmosphere | 1015 | 90 | < th | dose independent | rect. | 9 | 23 |
| 11 | 150.80 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 16 |
| 12 | 150.83 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 6 | 16 |
| 13 | 150.87 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 20 | 8 |
| 14 | 150.94 | wind | 7 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 18 | 151.06 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 20 | 16 |
| 19 | 151.16 | atmosphere | 1015 | 10 | < th | dose independent | rect. | 11 | 23 |
| 20 | 151.17 | atmosphere | 1015 | 90 | < th | dose independent | rect. | 1 | 23 |
| 23 | 151.34 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 24 | 23 |
| 24 | 151.42 | atmosphere | 1015 | 270 | < th | dose independent | rect. | 7 | 23 |
| 25 | 151.46 | wind | 7 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 26 | 151.46 | wind | 7 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 34 | 151.71 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 16 | 23 |
| 36 | 151.76 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 10 | 23 |
| 37 | 151.82 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 10 | 15 |
| 41 | 151.95 | atmosphere | 1015 | 10 | < th | dose independent | sin | 13 | NA |
| 45 | 151.95 | atmosphere | 1015 | 10 | < th | dose independent | sin | 1 | NA |
| 48 | 151.95 | atmosphere | 1015 | 270 | < th | dose independent | sin | 3 | NA |
| 67 | 152.00 | atmosphere | 1015 | 10 | < th | dose independent | sin | 23 | NA |
| 85 | 152.05 | atmosphere | 1015 | 10 | < th | dose independent | rect. | 21 | 23 |
| 105 | 152.15 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 14 | 2 |
| 108 | 152.17 | atmosphere | 1015 | 720 | < th | dose independent | sin | 21 | NA |
| 117 | 152.20 | humidity | 50 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 151 | 152.20 | humidity | 50 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 208 | 152.24 | atmosphere | 1015 | 720 | < th | dose independent | rect. | 5 | 23 |
| 240 | 152.37 | atmosphere | 1015 | 720 | > th | dose independent | rect. | 20 | 3 |
| 275 | 152.37 | atmosphere | 1015 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 296 | 152.38 | atmosphere | 1015 | 10 | > th | dose independent | sin | 7 | NA |
| 392 | 152.38 | atmosphere | 1015 | 10 | > th | dose independent | no | NA | NA |
| 399 | 152.38 | atmosphere | 1015 | 10 | < th | dose independent | no | NA | NA |
| 403 | 152.38 | atmosphere | 1015 | 270 | > th | dose independent | rect. | 20 | 1 |
| 409 | 152.38 | atmosphere | 1015 | 10 | > th | dose independent | rect. | 23 | 1 |