BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0449900 Os05g0449900|AK068138
(315 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0449900 Homeodomain-like containing protein 582 e-166
Os01g0853700 Similar to MCB1 protein 339 2e-93
Os01g0142500 Homeodomain-like containing protein 249 2e-66
Os04g0676700 Similar to MCB1 protein 166 2e-41
Os01g0524500 Similar to Transcription factor MYBS3 159 2e-39
Os05g0442400 Similar to MybSt1 151 5e-37
Os01g0863300 Similar to MCB2 protein 135 3e-32
Os04g0341900 131 7e-31
Os01g0603300 Similar to MCB2 protein 119 4e-27
Os05g0195700 Similar to Transcription factor MYBS2 118 5e-27
Os01g0192300 Similar to I-box binding factor (Fragment) 118 5e-27
Os10g0562100 Homeodomain-like containing protein 117 9e-27
AK105558 112 3e-25
Os05g0589400 Similar to I-box binding factor (Fragment) 111 6e-25
Os10g0561400 Similar to Transcription factor MYBS3 108 7e-24
Os08g0151000 Similar to MCB1 protein 106 2e-23
Os01g0187900 Similar to Transcription factor MYBS2 106 3e-23
Os08g0144000 Zinc finger, CCHC-type domain containing protein 105 5e-23
Os06g0173400 92 4e-19
Os06g0173300 91 8e-19
Os06g0173200 84 1e-16
Os05g0442200 83 2e-16
Os02g0511200 79 6e-15
Os03g0837200 78 7e-15
Os06g0173800 71 8e-13
Os06g0174100 71 1e-12
Os05g0579600 Homeodomain-like containing protein 67 2e-11
Os01g0635200 Homeodomain-like containing protein 65 5e-11
Os05g0579700 65 6e-11
Os05g0567600 64 1e-10
>Os05g0449900 Homeodomain-like containing protein
Length = 315
Score = 582 bits (1499), Expect = e-166, Method: Compositional matrix adjust.
Identities = 294/315 (93%), Positives = 294/315 (93%)
Query: 1 MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP 60
MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP
Sbjct: 1 MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP 60
Query: 61 ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYXXXXXXXXXXFTLDWDGG 120
ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHY FTLDWDGG
Sbjct: 61 ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYGAAGGGGGSGFTLDWDGG 120
Query: 121 DDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNF 180
DDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNF
Sbjct: 121 DDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNF 180
Query: 181 VTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPPSVLTXX 240
VTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPPSVLT
Sbjct: 181 VTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPPSVLTAH 240
Query: 241 XXXXXXXXXEQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQVKIEAGNSHVAGGGRLDDS 300
EQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQVKIEAGNSHVAGGGRLDDS
Sbjct: 241 SSSSAAAVSEQFGVLVDGKPPPPPLGRGAGHHHFMPHPYAQVKIEAGNSHVAGGGRLDDS 300
Query: 301 VLVQMQCGQLMQPLG 315
VLVQMQCGQLMQPLG
Sbjct: 301 VLVQMQCGQLMQPLG 315
>Os01g0853700 Similar to MCB1 protein
Length = 299
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 218/323 (67%), Gaps = 37/323 (11%)
Query: 1 MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP 60
MM E+ EVLP YF GQ W+L +RRG AWS EENKVFE+ALA +D + P
Sbjct: 1 MMAEALREVLP---LPYFPGQPC----WYLQERRGAE-AWSAEENKVFERALAQVDLDSP 52
Query: 61 ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYXXXXXXXXXXFTL-DWDG 119
RWE VA +LP KTV DVM HY DLENDV IEAGLVPFPHY FTL DWDG
Sbjct: 53 NRWEMVAAMLPRKTVIDVMNHYRDLENDVGSIEAGLVPFPHYSSSLSPASSGFTLQDWDG 112
Query: 120 GDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRN 179
D GF+R CY+ KR R PDQERKKGVPWTEEEHK FLMGLKKYGRGDWRNISR
Sbjct: 113 SDG----GFRRGCYL---KRGRAPDQERKKGVPWTEEEHKSFLMGLKKYGRGDWRNISRY 165
Query: 180 FVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPPSVLTX 239
FVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLP++D NPSPSPP + T
Sbjct: 166 FVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPEEDTSNPSPSPPSVLTT- 224
Query: 240 XXXXXXXXXXEQFGVLVDGKPPPPPLGRGAGHHHFMP---------HPYAQVKIEAGNSH 290
+Q G LVD KP PPP GA H P HPY VK+E S
Sbjct: 225 --------ASDQLGSLVDTKPVPPPPSLGAQRHFMSPLPGALGVSHHPYGNVKLEPNASF 276
Query: 291 VAGGGR---LDDSVLVQMQCGQL 310
+AGGG LDD++L+QMQCG L
Sbjct: 277 LAGGGTGPGLDDAILLQMQCGHL 299
>Os01g0142500 Homeodomain-like containing protein
Length = 294
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 169/266 (63%), Gaps = 26/266 (9%)
Query: 1 MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEENKVFEQALAALDRNDP 60
MM++ MEVLPP HY A+ G WF+ + WS EENK FE+ALA LD P
Sbjct: 2 MMRDVCMEVLPPMD-HY-----ASRGNWFMARK------WSPEENKQFERALAGLDLRCP 49
Query: 61 ERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYXXXXXXXXXXFTLDWDGG 120
+ W+RVA +PG++ +VM H+ DLE DV IE G+VPFP Y FTL WDG
Sbjct: 50 D-WDRVARAIPGRSALEVMNHFRDLELDVQQIENGMVPFPVYGAAAAGGA--FTLQWDGA 106
Query: 121 DDPAGLGFKRSCYMVGG----KR--ARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWR 174
G+G R+ Y GG KR R P+QERKKGVPWTEEEHKLFL+GLKKYG+GDWR
Sbjct: 107 H---GVGDFRNAYRFGGGGGGKRHFGRTPEQERKKGVPWTEEEHKLFLLGLKKYGKGDWR 163
Query: 175 NISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDDDHGNPSPSPPP 234
NISRNFV +RTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNL DD PSPS
Sbjct: 164 NISRNFVQTRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLTDDRP--PSPSQSS 221
Query: 235 SVLTXXXXXXXXXXXEQFGVLVDGKP 260
+ F D KP
Sbjct: 222 LISNQSNTSTLTAAVAPFSSTADVKP 247
>Os04g0676700 Similar to MCB1 protein
Length = 318
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 140/263 (53%), Gaps = 36/263 (13%)
Query: 40 WSQEENKVFEQALAALDRNDPE---RWERVALLLPGKTVADVMTHYDDLENDVCFIEAGL 96
W++E K FE ALA + ++ E WE++A + GKT +V HY+ L DV IEAG
Sbjct: 33 WTREREKAFENALATVGDDEEEGDGLWEKLAEAVEGKTADEVRRHYELLVEDVDGIEAGR 92
Query: 97 VPFPHYXXXXXXXXXXFTLDWDGGDDPAGLGFKRSCYMVGGK----------RARGPDQE 146
VP Y DGG + G + GG A+ +QE
Sbjct: 93 VPLLVYAG-------------DGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQE 139
Query: 147 RKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKD 206
R+KG+ WTE+EH+LFL+GL+KYG+GDWR+ISRNFV SRTPTQVASHAQKYFIRLNS ++
Sbjct: 140 RRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRE 199
Query: 207 KRRSSIHDITTVNLPDDDHGN---------PSPSPPPSVLTXXXXXXXXXXXEQFGVLVD 257
+RRSSIHDIT+VN D PS +P S + +G +
Sbjct: 200 RRRSSIHDITSVNNGDTSAAQGPITGQPNGPSANPGKSSKQSLQPANAPPGVDAYGTTI- 258
Query: 258 GKPPPPPLGRGAGHHHFMPHPYA 280
G+P PL G +P P A
Sbjct: 259 GQPVGGPLVSAVGTPVTLPVPAA 281
>Os01g0524500 Similar to Transcription factor MYBS3
Length = 284
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 113/196 (57%), Gaps = 35/196 (17%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPG-KTVADVMTHYDDLENDVCFIEAGLVP 98
W++E++K FE ALAA +PG ++ +V HY+ L DV I+AG VP
Sbjct: 18 WTREDDKAFENALAAS--------------VPGARSAEEVRRHYEALVEDVAAIDAGRVP 63
Query: 99 FPHYXXXXXXXXXXFTL-----DWDGG-------DDPAGLGFKRSCYMVGGKRARGPDQE 146
P Y DGG G +SC +QE
Sbjct: 64 LPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGGYDGGKSCSKA--------EQE 115
Query: 147 RKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKD 206
R+KG+PWTEEEH+LFL+GL K+G+GDWR+ISRNFV SRTPTQVASHAQKYFIRLNS +D
Sbjct: 116 RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 175
Query: 207 KRRSSIHDITTVNLPD 222
+RRSSIHDIT+V D
Sbjct: 176 RRRSSIHDITSVTAGD 191
>Os05g0442400 Similar to MybSt1
Length = 182
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/180 (48%), Positives = 106/180 (58%), Gaps = 28/180 (15%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPF 99
WS+ E+KVFE AL A + RW VA LPG++ +V HY L +DV IE G+V
Sbjct: 28 WSKAEDKVFESALVAFPEHTHNRWALVASRLPGRSAHEVWEHYQVLVDDVDLIERGMVAS 87
Query: 100 PHYXXXXXXXXXXFTLDWDGGDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHK 159
P WD ++ AG G R G D ER++GVPWTEEEH+
Sbjct: 88 PGC--------------WDDDNNSAGHG-----------RGSGGD-ERRRGVPWTEEEHR 121
Query: 160 LFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGK--DKRRSSIHDITT 217
LFL GL+KYGRGDWRNISR V +RTPTQVASHAQK+FIR + D +R SIHDIT
Sbjct: 122 LFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQANASSRGDSKRKSIHDITA 181
>Os01g0863300 Similar to MCB2 protein
Length = 148
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 95/179 (53%), Gaps = 50/179 (27%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPF 99
WS+ E+KVFE AL + P+RW VA LPG+T + + HY L D+ I G
Sbjct: 18 WSKVEDKVFESALVLCPEDVPDRWALVAAQLPGRTPQEALEHYQVLVADIDLIMRG---- 73
Query: 100 PHYXXXXXXXXXXFTLDWDGGDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHK 159
ER++GVPW+E+EH+
Sbjct: 74 ---------------------------------------------AERRRGVPWSEDEHR 88
Query: 160 LFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIR-LNSGGKDKRRSSIHDITT 217
LFL GL +YGRGDWRNISR V +RTPTQVASHAQKYFIR N+G +D +R SIHDITT
Sbjct: 89 LFLEGLDRYGRGDWRNISRFSVRTRTPTQVASHAQKYFIRQANAGARDSKRKSIHDITT 147
>Os04g0341900
Length = 201
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 70/79 (88%)
Query: 144 DQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSG 203
+QER+KG+PWTEEEH+LFL+GL K+G+GD +ISRNFV SRTPTQVASHAQKYFIRLNS
Sbjct: 99 EQERRKGIPWTEEEHRLFLLGLDKFGKGDLHSISRNFVISRTPTQVASHAQKYFIRLNSM 158
Query: 204 GKDKRRSSIHDITTVNLPD 222
+D+RRSSIHDIT+V D
Sbjct: 159 NRDRRRSSIHDITSVTAGD 177
>Os01g0603300 Similar to MCB2 protein
Length = 301
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Query: 122 DPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFV 181
D GL + Y+ G R QERKKGVPW+EEEH+LFL+GL+K G+GDWR ISR++V
Sbjct: 105 DEGGLERASNGYLSDGPHGR-IVQERKKGVPWSEEEHRLFLVGLEKLGKGDWRGISRSYV 163
Query: 182 TSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTV 218
T+RTPTQVASHAQK+F+R +S GK KRRSS+ D+ +
Sbjct: 164 TTRTPTQVASHAQKFFLRQSSIGKKKRRSSLFDMVPI 200
>Os05g0195700 Similar to Transcription factor MYBS2
Length = 287
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 142 GPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLN 201
G QERKKGVPWTEEEH++FL GL K G+GDWR ISR+FVT+RTPTQVASHAQKYF+R N
Sbjct: 114 GRVQERKKGVPWTEEEHQMFLAGLDKLGKGDWRGISRHFVTTRTPTQVASHAQKYFLRQN 173
Query: 202 SGGKDKRRSSIHDIT 216
S + KRRSS+ D+
Sbjct: 174 SMTQKKRRSSLFDVV 188
>Os01g0192300 Similar to I-box binding factor (Fragment)
Length = 310
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 68/83 (81%), Gaps = 2/83 (2%)
Query: 133 YMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASH 192
Y+ G AR QERKKGVPWTEEEH+ FL+GL+K G+GDWR ISR+FVT+RTPTQVASH
Sbjct: 108 YLSDGLMARA--QERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRHFVTTRTPTQVASH 165
Query: 193 AQKYFIRLNSGGKDKRRSSIHDI 215
AQKYF+R +S + KRRSS+ D+
Sbjct: 166 AQKYFLRQSSLTQKKRRSSLFDV 188
>Os10g0562100 Homeodomain-like containing protein
Length = 265
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 138 KRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYF 197
KR R QERKKGVPWTEEEHK FL GL++ G+GDWR IS+NFVTSRT TQVASHAQKYF
Sbjct: 86 KRRRRKVQERKKGVPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYF 145
Query: 198 IRLNSGGKDKRRSSIHDITTVNLPDDDHGNP 228
+R + GK KRR+S+ D+ DD +P
Sbjct: 146 LRQTNPGKKKRRASLFDV-VAECSDDQLPSP 175
>AK105558
Length = 90
Score = 112 bits (280), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/74 (67%), Positives = 61/74 (82%), Gaps = 4/74 (5%)
Query: 150 GVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRR 209
GVPWTEEEH+ FL+GL+K G+GDWR ISRNFV SRTPTQVASHAQKYFIR ++ + KRR
Sbjct: 10 GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRR 69
Query: 210 SSIHDITTVNLPDD 223
SS+ D+ +PD+
Sbjct: 70 SSLFDM----VPDE 79
>Os05g0589400 Similar to I-box binding factor (Fragment)
Length = 270
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 64/74 (86%), Gaps = 3/74 (4%)
Query: 145 QERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGG 204
+ERKKGVPW+E+EH+LFL GL+K G+GDWR ISR+FVT+RTPTQVASHAQK+F+R NS
Sbjct: 113 RERKKGVPWSEQEHRLFLAGLEKLGKGDWRGISRSFVTTRTPTQVASHAQKFFLRHNSAA 172
Query: 205 K---DKRRSSIHDI 215
K +KRRSS+ D+
Sbjct: 173 KKTNNKRRSSLFDM 186
>Os10g0561400 Similar to Transcription factor MYBS3
Length = 234
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Query: 148 KKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDK 207
+ GVPWTEEEH+ FL+GL+K G+GDWR ISRNFV SRTPTQVASHAQKYFIR ++ + K
Sbjct: 7 EAGVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRK 66
Query: 208 RRSSIHDITTVNLPDDDHGNP 228
RRSS+ D+ +PD+ P
Sbjct: 67 RRSSLFDM----VPDESMDLP 83
>Os08g0151000 Similar to MCB1 protein
Length = 295
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 150 GVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRR 209
VPWTEEEH+ FL GL+K G+GDWR IS+NFVT+RTPTQVASHAQKYF+R + K KRR
Sbjct: 7 AVPWTEEEHRTFLAGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQTNPNKKKRR 66
Query: 210 SSIHDITTVNL 220
SS+ D+ ++
Sbjct: 67 SSLFDMMATDM 77
>Os01g0187900 Similar to Transcription factor MYBS2
Length = 366
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 146 ERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIR 199
ERKKG PWTEEEH++FLMGL+K G+GDWR ISRNFV SRTPTQVASHAQKYFIR
Sbjct: 103 ERKKGTPWTEEEHRMFLMGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIR 156
>Os08g0144000 Zinc finger, CCHC-type domain containing protein
Length = 383
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 58/73 (79%)
Query: 144 DQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSG 203
D+ RK+G W+EEEHK FL+GL K G+GDWR ISRN+V SRTPTQVASHAQKYFIR +
Sbjct: 96 DKRRKRGEAWSEEEHKKFLLGLSKLGKGDWRGISRNYVGSRTPTQVASHAQKYFIRQTNV 155
Query: 204 GKDKRRSSIHDIT 216
+ KRRSS+ D+
Sbjct: 156 HRRKRRSSLFDMV 168
>Os06g0173400
Length = 331
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 136 GGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQK 195
GG+R R + WT EEH+ FL GL+ YGRG+W++IS NFV S+TP QV+SHAQK
Sbjct: 107 GGRRHRAAPTNTTRRF-WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQK 165
Query: 196 YFIRLNSGGKDKRRSSIHDI 215
YF R+ S DK+R SI+D+
Sbjct: 166 YFRRVESAAADKQRYSINDV 185
>Os06g0173300
Length = 394
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 136 GGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQK 195
GG+ P ++ WT EEH+ FL GL+ YGRG+W++IS NFV S+TP QV+SHAQK
Sbjct: 171 GGRHRAAPTNTTRRF--WTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQK 228
Query: 196 YFIRLNSGGKDKRRSSIHDI 215
YF R+ S DK+R SI+D+
Sbjct: 229 YFRRVESAAADKQRYSINDV 248
>Os06g0173200
Length = 321
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 50/58 (86%)
Query: 148 KKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGK 205
K+ V WTEEEH+LF++GL+ +GRGDW+NIS++ VT+RT QV+SHAQK+F+++ + G+
Sbjct: 173 KRRVIWTEEEHRLFMVGLRVFGRGDWKNISKHLVTTRTAAQVSSHAQKFFLKMEARGE 230
>Os05g0442200
Length = 133
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 67/133 (50%), Gaps = 25/133 (18%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPF 99
WS+ E+KVFE AL A + RW VA LPG++ +V HY L +DV IE G+V
Sbjct: 26 WSKAEDKVFESALVAFPEHTHNRWAIVASRLPGRSAHEVWEHYRVLVDDVDLIERGMVAS 85
Query: 100 PHYXXXXXXXXXXFTLDWDGGDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHK 159
P G + +RG D ER++GVPWTEEEH+
Sbjct: 86 P------------------------GCWDDGAGRGGAQGASRGGD-ERRRGVPWTEEEHR 120
Query: 160 LFLMGLKKYGRGD 172
LFL GL+KY RGD
Sbjct: 121 LFLEGLEKYRRGD 133
>Os02g0511200
Length = 276
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 130 RSCYMVGGKRARGPDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQV 189
R M GG GP RKK WT EEH FL G+ YG+G+W+ ++ FV +++ TQ+
Sbjct: 160 RKTRMAGG----GP---RKKAEMWTREEHSQFLHGISTYGKGNWKALASEFVKTKSSTQI 212
Query: 190 ASHAQKYFIRLNSGGKDK-RRSSIHDI----TTVNLPDDDHGNPSPSPPPSVL 237
ASH QK+ IR K +R+SIHDI TT + P+ PS PP L
Sbjct: 213 ASHYQKFCIREEKRRLSKCKRASIHDIVSPTTTTSAPES--AGAGPSAPPCAL 263
>Os03g0837200
Length = 212
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 146 ERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGK 205
E+K G+ W+EEEH+ L G+++ G G W IS +V SRTP Q+ASH QKYF+R+ +
Sbjct: 125 EKKSGI-WSEEEHRQCLRGIEEIGHGRWTQISIEYVPSRTPIQIASHTQKYFLRMAKPKE 183
Query: 206 DKRRSSIHD 214
D++R SIHD
Sbjct: 184 DRKRKSIHD 192
>Os06g0173800
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 151 VPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYF 197
V WT+ EH+LFL G++ YGRGDWRNISR FV S+TP Q++ +A YF
Sbjct: 132 VLWTDYEHRLFLTGMRVYGRGDWRNISRYFVRSKTPEQISMYADNYF 178
>Os06g0174100
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 151 VPWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYF 197
V WT+ EH+LFL G++ YGRGDWRNI+R FV S+TP QV+ +A YF
Sbjct: 176 VLWTDYEHRLFLTGMRVYGRGDWRNIARYFVGSKTPEQVSMYADNYF 222
>Os05g0579600 Homeodomain-like containing protein
Length = 90
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLL-PGKTVADVMTHYDDLENDVCFIEAGLVP 98
W Q++NK+FEQALA D+ P+RW +A + GK+ DV +Y+ LE D+ IE+G VP
Sbjct: 9 WPQKQNKLFEQALAVYDKETPDRWHNIARAVGGGKSAEDVKRYYEMLEEDIKHIESGKVP 68
Query: 99 FPHY 102
FP Y
Sbjct: 69 FPAY 72
>Os01g0635200 Homeodomain-like containing protein
Length = 85
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPF 99
W+ +N+ FE+ALA DR+ PERW +A + GK+ +V +YD L DV IE G VPF
Sbjct: 14 WTARQNEQFERALAVYDRDTPERWHNIARAVAGKSADEVKLYYDLLVEDVKRIETGKVPF 73
Query: 100 PHY 102
P Y
Sbjct: 74 PAY 76
>Os05g0579700
Length = 111
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPGKTVAD-VMTHYDDLENDVCFIEAGLVP 98
W+Q +NK FE ALA D+ P+RW +A + G AD V H+D L DV IE+G VP
Sbjct: 27 WTQRQNKQFECALAVYDKETPDRWHNIARYMGGAKSADEVRRHFDHLVEDVSRIESGRVP 86
Query: 99 FPHY 102
FP Y
Sbjct: 87 FPRY 90
>Os05g0567600
Length = 85
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 40 WSQEENKVFEQALAALDRNDPERWERVALLLPG-KTVADVMTHYDDLENDVCFIEAGLVP 98
WS++ENK+FE+ALA + P RW++VA + G K+ ++ HY+DL +DV IE+G V
Sbjct: 15 WSRKENKMFEEALAYYGEDTPNRWDKVASAMGGIKSAEEIRCHYEDLTDDVKTIESGRVQ 74
Query: 99 FPHY 102
FP Y
Sbjct: 75 FPKY 78
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.139 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,390,400
Number of extensions: 764910
Number of successful extensions: 3586
Number of sequences better than 1.0e-10: 30
Number of HSP's gapped: 3578
Number of HSP's successfully gapped: 30
Length of query: 315
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 214
Effective length of database: 11,762,187
Effective search space: 2517108018
Effective search space used: 2517108018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)